Mercurial > repos > earlhaminst > ete

changeset 14:d40b9a7debe5 draft default tip

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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/ete commit 71b9c1035f713be174bfcf5ecb20804495f39258
author earlhaminst
date Thu, 07 Mar 2024 19:39:30 +0000
parents ed74587a13c8
children
files ete_gene_cnv.xml ete_genetree_splitter.xml ete_homology_classifier.xml ete_init_taxdb.xml ete_lineage_generator.xml ete_macros.xml ete_mod.xml ete_species_tree_generator.xml
diffstat 8 files changed, 12 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/ete_gene_cnv.xml	Thu Sep 01 16:11:32 2022 +0000
+++ b/ete_gene_cnv.xml	Thu Mar 07 19:39:30 2024 +0000
@@ -3,6 +3,7 @@
     <macros>
         <import>ete_macros.xml</import>
     </macros>
+    <expand macro="bio_tools"/>
     <expand macro="requirements" />
     <command detect_errors="exit_code"><![CDATA[
 python '$__tool_directory__/ete_gene_cnv.py'
--- a/ete_genetree_splitter.xml	Thu Sep 01 16:11:32 2022 +0000
+++ b/ete_genetree_splitter.xml	Thu Mar 07 19:39:30 2024 +0000
@@ -3,6 +3,7 @@
     <macros>
         <import>ete_macros.xml</import>
     </macros>
+    <expand macro="bio_tools"/>
     <expand macro="requirements" />
     <stdio>
         <!-- Anything other than zero is an error -->
--- a/ete_homology_classifier.xml	Thu Sep 01 16:11:32 2022 +0000
+++ b/ete_homology_classifier.xml	Thu Mar 07 19:39:30 2024 +0000
@@ -12,6 +12,7 @@
             </param>
         </xml>
     </macros>
+    <expand macro="bio_tools"/>
     <expand macro="requirements" />
     <command detect_errors="exit_code">
     <![CDATA[
--- a/ete_init_taxdb.xml	Thu Sep 01 16:11:32 2022 +0000
+++ b/ete_init_taxdb.xml	Thu Mar 07 19:39:30 2024 +0000
@@ -3,6 +3,7 @@
     <macros>
         <import>ete_macros.xml</import>
     </macros>
+    <expand macro="bio_tools"/>
     <expand macro="requirements" />
     <command detect_errors="exit_code"><![CDATA[
 python '$__tool_directory__/ete_init_taxdb.py'
--- a/ete_lineage_generator.xml	Thu Sep 01 16:11:32 2022 +0000
+++ b/ete_lineage_generator.xml	Thu Mar 07 19:39:30 2024 +0000
@@ -3,6 +3,7 @@
     <macros>
         <import>ete_macros.xml</import>
     </macros>
+    <expand macro="bio_tools"/>
     <expand macro="requirements" />
     <command detect_errors="exit_code"><![CDATA[
 python '$__tool_directory__/ete_lineage_generator.py'
--- a/ete_macros.xml	Thu Sep 01 16:11:32 2022 +0000
+++ b/ete_macros.xml	Thu Mar 07 19:39:30 2024 +0000
@@ -1,6 +1,11 @@
 <?xml version="1.0"?>
 <macros>
     <token name="@VERSION@">3.1.2</token>
+    <xml name="bio_tools">
+        <xrefs>
+            <xref type="bio.tools">ete</xref>
+        </xrefs>
+    </xml>
     <xml name="requirements">
         <requirements>
             <requirement type="package" version="@VERSION@">ete3</requirement>
--- a/ete_mod.xml	Thu Sep 01 16:11:32 2022 +0000
+++ b/ete_mod.xml	Thu Mar 07 19:39:30 2024 +0000
@@ -3,6 +3,7 @@
     <macros>
         <import>ete_macros.xml</import>
     </macros>
+    <expand macro="bio_tools"/>
     <expand macro="requirements" />
     <command detect_errors="exit_code"><![CDATA[
 ete3 mod -t
--- a/ete_species_tree_generator.xml	Thu Sep 01 16:11:32 2022 +0000
+++ b/ete_species_tree_generator.xml	Thu Mar 07 19:39:30 2024 +0000
@@ -3,6 +3,7 @@
     <macros>
         <import>ete_macros.xml</import>
     </macros>
+    <expand macro="bio_tools"/>
     <expand macro="requirements" />
     <stdio>
         <!-- Anything other than zero is an error -->