Mercurial > repos > earlhaminst > geneseqtofamily
annotate GeneSeqToFamily.ga @ 4:cc5419f7dff7 draft
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
author | earlhaminst |
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date | Mon, 27 Nov 2017 11:04:05 -0500 |
parents | 58c9294400ed |
children | 266800d51605 |
rev | line source |
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0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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1 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
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changeset
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2 "a_galaxy_workflow": "true", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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3 "annotation": "", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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4 "format-version": "0.1", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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5 "name": "GeneSeqToFamily", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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6 "steps": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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7 "0": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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8 "annotation": "", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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9 "content_id": null, |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
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10 "errors": null, |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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11 "id": 0, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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12 "input_connections": {}, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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13 "inputs": [ |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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14 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
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15 "description": "", |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
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16 "name": "CDS" |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
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changeset
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17 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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18 ], |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
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19 "label": "CDS", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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20 "name": "Input dataset", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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21 "outputs": [], |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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22 "position": { |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
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23 "left": 200, |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
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24 "top": 266 |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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25 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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26 "tool_id": null, |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
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27 "tool_state": "{\"name\": \"CDS\"}", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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28 "tool_version": null, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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29 "type": "data_input", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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30 "uuid": "d2777a78-6429-47f6-9567-cb15140ace8d", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
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changeset
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31 "workflow_outputs": [ |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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32 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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33 "label": null, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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34 "output_name": "output", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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35 "uuid": "7eedd485-b41e-4b55-9359-9f7e56d84f54" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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36 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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37 ] |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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38 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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39 "1": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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40 "annotation": "", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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41 "content_id": null, |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
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42 "errors": null, |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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43 "id": 1, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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44 "input_connections": {}, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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45 "inputs": [ |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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46 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
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47 "description": "", |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
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48 "name": "Gene feature information" |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
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49 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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50 ], |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
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51 "label": "Gene feature information", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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52 "name": "Input dataset", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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53 "outputs": [], |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
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54 "position": { |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
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55 "left": 202.8125, |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
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56 "top": 469.0625 |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
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57 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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58 "tool_id": null, |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
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59 "tool_state": "{\"name\": \"Gene feature information\"}", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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60 "tool_version": null, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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61 "type": "data_input", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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62 "uuid": "3fbf4a09-9207-4a18-a133-0d865f9614f6", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
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63 "workflow_outputs": [ |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
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64 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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65 "label": null, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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66 "output_name": "output", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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67 "uuid": "39787c6d-ecd8-4147-b718-83d739202b3b" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
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68 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
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69 ] |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
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70 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
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71 "2": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
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72 "annotation": "", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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73 "content_id": null, |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
74 "errors": null, |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
75 "id": 2, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
76 "input_connections": {}, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
77 "inputs": [ |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
78 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
79 "description": "", |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
80 "name": "Species tree" |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
81 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
82 ], |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
83 "label": "Species tree", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
84 "name": "Input dataset", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
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|
85 "outputs": [], |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
86 "position": { |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
87 "left": 201.921875, |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
88 "top": 903.09375 |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
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|
89 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
90 "tool_id": null, |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
91 "tool_state": "{\"name\": \"Species tree\"}", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
92 "tool_version": null, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
93 "type": "data_input", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
94 "uuid": "1f2ca308-faad-44fa-ba48-fff5aeecbbd3", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
95 "workflow_outputs": [ |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
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96 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
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|
97 "label": null, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
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98 "output_name": "output", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
99 "uuid": "50734600-41fa-437a-9b2b-6572fd8763a2" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
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|
100 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
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|
101 ] |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
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|
102 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
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103 "3": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
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104 "annotation": "", |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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105 "content_id": "toolshed.g2.bx.psu.edu/repos/devteam/emboss_5/EMBOSS: transeq101/5.0.0", |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
106 "errors": null, |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
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107 "id": 3, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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diff
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108 "input_connections": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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109 "input1": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
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110 "id": 0, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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111 "output_name": "output" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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|
112 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
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|
113 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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114 "inputs": [ |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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115 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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116 "description": "runtime parameter for tool transeq", |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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117 "name": "input1" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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118 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
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|
119 ], |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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120 "label": null, |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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121 "name": "transeq", |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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122 "outputs": [ |
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123 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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124 "name": "out_file1", |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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125 "type": "fasta" |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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126 } |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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127 ], |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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128 "position": { |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
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diff
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129 "left": 460.0625, |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
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130 "top": 200 |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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131 }, |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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132 "post_job_actions": { |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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133 "HideDatasetActionout_file1": { |
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134 "action_arguments": {}, |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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135 "action_type": "HideDatasetAction", |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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136 "output_name": "out_file1" |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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137 } |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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138 }, |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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139 "tool_id": "toolshed.g2.bx.psu.edu/repos/devteam/emboss_5/EMBOSS: transeq101/5.0.0", |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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140 "tool_shed_repository": { |
2
58c9294400ed
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit d3da4ff3bfb86ce0686a87c4987e94486854d839
earlhaminst
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1
diff
changeset
|
141 "changeset_revision": "1b6538ec8b56", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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142 "name": "emboss_5", |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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143 "owner": "devteam", |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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144 "tool_shed": "toolshed.g2.bx.psu.edu" |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
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145 }, |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
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diff
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|
146 "tool_state": "{\"trim\": \"\\\"no\\\"\", \"__page__\": null, \"input1\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"out_format1\": \"\\\"fasta\\\"\", \"frame\": \"\\\"1\\\"\", \"regions\": \"\\\"\\\"\", \"clean\": \"\\\"no\\\"\", \"table\": \"\\\"0\\\"\", \"alternative\": \"\\\"no\\\"\", \"__rerun_remap_job_id__\": null}", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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147 "tool_version": "5.0.0", |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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148 "type": "tool", |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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149 "uuid": "12722a4e-291d-4ba2-b7f8-77209049b0ac", |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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150 "workflow_outputs": [] |
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151 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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152 "4": { |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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153 "annotation": "", |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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154 "content_id": "toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_makeblastdb/0.1.08", |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
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2
diff
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155 "errors": null, |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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156 "id": 4, |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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157 "input_connections": { |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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158 "input_file": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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159 "id": 3, |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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160 "output_name": "out_file1" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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161 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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162 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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163 "inputs": [ |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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164 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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165 "description": "runtime parameter for tool NCBI BLAST+ makeblastdb", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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166 "name": "mask_data_file" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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167 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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168 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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169 "description": "runtime parameter for tool NCBI BLAST+ makeblastdb", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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170 "name": "input_file" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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171 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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172 ], |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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173 "label": null, |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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174 "name": "NCBI BLAST+ makeblastdb", |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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175 "outputs": [ |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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176 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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177 "name": "outfile", |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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178 "type": "data" |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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179 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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180 ], |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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181 "position": { |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
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2
diff
changeset
|
182 "left": 644.171875, |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
183 "top": 294.890625 |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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184 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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185 "post_job_actions": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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186 "HideDatasetActionoutfile": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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187 "action_arguments": {}, |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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188 "action_type": "HideDatasetAction", |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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189 "output_name": "outfile" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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190 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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|
191 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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|
192 "tool_id": "toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_makeblastdb/0.1.08", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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193 "tool_shed_repository": { |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
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2
diff
changeset
|
194 "changeset_revision": "6f386c5dc4fb", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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195 "name": "ncbi_blast_plus", |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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196 "owner": "devteam", |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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197 "tool_shed": "toolshed.g2.bx.psu.edu" |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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198 }, |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
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199 "tool_state": "{\"__page__\": null, \"mask_data_file\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"input_file\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"dbtype\": \"\\\"prot\\\"\", \"__rerun_remap_job_id__\": null, \"hash_index\": \"\\\"true\\\"\", \"tax\": \"{\\\"__current_case__\\\": 0, \\\"taxselect\\\": \\\"\\\"}\", \"title\": \"\\\"\\\"\", \"parse_seqids\": \"\\\"false\\\"\"}", |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
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200 "tool_version": "0.2.01", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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201 "type": "tool", |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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202 "uuid": "c72477fb-cc1d-45ec-a0cd-8215be8fe8ee", |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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203 "workflow_outputs": [] |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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204 }, |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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205 "5": { |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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206 "annotation": "", |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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207 "content_id": "toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastp_wrapper/0.1.08", |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
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2
diff
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208 "errors": null, |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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209 "id": 5, |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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210 "input_connections": { |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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211 "db_opts|histdb": { |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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212 "id": 4, |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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213 "output_name": "outfile" |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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214 }, |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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215 "query": { |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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216 "id": 3, |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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217 "output_name": "out_file1" |
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218 } |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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219 }, |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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220 "inputs": [ |
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221 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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222 "description": "runtime parameter for tool NCBI BLAST+ blastp", |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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223 "name": "db_opts" |
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224 }, |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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225 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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226 "description": "runtime parameter for tool NCBI BLAST+ blastp", |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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227 "name": "query" |
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228 } |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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229 ], |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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230 "label": null, |
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231 "name": "NCBI BLAST+ blastp", |
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232 "outputs": [ |
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233 { |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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234 "name": "output1", |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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235 "type": "tabular" |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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236 } |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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237 ], |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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238 "position": { |
4
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diff
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239 "left": 929.421875, |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
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diff
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240 "top": 205.0625 |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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241 }, |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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242 "post_job_actions": { |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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243 "HideDatasetActionoutput1": { |
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244 "action_arguments": {}, |
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245 "action_type": "HideDatasetAction", |
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246 "output_name": "output1" |
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247 } |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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248 }, |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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249 "tool_id": "toolshed.g2.bx.psu.edu/repos/devteam/ncbi_blast_plus/ncbi_blastp_wrapper/0.1.08", |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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250 "tool_shed_repository": { |
4
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earlhaminst
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2
diff
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251 "changeset_revision": "6f386c5dc4fb", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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252 "name": "ncbi_blast_plus", |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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253 "owner": "devteam", |
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254 "tool_shed": "toolshed.g2.bx.psu.edu" |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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255 }, |
4
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256 "tool_state": "{\"evalue_cutoff\": \"\\\"1e-10\\\"\", \"__page__\": null, \"adv_opts\": \"{\\\"adv_optional_id_files_opts\\\": {\\\"__current_case__\\\": 0, \\\"adv_optional_id_files_opts_selector\\\": \\\"none\\\"}, \\\"use_sw_tback\\\": \\\"false\\\", \\\"matrix\\\": \\\"BLOSUM62\\\", \\\"max_hsps\\\": \\\"1\\\", \\\"adv_opts_selector\\\": \\\"advanced\\\", \\\"filter_query\\\": \\\"false\\\", \\\"word_size\\\": \\\"0\\\", \\\"__current_case__\\\": 1, \\\"parse_deflines\\\": \\\"false\\\", \\\"qcov_hsp_perc\\\": \\\"0.0\\\", \\\"max_hits\\\": \\\"0\\\"}\", \"__rerun_remap_job_id__\": null, \"db_opts\": \"{\\\"db_opts_selector\\\": \\\"histdb\\\", \\\"subject\\\": \\\"\\\", \\\"histdb\\\": {\\\"__class__\\\": \\\"RuntimeValue\\\"}, \\\"__current_case__\\\": 1, \\\"database\\\": \\\"\\\"}\", \"query\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"blast_type\": \"\\\"blastp\\\"\", \"output\": \"{\\\"out_format\\\": \\\"ext\\\", \\\"__current_case__\\\": 1}\"}", |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
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257 "tool_version": "0.2.01", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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258 "type": "tool", |
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259 "uuid": "7ee928f5-88bf-4d8d-9b0a-072560a9e410", |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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260 "workflow_outputs": [] |
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261 }, |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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262 "6": { |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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263 "annotation": "", |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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264 "content_id": "toolshed.g2.bx.psu.edu/repos/earlhaminst/blast_parser/blast_parser/0.1.1", |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
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265 "errors": null, |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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266 "id": 6, |
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267 "input_connections": { |
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268 "input": { |
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269 "id": 5, |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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270 "output_name": "output1" |
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271 } |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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272 }, |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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273 "inputs": [ |
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274 { |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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275 "description": "runtime parameter for tool BLAST parser", |
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276 "name": "input" |
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277 } |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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278 ], |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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279 "label": null, |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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280 "name": "BLAST parser", |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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281 "outputs": [ |
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282 { |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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283 "name": "output", |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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284 "type": "tabular" |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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285 } |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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286 ], |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
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287 "position": { |
4
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
288 "left": 1134.421875, |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
289 "top": 380.921875 |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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290 }, |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
291 "post_job_actions": {}, |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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diff
changeset
|
292 "tool_id": "toolshed.g2.bx.psu.edu/repos/earlhaminst/blast_parser/blast_parser/0.1.1", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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293 "tool_shed_repository": { |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
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diff
changeset
|
294 "changeset_revision": "363f3480622d", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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diff
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295 "name": "blast_parser", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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diff
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296 "owner": "earlhaminst", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
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297 "tool_shed": "toolshed.g2.bx.psu.edu" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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298 }, |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
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299 "tool_state": "{\"input\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"__rerun_remap_job_id__\": null, \"reciprocal\": \"\\\"true\\\"\", \"__page__\": null}", |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
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diff
changeset
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300 "tool_version": "0.1.2", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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301 "type": "tool", |
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planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
302 "uuid": "3eb98d54-a52d-4605-b068-28a700290d92", |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
303 "workflow_outputs": [ |
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
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304 { |
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
305 "label": null, |
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
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changeset
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306 "output_name": "output", |
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
307 "uuid": "6473f6a6-9036-43f2-ba10-961cecfb351f" |
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
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diff
changeset
|
308 } |
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
309 ] |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
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changeset
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310 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
311 "7": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
312 "annotation": "", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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|
313 "content_id": "toolshed.g2.bx.psu.edu/repos/earlhaminst/hcluster_sg/hcluster_sg/0.5.1", |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
314 "errors": null, |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
315 "id": 7, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
316 "input_connections": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
317 "inputFile": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
318 "id": 6, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
319 "output_name": "output" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
320 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
321 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
322 "inputs": [ |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
323 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
324 "description": "runtime parameter for tool hcluster_sg", |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
325 "name": "c_conditional" |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
326 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
327 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
328 "description": "runtime parameter for tool hcluster_sg", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
329 "name": "inputFile" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
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changeset
|
330 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
331 ], |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
332 "label": null, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
333 "name": "hcluster_sg", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
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334 "outputs": [ |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
335 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
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336 "name": "outputFile", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
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changeset
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337 "type": "tabular" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
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338 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
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339 ], |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
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340 "position": { |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
341 "left": 1317.921875, |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
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342 "top": 207 |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
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343 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
344 "post_job_actions": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
345 "HideDatasetActionoutputFile": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
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346 "action_arguments": {}, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
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changeset
|
347 "action_type": "HideDatasetAction", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
348 "output_name": "outputFile" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
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changeset
|
349 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
350 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
351 "tool_id": "toolshed.g2.bx.psu.edu/repos/earlhaminst/hcluster_sg/hcluster_sg/0.5.1", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
352 "tool_shed_repository": { |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
353 "changeset_revision": "1d2de27d7a9c", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
354 "name": "hcluster_sg", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
355 "owner": "earlhaminst", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
356 "tool_shed": "toolshed.g2.bx.psu.edu" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
357 }, |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
358 "tool_state": "{\"__page__\": null, \"__rerun_remap_job_id__\": null, \"c_conditional\": \"{\\\"c\\\": \\\"\\\", \\\"b\\\": \\\"0.1\\\", \\\"m\\\": \\\"500\\\", \\\"C\\\": {\\\"__class__\\\": \\\"RuntimeValue\\\"}, \\\"O\\\": {\\\"O_selector\\\": \\\"\\\", \\\"__current_case__\\\": 1}, \\\"L\\\": \\\"2\\\", \\\"s\\\": \\\"0.34\\\", \\\"__current_case__\\\": 1}\", \"w\": \"\\\"0\\\"\", \"inputFile\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\"}", |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
359 "tool_version": "0.5.1.1", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
360 "type": "tool", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
361 "uuid": "d2b2ba89-b47d-4241-8adf-0d780f834412", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
362 "workflow_outputs": [] |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
363 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
364 "8": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
365 "annotation": "", |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
366 "content_id": "toolshed.g2.bx.psu.edu/repos/earlhaminst/hcluster_sg_parser/hcluster_sg_parser/0.2.0", |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
367 "errors": null, |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
368 "id": 8, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
369 "input_connections": { |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
370 "inputFile": { |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
371 "id": 7, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
372 "output_name": "outputFile" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
373 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
374 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
375 "inputs": [ |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
376 { |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
377 "description": "runtime parameter for tool hcluster_sg parser", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
378 "name": "inputFile" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
379 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
380 ], |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
381 "label": null, |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
382 "name": "hcluster_sg parser", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
383 "outputs": [ |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
384 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
385 "name": "ids_lists", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
386 "type": "input" |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
387 }, |
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
388 { |
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
389 "name": "discarded", |
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
390 "type": "txt" |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
391 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
392 ], |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
393 "position": { |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
394 "left": 1298, |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
395 "top": 505.09375 |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
396 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
397 "post_job_actions": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
398 "HideDatasetActionids_lists": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
399 "action_arguments": {}, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
400 "action_type": "HideDatasetAction", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
401 "output_name": "ids_lists" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
402 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
403 }, |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
404 "tool_id": "toolshed.g2.bx.psu.edu/repos/earlhaminst/hcluster_sg_parser/hcluster_sg_parser/0.2.0", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
405 "tool_shed_repository": { |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
406 "changeset_revision": "f9e418125021", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
407 "name": "hcluster_sg_parser", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
408 "owner": "earlhaminst", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
409 "tool_shed": "toolshed.g2.bx.psu.edu" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
410 }, |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
411 "tool_state": "{\"__page__\": null, \"max_elems\": \"\\\"200\\\"\", \"min_elems\": \"\\\"3\\\"\", \"__rerun_remap_job_id__\": null, \"inputFile\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\"}", |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
412 "tool_version": "0.2.0", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
413 "type": "tool", |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
414 "uuid": "df3ae47f-f5a3-4f44-9b25-9bc36b049d60", |
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
415 "workflow_outputs": [ |
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
416 { |
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
417 "label": null, |
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
418 "output_name": "discarded", |
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
419 "uuid": "465afc7e-afad-4228-bb28-2f7b1304a771" |
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
420 } |
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
421 ] |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
422 }, |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
423 "9": { |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
424 "annotation": "", |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
425 "content_id": "toolshed.g2.bx.psu.edu/repos/earlhaminst/t_coffee/t_coffee/11.0.8_1", |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
426 "errors": null, |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
427 "id": 9, |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
428 "input_connections": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
429 "input_type|fasta_input": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
430 "id": 3, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
431 "output_name": "out_file1" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
432 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
433 "input_type|identifiers": { |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
434 "id": 8, |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
435 "output_name": "ids_lists" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
436 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
437 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
438 "inputs": [ |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
439 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
440 "description": "runtime parameter for tool T-Coffee", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
441 "name": "input_type" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
442 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
443 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
444 "description": "runtime parameter for tool T-Coffee", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
445 "name": "input_type" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
446 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
447 ], |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
448 "label": null, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
449 "name": "T-Coffee", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
450 "outputs": [ |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
451 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
452 "name": "clustalw_aln", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
453 "type": "clustalw" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
454 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
455 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
456 "name": "dnd", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
457 "type": "nhx" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
458 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
459 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
460 "name": "fasta_aln", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
461 "type": "fasta" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
462 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
463 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
464 "name": "fasta_seq", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
465 "type": "fasta" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
466 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
467 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
468 "name": "msf_aln", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
469 "type": "msf" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
470 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
471 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
472 "name": "phylip", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
473 "type": "phyloxml" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
474 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
475 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
476 "name": "pir_aln", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
477 "type": "pir" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
478 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
479 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
480 "name": "pir_seq", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
481 "type": "pir" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
482 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
483 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
484 "name": "score_ascii", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
485 "type": "ascii" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
486 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
487 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
488 "name": "score_html", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
489 "type": "html" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
490 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
491 ], |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
492 "position": { |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
493 "left": 713.921875, |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
494 "top": 521.5625 |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
495 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
496 "post_job_actions": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
497 "HideDatasetActionclustalw_aln": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
498 "action_arguments": {}, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
499 "action_type": "HideDatasetAction", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
500 "output_name": "clustalw_aln" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
501 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
502 "HideDatasetActiondnd": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
503 "action_arguments": {}, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
504 "action_type": "HideDatasetAction", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
505 "output_name": "dnd" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
506 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
507 "HideDatasetActionfasta_aln": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
508 "action_arguments": {}, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
509 "action_type": "HideDatasetAction", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
510 "output_name": "fasta_aln" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
511 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
512 "HideDatasetActionfasta_seq": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
513 "action_arguments": {}, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
514 "action_type": "HideDatasetAction", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
515 "output_name": "fasta_seq" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
516 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
517 "HideDatasetActionmsf_aln": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
518 "action_arguments": {}, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
519 "action_type": "HideDatasetAction", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
520 "output_name": "msf_aln" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
521 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
522 "HideDatasetActionphylip": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
523 "action_arguments": {}, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
524 "action_type": "HideDatasetAction", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
525 "output_name": "phylip" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
526 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
527 "HideDatasetActionpir_aln": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
528 "action_arguments": {}, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
529 "action_type": "HideDatasetAction", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
530 "output_name": "pir_aln" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
531 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
532 "HideDatasetActionpir_seq": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
533 "action_arguments": {}, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
534 "action_type": "HideDatasetAction", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
535 "output_name": "pir_seq" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
536 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
537 "HideDatasetActionscore_ascii": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
538 "action_arguments": {}, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
539 "action_type": "HideDatasetAction", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
540 "output_name": "score_ascii" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
541 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
542 "HideDatasetActionscore_html": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
543 "action_arguments": {}, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
544 "action_type": "HideDatasetAction", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
545 "output_name": "score_html" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
546 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
547 }, |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
548 "tool_id": "toolshed.g2.bx.psu.edu/repos/earlhaminst/t_coffee/t_coffee/11.0.8_1", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
549 "tool_shed_repository": { |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
550 "changeset_revision": "a91be6005274", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
551 "name": "t_coffee", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
552 "owner": "earlhaminst", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
553 "tool_shed": "toolshed.g2.bx.psu.edu" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
554 }, |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
555 "tool_state": "{\"__page__\": null, \"input_type\": \"{\\\"identifiers\\\": {\\\"__class__\\\": \\\"RuntimeValue\\\"}, \\\"filter_fasta\\\": \\\"yes\\\", \\\"fasta_input\\\": {\\\"__class__\\\": \\\"RuntimeValue\\\"}, \\\"__current_case__\\\": 0}\", \"__rerun_remap_job_id__\": null, \"outputs\": \"[\\\"fasta_aln\\\"]\", \"method03\": \"null\", \"method02\": \"[\\\"clustalw_msa\\\"]\", \"method01\": \"null\"}", |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
556 "tool_version": "11.0.8_1", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
557 "type": "tool", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
558 "uuid": "827ba178-5028-4ae4-b5e1-f234bcfce9f8", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
559 "workflow_outputs": [] |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
560 }, |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
561 "10": { |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
562 "annotation": "", |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
563 "content_id": "trimmer", |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
564 "errors": null, |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
565 "id": 10, |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
566 "input_connections": { |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
567 "input1": { |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
568 "id": 8, |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
569 "output_name": "ids_lists" |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
570 } |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
571 }, |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
572 "inputs": [ |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
573 { |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
574 "description": "runtime parameter for tool Trim", |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
575 "name": "input1" |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
576 } |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
577 ], |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
578 "label": null, |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
579 "name": "Trim", |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
580 "outputs": [ |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
581 { |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
582 "name": "out_file1", |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
583 "type": "input" |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
584 } |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
585 ], |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
586 "position": { |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
587 "left": 449.671875, |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
588 "top": 777.09375 |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
589 }, |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
590 "post_job_actions": { |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
591 "HideDatasetActionout_file1": { |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
592 "action_arguments": {}, |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
593 "action_type": "HideDatasetAction", |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
594 "output_name": "out_file1" |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
595 } |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
596 }, |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
597 "tool_id": "trimmer", |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
598 "tool_state": "{\"__page__\": null, \"input1\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"end\": \"\\\"-2\\\"\", \"fastq\": \"\\\"\\\"\", \"ignore\": \"null\", \"start\": \"\\\"1\\\"\", \"__rerun_remap_job_id__\": null, \"col\": \"\\\"0\\\"\"}", |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
599 "tool_version": "0.0.1", |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
600 "type": "tool", |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
601 "uuid": "72a2109e-e01f-466e-a962-5c7ff5d0c2e3", |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
602 "workflow_outputs": [] |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
603 }, |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
604 "11": { |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
605 "annotation": "", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
606 "content_id": "toolshed.g2.bx.psu.edu/repos/galaxyp/filter_by_fasta_ids/filter_by_fasta_ids/1.0", |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
607 "errors": null, |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
608 "id": 11, |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
609 "input_connections": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
610 "identifiers": { |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
611 "id": 10, |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
612 "output_name": "out_file1" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
613 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
614 "input": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
615 "id": 0, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
616 "output_name": "output" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
617 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
618 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
619 "inputs": [ |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
620 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
621 "description": "runtime parameter for tool Filter by FASTA IDs", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
622 "name": "input" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
623 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
624 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
625 "description": "runtime parameter for tool Filter by FASTA IDs", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
626 "name": "identifiers" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
627 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
628 ], |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
629 "label": null, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
630 "name": "Filter by FASTA IDs", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
631 "outputs": [ |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
632 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
633 "name": "output", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
634 "type": "fasta" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
635 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
636 ], |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
637 "position": { |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
638 "left": 575.8125, |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
639 "top": 980 |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
640 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
641 "post_job_actions": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
642 "HideDatasetActionoutput": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
643 "action_arguments": {}, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
644 "action_type": "HideDatasetAction", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
645 "output_name": "output" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
646 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
647 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
648 "tool_id": "toolshed.g2.bx.psu.edu/repos/galaxyp/filter_by_fasta_ids/filter_by_fasta_ids/1.0", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
649 "tool_shed_repository": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
650 "changeset_revision": "8d15aebf55fd", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
651 "name": "filter_by_fasta_ids", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
652 "owner": "galaxyp", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
653 "tool_shed": "toolshed.g2.bx.psu.edu" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
654 }, |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
655 "tool_state": "{\"input\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"__rerun_remap_job_id__\": null, \"identifiers\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"dedup\": \"\\\"true\\\"\", \"__page__\": null}", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
656 "tool_version": "1.0", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
657 "type": "tool", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
658 "uuid": "b22832ea-47b0-46a1-87da-e362672133b1", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
659 "workflow_outputs": [] |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
660 }, |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
661 "12": { |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
662 "annotation": "", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
663 "content_id": "toolshed.g2.bx.psu.edu/repos/devteam/emboss_5/EMBOSS: tranalign100/5.0.0", |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
664 "errors": null, |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
665 "id": 12, |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
666 "input_connections": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
667 "input1": { |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
668 "id": 11, |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
669 "output_name": "output" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
670 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
671 "input2": { |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
672 "id": 9, |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
673 "output_name": "fasta_aln" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
674 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
675 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
676 "inputs": [ |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
677 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
678 "description": "runtime parameter for tool tranalign", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
679 "name": "input2" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
680 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
681 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
682 "description": "runtime parameter for tool tranalign", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
683 "name": "input1" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
684 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
685 ], |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
686 "label": null, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
687 "name": "tranalign", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
688 "outputs": [ |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
689 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
690 "name": "out_file1", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
691 "type": "fasta" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
692 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
693 ], |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
694 "position": { |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
695 "left": 952.84375, |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
696 "top": 879 |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
697 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
698 "post_job_actions": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
699 "HideDatasetActionout_file1": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
700 "action_arguments": {}, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
701 "action_type": "HideDatasetAction", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
702 "output_name": "out_file1" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
703 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
704 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
705 "tool_id": "toolshed.g2.bx.psu.edu/repos/devteam/emboss_5/EMBOSS: tranalign100/5.0.0", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
706 "tool_shed_repository": { |
2
58c9294400ed
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit d3da4ff3bfb86ce0686a87c4987e94486854d839
earlhaminst
parents:
1
diff
changeset
|
707 "changeset_revision": "1b6538ec8b56", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
708 "name": "emboss_5", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
709 "owner": "devteam", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
710 "tool_shed": "toolshed.g2.bx.psu.edu" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
711 }, |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
712 "tool_state": "{\"input2\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"__page__\": null, \"input1\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"out_format1\": \"\\\"fasta\\\"\", \"__rerun_remap_job_id__\": null, \"table\": \"\\\"0\\\"\"}", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
713 "tool_version": "5.0.0", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
714 "type": "tool", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
715 "uuid": "e33d053e-1edf-44b7-a08a-abe8e5bcfbc6", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
716 "workflow_outputs": [] |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
717 }, |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
718 "13": { |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
719 "annotation": "", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
720 "content_id": "toolshed.g2.bx.psu.edu/repos/earlhaminst/treebest_best/treebest_best/1.9.2", |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
721 "errors": null, |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
722 "id": 13, |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
723 "input_connections": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
724 "aln": { |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
725 "id": 12, |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
726 "output_name": "out_file1" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
727 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
728 "species_tree": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
729 "id": 2, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
730 "output_name": "output" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
731 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
732 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
733 "inputs": [ |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
734 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
735 "description": "runtime parameter for tool TreeBeST best", |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
736 "name": "aln" |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
737 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
738 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
739 "description": "runtime parameter for tool TreeBeST best", |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
740 "name": "C" |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
741 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
742 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
743 "description": "runtime parameter for tool TreeBeST best", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
744 "name": "species_tree" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
745 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
746 ], |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
747 "label": null, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
748 "name": "TreeBeST best", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
749 "outputs": [ |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
750 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
751 "name": "output", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
752 "type": "nhx" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
753 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
754 ], |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
755 "position": { |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
756 "left": 1173.921875, |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
757 "top": 967.5 |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
758 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
759 "post_job_actions": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
760 "HideDatasetActionoutput": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
761 "action_arguments": {}, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
762 "action_type": "HideDatasetAction", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
763 "output_name": "output" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
764 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
765 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
766 "tool_id": "toolshed.g2.bx.psu.edu/repos/earlhaminst/treebest_best/treebest_best/1.9.2", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
767 "tool_shed_repository": { |
2
58c9294400ed
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit d3da4ff3bfb86ce0686a87c4987e94486854d839
earlhaminst
parents:
1
diff
changeset
|
768 "changeset_revision": "66170848da6c", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
769 "name": "treebest_best", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
770 "owner": "earlhaminst", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
771 "tool_shed": "toolshed.g2.bx.psu.edu" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
772 }, |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
773 "tool_state": "{\"A\": \"\\\"false\\\"\", \"aln\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"C\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"b\": \"\\\"0.01\\\"\", \"d\": \"\\\"0.15\\\"\", \"g\": \"\\\"false\\\"\", \"F\": \"\\\"11\\\"\", \"S\": \"\\\"false\\\"\", \"__page__\": null, \"k\": \"{\\\"__current_case__\\\": 0, \\\"k_selector\\\": \\\"yes\\\"}\", \"c\": \"\\\"2\\\"\", \"L\": \"\\\"0.2\\\"\", \"P\": \"\\\"false\\\"\", \"s\": \"\\\"false\\\"\", \"r\": \"\\\"false\\\"\", \"a\": \"{\\\"a_selector\\\": \\\"yes\\\", \\\"__current_case__\\\": 0}\", \"species_tree\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"N\": \"\\\"false\\\"\", \"__rerun_remap_job_id__\": null, \"l\": \"\\\"0.1\\\"\"}", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
774 "tool_version": "1.9.2", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
775 "type": "tool", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
776 "uuid": "3e42f4c3-7258-465b-bb24-7ea9e2d3ec40", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
777 "workflow_outputs": [] |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
778 }, |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
779 "14": { |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
780 "annotation": "", |
2
58c9294400ed
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit d3da4ff3bfb86ce0686a87c4987e94486854d839
earlhaminst
parents:
1
diff
changeset
|
781 "content_id": "toolshed.g2.bx.psu.edu/repos/earlhaminst/gafa/gafa/0.3.0", |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
782 "errors": null, |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
783 "id": 14, |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
784 "input_connections": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
785 "alignmentFile": { |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
786 "id": 9, |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
787 "output_name": "fasta_aln" |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
788 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
789 "genesFile": { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
790 "id": 1, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
791 "output_name": "output" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
792 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
793 "treeFile": { |
1
267a94f068d7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 424b04f764977420ce4d92ebee5929fa18a30efb-dirty
earlhaminst
parents:
0
diff
changeset
|
794 "id": 13, |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
795 "output_name": "output" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
796 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
797 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
798 "inputs": [ |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
799 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
800 "description": "runtime parameter for tool Gene Align and Family Aggregator", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
801 "name": "treeFile" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
802 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
803 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
804 "description": "runtime parameter for tool Gene Align and Family Aggregator", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
805 "name": "alignmentFile" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
806 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
807 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
808 "description": "runtime parameter for tool Gene Align and Family Aggregator", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
809 "name": "genesFile" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
810 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
811 ], |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
812 "label": null, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
813 "name": "Gene Align and Family Aggregator", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
814 "outputs": [ |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
815 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
816 "name": "outputFile", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
817 "type": "gafa.sqlite" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
818 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
819 ], |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
820 "position": { |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
821 "left": 1299.921875, |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
822 "top": 747.5 |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
823 }, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
824 "post_job_actions": {}, |
2
58c9294400ed
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit d3da4ff3bfb86ce0686a87c4987e94486854d839
earlhaminst
parents:
1
diff
changeset
|
825 "tool_id": "toolshed.g2.bx.psu.edu/repos/earlhaminst/gafa/gafa/0.3.0", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
826 "tool_shed_repository": { |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
827 "changeset_revision": "c388666f58e0", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
828 "name": "gafa", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
829 "owner": "earlhaminst", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
830 "tool_shed": "toolshed.g2.bx.psu.edu" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
831 }, |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
832 "tool_state": "{\"__page__\": null, \"treeFile\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"__rerun_remap_job_id__\": null, \"alignmentFile\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\", \"genesFile\": \"{\\\"__class__\\\": \\\"RuntimeValue\\\"}\"}", |
2
58c9294400ed
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit d3da4ff3bfb86ce0686a87c4987e94486854d839
earlhaminst
parents:
1
diff
changeset
|
833 "tool_version": "0.3.0", |
0
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
834 "type": "tool", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
835 "uuid": "049fb5e1-4f3b-4cf5-80a6-2fa609674fc5", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
836 "workflow_outputs": [ |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
837 { |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
838 "label": null, |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
839 "output_name": "outputFile", |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
840 "uuid": "a3dbb7a3-356a-4019-a10d-08896e990c8e" |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
841 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
842 ] |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
843 } |
b92f5ab6d127
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit 9c148d5ba49d9de5f7b1c1f4b32cd8b5e56cb975-dirty
earlhaminst
parents:
diff
changeset
|
844 }, |
4
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
845 "tags": [], |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
846 "uuid": "bbf45200-b853-41bf-a853-abb1dec8ca9d" |
cc5419f7dff7
planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/workflows/GeneSeqToFamily commit efb6a192c36d4e8aa6d24d692890025ffd8a0e65-dirty
earlhaminst
parents:
2
diff
changeset
|
847 } |