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diff test-data/Mus_pahari.PAHARI_EIJ_v1.1.cds.all.shortened.fa @ 10:e8e75a79de59 draft

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"planemo upload for repository https://github.com/TGAC/earlham-galaxytools/tree/master/tools/gstf_preparation commit 9c8611fee927883f50bc6955771aa69df1ce8457"
author earlhaminst
date Thu, 31 Oct 2019 08:16:51 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/Mus_pahari.PAHARI_EIJ_v1.1.cds.all.shortened.fa	Thu Oct 31 08:16:51 2019 -0400
@@ -0,0 +1,99 @@
+>MGP_PahariEiJ_T0009933.1 cds chromosome:PAHARI_EIJ_v1.1:13:62596741:62626623:1 gene:MGP_PahariEiJ_G0008413.1 gene_biotype:polymorphic_pseudogene transcript_biotype:protein_coding gene_symbol:Atp10d description:ATPase, class V, type 10D [Source:MGI Symbol;Acc:MGI:2450125]
+AAGACAAATGGCTGGCTTGGAAGCGTAACTCTCACCGCCCTTTGGATCCCTGCTCGCTTC
+TCTTTTGGCACTTTGGGATCCGAGGTAACCATGCGGTGATGAGCGGCCCGGGAGGGACAG
+ATCACCTGAACCAGCCGGGTCTCCCTGCGTCTTGGACATGACTGAGCTTCTGCAGTGGGC
+CAGACATCACTGGCGTCGGCTGAGCCATGGGAGAACCCAGGGTGAAGATGAGAGGCCGTA
+CAACTACGCCTCCCTGCTGGCCTGTGGGGGCAAGTCCCCCCGGACCCCCAGGCCTGCAGG
+AAAGCACCGTGTCGTTATTCCTCACCTTCAGTGCTTCAGGGATGAGTACGAGAGGTTTTC
+TGGAACCTACGTGAATAACCGGATACGGACGACCAAGTACACACTCCTGAACTTTGTGCC
+AAGGAACTTATTTGAACAGTTTCACAGGGCTGCCAATTTATATTTCCTGTTCCTCGTGGT
+CCTGAACTGGGTGCCTTTGGTAGAAGCCTTCCAAAAGGAAATCACCATGCTGCCTCTGGT
+GGTGGTCCTCACAATTATTGCAATTAAAGATGGCTTGGAAGACTACCGGAAGTACAAAAT
+TGACAAGCAGATCAACAACTTAATAACCAAGGTTTACAGTAGG
+>MGP_PahariEiJ_T0009934.1 cds chromosome:PAHARI_EIJ_v1.1:13:62596741:62686932:1 gene:MGP_PahariEiJ_G0008413.1 gene_biotype:polymorphic_pseudogene transcript_biotype:polymorphic_pseudogene gene_symbol:Atp10d description:ATPase, class V, type 10D [Source:MGI Symbol;Acc:MGI:2450125]
+AAGACAAATGGCTGGCTTGGAAGCGTAACTCTCACCGCCCTTTGGATCCCTGCTCGCTTC
+TCTTTTGGCACTTTGGGATCCGAGGTAACCATGCGGTGATGAGCGGCCCGGGAGGGACAG
+ATCACCTGAACCAGCCGGGTCTCCCTGCGTCTTGGACATGACTGAGCTTCTGCAGTGGGC
+CAGACATCACTGGCGTCGGCTGAGCCATGGGAGAACCCAGGGTGAAGATGAGAGGCCGTA
+CAACTACGCCTCCCTGCTGGCCTGTGGGGGCAAGTCCCCCCGGACCCCCAGGCCTGCAGG
+AAAGCACCGTGTCGTTATTCCTCACCTTCAGTGCTTCAGGGATGAGTACGAGAGGTTTTC
+TGGAACCTACGTGAATAACCGGATACGGACGACCAAGTACACACTCCTGAACTTTGTGCC
+AAGGAACTTATTTGAACAGTTTCACAGGGCTGCCAATTTATATTTCCTGTTCCTCGTGGT
+CCTGAACTGGGTGCCTTTGGTAGAAGCCTTCCAAAAGGAAATCACCATGCTGCCTCTGGT
+GGTGGTCCTCACAATTATTGCAATTAAAGATGGCTTGGAAGACTACCGGAAGTACAAAAT
+TGACAAGCAGATCAACAACTTAATAACCAAGGTTTACAGTAGGACTCTGAAGTTGATCCT
+GAGAAGTTCTCCAGTAGGATAGAATGTGAAAGCCCAAACAATGACCTCAGCAGATTCCGA
+GGTTTCCTGGAACATGCCAATAAAGACCGTGTGGGCCTCAGCAAAGAGAATTTATTGCTC
+CGCGGGTGCACCATCAGAAACACAGAGGCTGTGGTGGGCATTGTGGTCTATGCAGGTCAT
+GAAACCAAAGCAATGCTGAACAACAGTGGGCCACGGTATAAGCGCAGTAAGTTAGAGAGA
+AGAGCAAATACAGACGTCCTCTGGTGTGTCCTGCTTCTGATCGTCATGTGCTTAACTGGT
+GCACTGGGTCACGGCATATGGCTGAGCAGGTATGAGAACATGCTCTTTTTTAACATCCCT
+GAGCCGGACGGACGTGTCCTATCACCTGTGCTGACTGGGTTCTATGTGTTCTGGACCATG
+ATCATCTTGCTGCAGGTCCTGATCCCCATTTCTCTCTACGTGTCCATTGAGATCGTGAAG
+CTGGGACAGATCTATTTCATCCAGAGCGATGTAGATTTCTACAACGAGAAAATGGATTCG
+ACCATTCAGTGCCGAGCCCTAAACATCACTGAGGACCTTGGGCAGATTCAATACCTCTTT
+TCTGATAAGACAGGAACCCTCACAGAGAATAAGATGGTGTTTCGGAGGTGCAGTGTAGCA
+GGGTTTGACTACTGCCATGAAGAAAACGCCAGGAGGCTCGAGTCCTATCAGGAAGCTGTC
+TCTGAAGAGGAGGAACGCGCAGACACTCTCGGCGGCTCCCTCAGCAACGTGGCGAGACCC
+AGAGCCCAGGGCTGCAGGACAGTTCACAGTGGGCTTCCGGGAAAACCCCCGGCTCACCTC
+TCCGGGAGCACCTCTGCTGTAGGAGACGCAGAAGGATCCGGGGAAGTGCCTCATTCCAGA
+CAGGCTGCCTTCAGTAGTCCCATGGAAACAGACGTGGTACCAGATACCAGACTTTTAGAC
+AAATTTAGCCAGATTACCCCTCAGCTGCTCACTGGACTGGATGGGACCTTGCAGAGCTCA
+TCACTGGAGACCTTGTACATCATGGACTTCTTTATTGCACTGGCAATTTGCAACACGGTG
+GTGGTTTCTGCCCCAAACCAACCTCGGCAAAAGATTGGGCTCTCCTCACTGGGTGGAATG
+CCCATCAAGTCCTTGGACGAGATTAAAAACATCTTCCAGAAATTGTCTGTCCGGAGATCA
+AGTTCACCATCCCTTGCCAGCGGGAAGGATTCATCCTCTGGGACTCCCTGTGCCTTTGTG
+AGCAGAATCTCTTTCTTTAGTCGACCAAAACTGTCACCTCCTATGGAGGACGAGTCTTCC
+CAAATGGATGAAATCCCCCAGGCCAGTAACTCAGCTTGCTGTACAGAAACGGAGGCACAA
+AACAGTGCCTTAGGACTCAGCGTCGGCTCCGCGGAAGCCCTAAATGGACCACCGCCCTTG
+GCTTCCAACCTGTGTTATGAGGCGGAGAGTCCAGATGAAGCAGCCTTGGTGTATGCCGCC
+AGAGCTTATCATTGCACTTTACAGTCTCGGACCCCAGAGCAGGTCATGGTGGAGTTTGCA
+GCTTTGGGCTCATTAACATTTCAACTCCTACACATCCTGCCCTTTGACTCAGTAAGGAAA
+AGAATGTCGGTGGTGGTCCGGCACCCTCTTTCCAAACAAGTCGTGGTGTATACAAAAGGC
+GCTGATTCCGTGATCATGGAGCTGCTGTCTATGGCTTCCTCGGATGGAACAAATCTGGAA
+GAACAACAGATGATAATAAGGGAGAGAACGCAGAGGCACCTGGACGAGTATGCCAGACGA
+GGGCTGCGCACTCTGTGTGTTGCAAAGAAGGTCATGAGTGACACGGAATATGCAGAGTGG
+CTGAGGAATCACTTCCTAGCTGAAACCAGCATTGACAACAGGGAGGAGCTGCTAGTTGAG
+TCTGCCATGAGACTAGAAAACAAACTCACGTTACTTGGTGCTACTGGCATTGAAGATCGT
+CTGCAGGAGGGGGTCCCTGAGTCTATAGAAGCCCTTCACCAAGCTGGCATCAAGATCTGG
+ATGCTGACAGGGGACAAGCAGGAGACAGCTGTCAACATAGCTTATGCATGCAGACTCCTG
+GAACCAGATGACAAGCTCTTCATCCTCAATACACAAAGTGAGGATGCCTGTGGGATGCTG
+ATGAGTGCAATTTTGGAAGAACTTCAGAAGAGAGCTCAGGTGTCTCCGGAGCTGGCATCA
+CCAAGAAAGAACTTTCCTCAGCCCCCTGACCCTCAGGGCCAGGGACGTGCGGGACTTGTT
+ATCACTGGGAAGAGCCTGGAGTTTGCCCTGCAGGAGAGTCTACAAAGACAGTTCCTTGAG
+CTGACTGCATGGTGCCAAGCTGTGATCTGCTGCCGAGCCACCCCCCTTCAAAAGAGTGAG
+GTGGTGAAATTGGTTCGAAACCATCTCCATGTGATGACCCTAGCCATTGGTGACGGTGCC
+AATGATGTTAGCATGATACAAGTGGCTGACATTGGGATCGGTGTCTCAGGTCAAGAAGGC
+ATGCAGGCTGTGATGGCCAGTGACTTCGCCATCTCTCAGTTCAGACATCTCAGCAAGCTT
+CTCCTCGTGCACGGGCACTGGTGTTACACCCGGCTCTCCAACATGATTCTCTATTTTTTC
+TACAAGAATGTGGCCTATGTGAATCTCCTTTTCTGGTACCAGTTCTTTTGTGGGTTTTCA
+GGAACATCGATGACTGACTACTGGGTGCTGATCTTCTTCAACCTCCTCTTCACATCTGTC
+CCCCCCATCATTTATGGCGTTTTGGAGAAAGATGTGTCAGCAGAGACCCTCCTGCAGCTG
+CCTGAACTTTACCGGAGTGGTCAGCGATCAGAGGAATACTTGCCCGTCACTTTCTGGATC
+ACCTTGTTGGATGCCTTTTATCAAAGCCTGGTCTGCTTCTTTGTGCCTTACTTTACCTAC
+CAGGGCTCTGACATTGACATCTTTACCTTTGGGAATCCCCTGAACACGGCGGCTCTGTTC
+ATCATTCTCCTCCACCTGGTGATCGAAAGCAAGAGTTTGACTTGGATCCACATGCTGGTC
+ATTGTTGGGAGCATCTTGTCCTACTTTTTCTTTGCCTTGGCTTTTGGAGCCTTATGTGTC
+ACTTGCAACCCACCCTCCAACCCCTACGGGATCATGCAGAAGCACATGCTAGACCCTGTG
+TTCTACTTAGTTTGTGTTCTTACAACCTTCGTAGCACTCCTGCCCAGGTTTGCCTACCGA
+GTTCTTCAGGGATCCATGTTTCCATCTCCAGTTCTCAGAGCCAAGTACTTTGACCGACTA
+CCTCCAGAGGAGAGAGCTGAAGCTCTCAAGAGGTGGAGAGGGACTGCAAAGATCAATCAC
+GTGGCATCTCAGCATGCCAGCCAATCAGCTGCTAAGTCAGGAAGACCCACGCCTGGGTCT
+TCTGCTGTCCTTGCAATGAAGACAGCAACAGTGCGTACTGTTGAGCAGAGCACATGTGAA
+ACTGCGCTAGACCATGGCTGCTCTGAACCTGGGGCCTCCAGGACGACTGGACCCTCAGCA
+AGT
+>MGP_PahariEiJ_T0009938.1 cds chromosome:PAHARI_EIJ_v1.1:13:62671962:62686918:1 gene:MGP_PahariEiJ_G0008413.1 gene_biotype:polymorphic_pseudogene transcript_biotype:protein_coding gene_symbol:Atp10d description:ATPase, class V, type 10D [Source:MGI Symbol;Acc:MGI:2450125]
+ATGACTGACTACTGGGTGCTGATCTTCTTCAACCTCCTCTTCACATCTGTCCCCCCCATC
+ATTTATGGCGTTTTGGAGAAAGATGTGTCAGCAGAGACCCTCCTGCAGCTGCCTGAACTT
+TACCGGAGTGGTCAGCGATCAGAGGAATACTTGCCCGTCACTTTCTGGATCACCTTGTTG
+GATGCCTTTTATCAAAGCCTGGTCTGCTTCTTTGTGCCTTACTTTACCTACCAGGGCTCT
+GACATTGACATCTTTACCTTTGGGAATCCCCTGAACACGGCGGCTCTGTTCATCATTCTC
+CTCCACCTGGTGATCGAAAGCAAGAGTTTGACTTGGATCCACATGCTGGTCATTGTTGGG
+AGCATCTTGTCCTACTTTTTCTTTGCCTTGGCTTTTGGAGCCTTATGTGTCACTTGCAAC
+CCACCCTCCAACCCCTACGGGATCATGCAGAAGCACATGCTAGACCCTGTGTTCTACTTA
+GTTTGTGTTCTTACAACCTTCGTAGCACTCCTGCCCAGGTTTGCCTACCGAGTTCTTCAG
+GGATCCATGTTTCCATCTCCAGTTCTCAGAGCCAAGTACTTTGACCGACTACCTCCAGAG
+GAGAGAGCTGAAGCTCTCAAGAGGTGGAGAGGGACTGCAAAGATCAATCACGTGGCATCT
+CAGCATGCCAGCCAATCAGCTGCTAAGTCAGGAAGACCCACGCCTGGGTCTTCTGCTGTC
+CTTGCAATGAAGACAGCAACAGTGCGTACTGTTGAGCAGAGCACATGTGAAACTGCGCTA
+GACCATGGCTGCTCTGAACCTGGGGCCTCCAGGACGACTGGACCCTCAGCAAGT