Mercurial > repos > ebi-gxa > scanpy_run_fdg

comparison scanpy-run-fdg.xml @ 4:5fb11df8f217 draft

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planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit 400799f99ee36ad12b990b1ccabf4be16a26c003
author ebi-gxa
date Mon, 25 Nov 2019 14:38:32 -0500
parents 96af0059b974
children 6f84e4382fb2
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3:d929261bc28c 4:5fb11df8f217
1 <?xml version="1.0" encoding="utf-8"?> 1 <?xml version="1.0" encoding="utf-8"?>
2 <tool id="scanpy_run_fdg" name="Scanpy RunFDG" version="@TOOL_VERSION@+galaxy0"> 2 <tool id="scanpy_run_fdg" name="Scanpy RunFDG" version="@TOOL_VERSION@+galaxy6">
3 <description>visualise cell clusters using force-directed graph</description> 3 <description>visualise cell clusters using force-directed graph</description>
4 <macros> 4 <macros>
5 <import>scanpy_macros2.xml</import> 5 <import>scanpy_macros2.xml</import>
6 </macros> 6 </macros>
7 <expand macro="requirements"/> 7 <expand macro="requirements"/>
50 </when> 50 </when>
51 </conditional> 51 </conditional>
52 </inputs> 52 </inputs>
53 53
54 <outputs> 54 <outputs>
55 <data name="output_h5" format="h5" from_work_dir="output.h5" label="${tool.name} on ${on_string}: FDG object"/> 55 <expand macro="output_data_obj" description="FDG object"/>
56 <data name="output_embed" format="csv" from_work_dir="embeddings.csv" label="${tool.name} on ${on_string}: FDG embeddings"> 56 <data name="output_embed" format="csv" from_work_dir="embeddings.csv" label="${tool.name} on ${on_string}: FDG embeddings">
57 <filter>embeddings</filter> 57 <filter>embeddings</filter>
58 </data> 58 </data>
59 </outputs> 59 </outputs>
60 60