Mercurial > repos > ebi-gxa > seurat_find_variable_genes

comparison seurat_find_variable_genes.xml @ 4:051953328516 draft

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"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit a1ad1ddd9b8e4db5bb82c3accae8311e0e488b19"
author ebi-gxa
date Fri, 27 Nov 2020 13:48:35 +0000
parents 8f67188f11c4
children 5be60722113a
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3:5a79dc04aafe 4:051953328516
56 <data name="output_tab" format="tabular" from_work_dir="*.tab" label="${tool.name} on ${on_string}: Variable genes tabular file"/> 56 <data name="output_tab" format="tabular" from_work_dir="*.tab" label="${tool.name} on ${on_string}: Variable genes tabular file"/>
57 </outputs> 57 </outputs>
58 58
59 <tests> 59 <tests>
60 <test> 60 <test>
61 <param name="input" ftype="rdata" value="out_norm.rds"/> 61 <param name="rds_seurat_file" ftype="rdata" value="normalised_seurat.rds"/>
62 <output name="rds_seurat_file" ftype="rdata" value="out_findvar.rds" compare="sim_size"/> 62 <output name="rds_seurat_file" ftype="rdata" value="variable_genes_seurat.rds" compare="sim_size" delta="1000000" />
63 <output name="output_tab" value="filtered_genes.txt" compare="sim_size" delta="1000000" />
63 </test> 64 </test>
64 </tests> 65 </tests>
65 <help><![CDATA[ 66 <help><![CDATA[
66 .. class:: infomark 67 .. class:: infomark
67 68