Mercurial > repos > ebi-gxa > seurat_find_variable_genes

diff seurat_find_variable_genes.xml @ 4:051953328516 draft

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"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit a1ad1ddd9b8e4db5bb82c3accae8311e0e488b19"
author ebi-gxa
date Fri, 27 Nov 2020 13:48:35 +0000
parents 8f67188f11c4
children 5be60722113a
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--- a/seurat_find_variable_genes.xml	Sat Jul 11 08:41:50 2020 -0400
+++ b/seurat_find_variable_genes.xml	Fri Nov 27 13:48:35 2020 +0000
@@ -58,8 +58,9 @@
 
     <tests>
         <test>
-            <param name="input" ftype="rdata" value="out_norm.rds"/>
-            <output name="rds_seurat_file" ftype="rdata" value="out_findvar.rds" compare="sim_size"/>
+            <param name="rds_seurat_file" ftype="rdata" value="normalised_seurat.rds"/>
+            <output name="rds_seurat_file" ftype="rdata" value="variable_genes_seurat.rds" compare="sim_size" delta="1000000" />
+            <output name="output_tab" value="filtered_genes.txt" compare="sim_size" delta="1000000" />
         </test>
     </tests>
     <help><![CDATA[