Mercurial > repos > ebi-gxa > seurat_find_variable_genes

changeset 2:8f67188f11c4 draft

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planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit bbe3c1f7fd8489951f2d90415fe80dd5cf961ca0
author ebi-gxa
date Fri, 10 Jul 2020 21:39:11 -0400
parents a6077346f869
children 5a79dc04aafe
files seurat_find_variable_genes.xml seurat_macros.xml
diffstat 2 files changed, 5 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/seurat_find_variable_genes.xml	Mon Nov 25 06:10:14 2019 -0500
+++ b/seurat_find_variable_genes.xml	Fri Jul 10 21:39:11 2020 -0400
@@ -1,4 +1,4 @@
-<tool id="seurat_find_variable_genes" name="Seurat FindVariableGenes" version="@SEURAT_VERSION@_@VERSION@+galaxy0">
+<tool id="seurat_find_variable_genes" name="Seurat FindVariableGenes" version="@SEURAT_VERSION@+galaxy0">
     <description>identify variable genes</description>
     <macros>
         <import>seurat_macros.xml</import>
--- a/seurat_macros.xml	Mon Nov 25 06:10:14 2019 -0500
+++ b/seurat_macros.xml	Fri Jul 10 21:39:11 2020 -0400
@@ -1,6 +1,6 @@
 <?xml version="1.0"?>
 <macros>
-    <token name="@VERSION@">0.0.6</token>
+    <token name="@VERSION@">0.0.7</token>
     <token name="@SEURAT_VERSION@">3.1.1</token>
     <xml name="requirements">
         <requirements>
@@ -97,6 +97,8 @@
     <token name="@VERSION_HISTORY@"><![CDATA[
 **Version history**
 
+3.1.1_0.0.7: Exposes perplexity and enables tab input.
+
 3.1.1_0.0.6+galaxy0: Moved to Seurat 3.
 
   Find clusters: removed dims-use, k-param, prune-snn.
@@ -121,6 +123,7 @@
               url = {https://github.com/ebi-gene-expression-group/r-seurat-scripts.git},
             }
             </citation>
+            <citation type="doi">10.1101/2020.04.08.032698</citation>
         </citations>
     </xml>
 </macros>