Mercurial > repos > ebi-gxa > seurat_run_tsne

changeset 4:2d294978b152 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit a1ad1ddd9b8e4db5bb82c3accae8311e0e488b19"
author ebi-gxa
date Fri, 27 Nov 2020 13:49:39 +0000
parents 050fe6894b74
children 8d9ceaec2c7f
files seurat_macros.xml seurat_run_tsne.xml
diffstat 2 files changed, 6 insertions(+), 5 deletions(-) [+]
line wrap: on
line diff
--- a/seurat_macros.xml	Sat Jul 11 08:43:09 2020 -0400
+++ b/seurat_macros.xml	Fri Nov 27 13:49:39 2020 +0000
@@ -1,7 +1,7 @@
 <?xml version="1.0"?>
 <macros>
-    <token name="@VERSION@">0.0.7</token>
-    <token name="@SEURAT_VERSION@">3.1.1</token>
+    <token name="@VERSION@">0.0.8</token>
+    <token name="@SEURAT_VERSION@">3.1.2</token>
     <xml name="requirements">
         <requirements>
             <requirement type="package" version="@VERSION@">seurat-scripts</requirement>
@@ -96,6 +96,7 @@
 
     <token name="@VERSION_HISTORY@"><![CDATA[
 **Version history**
+3.1.2_0.0.8: Upd ate metadata parsing
 
 3.1.1_0.0.7: Exposes perplexity and enables tab input.
 
--- a/seurat_run_tsne.xml	Sat Jul 11 08:43:09 2020 -0400
+++ b/seurat_run_tsne.xml	Fri Nov 27 13:49:39 2020 +0000
@@ -1,4 +1,4 @@
-<tool id="seurat_run_tsne" name="Seurat RunTSNE" version="@SEURAT_VERSION@+galaxy1">
+<tool id="seurat_run_tsne" name="Seurat RunTSNE" version="@SEURAT_VERSION@+galaxy0">
     <description>run t-SNE dimensionality reduction</description>
     <macros>
         <import>seurat_macros.xml</import>
@@ -66,8 +66,8 @@
 
     <tests>
         <test>
-            <param name="input" ftype="rdata" value="out_findclust.rds"/>
-            <output name="rds_seurat_file" ftype="rdata" value="out_runtsne.rds" compare="sim_size"/>
+            <param name="rds_seurat_file" ftype="rdata" value="pca_seurat.rds"/>
+            <output name="rds_seurat_file" ftype="rdata" value="tsne_seurat.rds" compare="sim_size" delta="1000000" />
         </test>
     </tests>
     <help><![CDATA[