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annotate gdal_macros.xml @ 0:402131c0b42c draft

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planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
author ecology
date Tue, 26 Feb 2019 11:50:55 -0500
parents
children 8c67f7a51e36
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0
402131c0b42c planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
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1 <macros>
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2 <token name="@VERSION@">2.4.0</token>
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3 <xml name="gdal_requirements">
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4 <requirements>
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5 <requirement type="package" version="2.1.0">gdal</requirement>
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6 <requirement type="package" version="3.5.0">geos</requirement>
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7 </requirements>
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8 </xml>
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9
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10 <xml name="gdal_advanced_params_select">
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11 <param name="advanced" type="select" label="Specify advanced parameters">
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12 <option value="simple" selected="true">No, use program defaults.</option>
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13 <option value="advanced">Yes, see full parameter list.</option>
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14 </param>
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15 <when value="simple">
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16 </when>
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17 </xml>
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18
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19 <xml name="gdal_param_te">
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20 <conditional name="condi_te">
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21 <param name="te" type="select" label="Georeferenced extents of output file" help="-te xmin ymin xmax ymax">
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22 <option value="no_te" selected="true">Don't use the -te option</option>
402131c0b42c planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
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23 <option value="te">Use the -te option</option>
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24 </param>
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25 <when value="no_te">
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26 </when>
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27 <when value="te">
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28 <param name="xmin" type="float" label="xmin" value="0" min="0" help="In target SRS by default, or in the SRS specified with -te_srs"/>
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29 <param name="ymin" type="float" label="ymin" value="0" min="0" help="In target SRS by default, or in the SRS specified with -te_srs"/>
402131c0b42c planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
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30 <param name="xmax" type="float" label="xmax" value="0" min="0" help="In target SRS by default, or in the SRS specified with -te_srs"/>
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31 <param name="ymax" type="float" label="ymax" value="0" min="0" help="In target SRS by default, or in the SRS specified with -te_srs"/>
402131c0b42c planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
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32 </when>
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33 </conditional>
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34 </xml>
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35
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36 <xml name="gdal_param_r">
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37 <conditional name="condi_resample">
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38 <param label="Use a resampling method" help="-r resampling algorithm" name="resample" type="select">
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39 <option value="no_resampling" selected="true">Don't use a resampling method</option>
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40 <option value="resampling">Use a resampling method, option -r</option>
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41 </param>
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42 <when value="resampling">
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43 <param name="r" type="select" label="Reseampling algorithm" >
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44 <option value="nearest" selected="true"/>
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45 <option value="bilinear"/>
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46 <option value="cubic"/>
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47 <option value="cubicspline"/>
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48 <option value="lanczos"/>
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49 <option value="average"/>
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50 <option value="mode"/>
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51 <option value="max"/>
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52 <option value="min"/>
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53 <option value="med">Median resampling</option>
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54 <option value="q1">First quartile resampling</option>
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55 <option value="q2">Third quartile resampling</option>
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56 </param>
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57 </when>
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58 <when value="no_resampling">
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59 </when>
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60 </conditional>
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61 </xml>
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62
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63 <xml name="gdal_param_tr">
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64 <conditional name="condi_tr">
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65 <param name="tr" type="select" label="Set the ouput file resolution" help="-tr xres yres. Set output file resolution (in target georeferenced units)">
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66 <option value="no_tr" selected="true">Don't use the -tr option</option>
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67 <option value="tr">Use the -tr option</option>
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68 </param>
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69 <when value="no_tr">
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70 </when>
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71 <when value="tr">
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72 <param name="xres" type="float" label="xres" value="0" min="0"/>
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73 <param name="yres" type="float" label="yres" value="0" min="0"/>
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74 </when>
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75 </conditional>
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76 </xml>
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77
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78 <xml name="gdal_param_b">
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79 <param name="b" type="text" label="Select an input band band for output" help="eg : -b band -b 1 -b 2 -b 3. Bands are numbered from 1. Multiple -b switches may be used to select a set of input bands to write to the output file, or to reorder bands." value=""/>
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80 </xml>
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81
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82 <xml name="gdal_param_tap">
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83 <param name="tap" label="Align the coordinates" help="-tap Target Aligned Pixel, align the coordinates of the extent of the output file to the values of the -tr, such that the aligned extent includes the minimum extent" type="boolean" truevalue="-tap" falsevalue="" checked="false" />
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84 </xml>
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85
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86 <xml name="gdal_param_separate">
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87 <param name="separate" type="boolean" truevalue="-separate" falsevalue="" checked="false" label="Place each input file into a separate band" help="-separate. In that case, only the first band of each dataset will be placed into a new band. Contrary to the default mode, it is not required that all bands have the same datatype" />
402131c0b42c planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
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88 </xml>
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89
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90 <xml name="gdal_param_a_srs">
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91 <param name="a_srs" type="text" label="Override the projection for the output file" help="-a_srs srs_def. The srs_def may be any of the usual GDAL/OGR forms, complete WKT, PROJ.4, EPSG:n or a file containing the WKT. No reprojection is done" value="" />
402131c0b42c planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
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92 </xml>
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93
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94 <xml name="gdal_param_stats">
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95 <param name="stats" type="boolean" truevalue="-stats" falsevalue="" checked="false" label="Force (re)computation of statistics" help="-stats. Read and display image statistics. Force computation if no statistics are sto.red in an image."/>
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96 </xml>
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97
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98 <xml name="gdal_param_norat">
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99 <param name="norat" type="boolean" truevalue="-norat" falsevalue="" checked="false" help="-norat. Do not copy source RAT into destination dataset." label="Suppress printing of raster attribute table."/>
402131c0b42c planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
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100 </xml>
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101
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102 <xml name="gdal_param_of">
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103 <param name="of" type="select" label="Output format -of" value="Gtiff" help="Select the output format. The default is GeoTIFF (GTiff). A short list of raster formats is currently enable in GalaxyE : GTiff, netCDF and VRT.">
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104 <option value="GTiff">GTiff</option>
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105 <option value="netCDF">Network Common Data Format - netCDF</option>
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106 <option value="VRT">GDAL Virtual - VRT</option>
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107 </param>
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108 </xml>
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109
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110 <xml name="gdal_param_co">
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111 <param name="co" type="text" label="Pass a creation option to the output format driver" help="-co NAME=VALUE. eg : COMPRESS=JPEG" value="" />
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112 </xml>
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113
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114 <xml name="gdal_param_ot">
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115 <param name="ot" type="select" label="Datatype of the output bands" help="-ot Datatype">
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116 <option value="byte">Byte</option>
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117 <option value="int16">Int16</option>
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118 <option value="uint16">UInt16</option>
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119 <option value="uint32">UInt32</option>
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120 <option value="int32">Int32</option>
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121 <option value="float32">Float32</option>
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122 <option value="float64">Float64</option>
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123 <option value="cint16">CInt16</option>
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124 <option value="cint32">CInt32</option>
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125 <option value="cfloat32">CFloat32</option>
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126 <option value="cfloat64">CFloat64</option>
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127 <option value="" selected="true">Select a datatype for the output bands (default)</option>
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128 </param>
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129 </xml>
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130
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131 <!-- need to upgrade gdal version to use
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132 <xml name="gdal_param_oo">
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133 <param name="oo" type="text" label="-oo NAME=VALUE" value="" />
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134 </xml>
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135 -->
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136
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137 <xml name="gdal_input_raster_multiple">
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138 <param type="data" name="input" format="gtiff,tiff,netcdf,VRT,txt,xml" help="Formats currently supported are : GTiff, netCDF and VRT" label="Gdal supported input file" multiple="true"/>
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139 </xml>
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140
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141 <xml name="gdal_output_change_format">
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142 <data name="output" format="GTiff" label="${on_string}.${of}">
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143 <change_format>
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144 <when input="of" value="GTiff" format="tiff"/>
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145 <when input="of" value="netCDF" format="netcdf"/>
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146 <when input="of" value="VRT" format="txt"/>
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147 </change_format>
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148 </data>
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149 </xml>
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150
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151 <xml name="gdal_citation">
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152 <citations>
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153 <citation type="bibtex">
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154 @Manual{,
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155 title = {{GDAL/OGR} Geospatial Data Abstraction software Library},
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156 author = {{GDAL/OGR contributors}},
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157 organization = {Open Source Geospatial Foundation},
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158 year = {2018},
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159 url = {http://gdal.org},
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160 }
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161 </citation>
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162 </citations>
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163 </xml>
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164 </macros>