Mercurial > repos > ecology > gdal_ogr2ogr

comparison ogr2ogr.xml @ 3:e12db3b4d3a6 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyecology/tools-ecology/tree/master/tools/gdal commit b8d429fc9c59d401a4a55fcd806050939ed41b8b
author ecology
date Thu, 20 Jun 2019 06:53:44 -0400
parents 22c54afd1cf3
children
comparison
equal deleted inserted replaced
2:22c54afd1cf3 3:e12db3b4d3a6
3 <macros> 3 <macros>
4 <import>gdal_macros.xml</import> 4 <import>gdal_macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="gdal_requirements" /> 6 <expand macro="gdal_requirements" />
7 <command detect_errors="exit_code"><![CDATA[ 7 <command detect_errors="exit_code"><![CDATA[
8 #if $input.is_of_type("tabular")
9 cp '$input' '$input''.tsv' &&
10 #end if
8 ogr2ogr 11 ogr2ogr
9 -f '$f' 12 -f '$f'
10 #if $f=='ESRI Shapefile' 13 #if $f=='ESRI Shapefile'
11 'shapefile.shp' 14 'shapefile.shp'
12 #else 15 #else
13 'output' 16 'output'
14 #end if 17 #end if
15 #if $input.is_of_type("shp") 18 #if $input.is_of_type("shp")
16 ${os.path.join( $input.extra_files_path, 'shapefile.shp' )} 19 ${os.path.join( $input.extra_files_path, 'shapefile.shp' )}
17 #else 20 #else if $input.is_of_type("tabular")
21 '$input''.tsv'
22 #else
18 '$input' 23 '$input'
24 #end if
25 #if $settings.advanced=='advanced'
26 #for $i in $settings.series_oo
27 #if str('${i.oo}').strip()!=''
28 -oo ${i.oo}
29 #end if
30 #end for
19 #end if 31 #end if
20 #if $f=='ESRI Shapefile' 32 #if $f=='ESRI Shapefile'
21 && 33 &&
22 mkdir ${shapefile.extra_files_path} && 34 mkdir ${shapefile.extra_files_path} &&
23 mv shapefile.* ${shapefile.extra_files_path} 35 mv shapefile.* ${shapefile.extra_files_path}
24 #end if 36 #end if
25 ]]></command> 37 ]]></command>
26 <inputs> 38 <inputs>
27 <param type="data" name="input" format="shp,xml,json,txt" label="Gdal supported input file" help="http://www.gdal.org/ogr_formats.html"/> 39 <param type="data" name="input" format="shp,xml,json,tabular,txt" label="Gdal supported input file" help="http://www.gdal.org/ogr_formats.html"/>
28 <param type="select" name="f" label="Conversion format" value="" help="Select the format to convert your input file. Currently supported : Shapefile, GeoJSON, GML, KML and WFS."> 40 <param type="select" name="f" label="Conversion format" value="" help="Select the format to convert your input file. Currently supported : Shapefile, GeoJSON, GML, KML and WFS.">
29 <option value="ESRI Shapefile">ESRI Shapefile</option> 41 <option value="ESRI Shapefile">ESRI Shapefile</option>
30 <option value="GeoJSON">GEOJSON</option> 42 <option value="GeoJSON">GEOJSON</option>
31 <option value="GML">GML</option> 43 <option value="GML">GML</option>
32 <option value="KML">KML</option> 44 <option value="KML">KML</option>
33 <option value="WFS">WFS</option> 45 <option value="WFS">WFS</option>
34 </param> 46 </param>
47 <conditional name="settings">
48 <expand macro="gdal_advanced_params_select"/>
49 <when value="advanced">
50 <expand macro="gdal_param_oo"/>
51 </when>
52 </conditional>
35 </inputs> 53 </inputs>
36 <outputs> 54 <outputs>
37 <data name="output" from_work_dir="output" format="xml" label="${on_string}.${f}"> 55 <data name="output" from_work_dir="output" format="xml" label="${on_string}.${f}">
38 <filter>f != 'ESRI Shapefile'</filter> 56 <filter>f != 'ESRI Shapefile'</filter>
39 <change_format> 57 <change_format>
55 <composite_data value="shp_compositefiles/shapefile.dbf"/> 73 <composite_data value="shp_compositefiles/shapefile.dbf"/>
56 <composite_data value="shp_compositefiles/shapefile.sbn"/> 74 <composite_data value="shp_compositefiles/shapefile.sbn"/>
57 <composite_data value="shp_compositefiles/shapefile.sbx"/> 75 <composite_data value="shp_compositefiles/shapefile.sbx"/>
58 </param> 76 </param>
59 <param name="f" value="KML"/> 77 <param name="f" value="KML"/>
78 <param name="advanced" value="simple"/>
60 <output file="ogr2ogr_KML.kml" name="output"/> 79 <output file="ogr2ogr_KML.kml" name="output"/>
61 </test> 80 </test>
62 <test> 81 <test>
63 <param name="input" value="shp_compositefiles/shapefile.xml" ftype="shp"> 82 <param name="input" value="shp_compositefiles/shapefile.xml" ftype="shp">
64 <composite_data value="shp_compositefiles/shapefile.shp"/> 83 <composite_data value="shp_compositefiles/shapefile.shp"/>
66 <composite_data value="shp_compositefiles/shapefile.dbf"/> 85 <composite_data value="shp_compositefiles/shapefile.dbf"/>
67 <composite_data value="shp_compositefiles/shapefile.sbn"/> 86 <composite_data value="shp_compositefiles/shapefile.sbn"/>
68 <composite_data value="shp_compositefiles/shapefile.sbx"/> 87 <composite_data value="shp_compositefiles/shapefile.sbx"/>
69 </param> 88 </param>
70 <param name="f" value="GML"/> 89 <param name="f" value="GML"/>
90 <param name="advanced" value="simple"/>
71 <output file="ogr2ogr_GML.gml" name="output"/> 91 <output file="ogr2ogr_GML.gml" name="output"/>
72 </test> 92 </test>
73 <test> 93 <test>
74 <param name="input" value="shp_compositefiles/shapefile.xml" ftype="shp"> 94 <param name="input" value="shp_compositefiles/shapefile.xml" ftype="shp">
75 <composite_data value="shp_compositefiles/shapefile.shp"/> 95 <composite_data value="shp_compositefiles/shapefile.shp"/>
77 <composite_data value="shp_compositefiles/shapefile.dbf"/> 97 <composite_data value="shp_compositefiles/shapefile.dbf"/>
78 <composite_data value="shp_compositefiles/shapefile.sbn"/> 98 <composite_data value="shp_compositefiles/shapefile.sbn"/>
79 <composite_data value="shp_compositefiles/shapefile.sbx"/> 99 <composite_data value="shp_compositefiles/shapefile.sbx"/>
80 </param> 100 </param>
81 <param name="f" value="GeoJSON"/> 101 <param name="f" value="GeoJSON"/>
102 <param name="advanced" value="simple"/>
82 <output file="ogr2ogr_geojson.json" name="output"/> 103 <output file="ogr2ogr_geojson.json" name="output"/>
83 </test> 104 </test>
84 <test> 105 <test>
85 <param name="input" value="ogr2ogr_KML.kml" ftype="xml"/> 106 <param name="input" value="ogr2ogr_KML.kml" ftype="xml"/>
86 <param name="f" value="GeoJSON"/> 107 <param name="f" value="GeoJSON"/>
108 <param name="advanced" value="simple"/>
87 <output file="ogr2ogr_test2_geojson.json" name="output"/> 109 <output file="ogr2ogr_test2_geojson.json" name="output"/>
88 </test> 110 </test>
89 <test> 111 <test>
90 <param name="input" value="ogr2ogr_KML.kml" ftype="xml"/> 112 <param name="input" value="ogr2ogr_KML.kml" ftype="xml"/>
91 <param name="f" value="ESRI Shapefile"/> 113 <param name="f" value="ESRI Shapefile"/>
114 <param name="advanced" value="simple"/>
92 <output file="shp_compositefiles/ogr2ogr_shapefile2.html" name="shapefile"> 115 <output file="shp_compositefiles/ogr2ogr_shapefile2.html" name="shapefile">
93 <extra_files type="file" name="shapefile.dbf" value="shp_compositefiles/ogr2ogr_shapefile2.dbf" compare="sim_size" delta="50"/> 116 <extra_files type="file" name="shapefile.dbf" value="shp_compositefiles/ogr2ogr_shapefile2.dbf" compare="sim_size" delta="50"/>
94 <extra_files type="file" name="shapefile.prj" value="shp_compositefiles/ogr2ogr_shapefile2.prj"/> 117 <extra_files type="file" name="shapefile.prj" value="shp_compositefiles/ogr2ogr_shapefile2.prj"/>
95 <extra_files type="file" name="shapefile.shp" value="shp_compositefiles/ogr2ogr_shapefile2.shp"/> 118 <extra_files type="file" name="shapefile.shp" value="shp_compositefiles/ogr2ogr_shapefile2.shp"/>
96 <extra_files type="file" name="shapefile.shx" value="shp_compositefiles/ogr2ogr_shapefile2.shx"/> 119 <extra_files type="file" name="shapefile.shx" value="shp_compositefiles/ogr2ogr_shapefile2.shx"/>
97 </output> 120 </output>
98 </test> 121 </test>
99 <test> 122 <test>
100 <param name="input" value="ogr2ogr_KML.kml" ftype="xml"/> 123 <param name="input" value="ogr2ogr_KML.kml" ftype="xml"/>
101 <param name="f" value="GML"/> 124 <param name="f" value="GML"/>
125 <param name="advanced" value="simple"/>
102 <output file="ogr2ogr_GML2.gml" name="output"/> 126 <output file="ogr2ogr_GML2.gml" name="output"/>
103 </test> 127 </test>
104 </tests> 128 <test>
129 <param name="input" value="ogr2ogr_fromgbif.tabular" ftype="tabular"/>
130 <param name="f" value="GeoJSON"/>
131 <param name="advanced" value="advanced"/>
132 <param name="oo" value="X_POSSIBLE_NAMES=longitude"/>
133 <param name="oo" value="Y_POSSIBLE_NAMES=latitude"/>
134 <output file="ogr2ogr_gbif_to_json.json" name="output" lines_diff="2"/>
135 </test>
136 </tests>
105 <help><![CDATA[ 137 <help><![CDATA[
106 ======== 138 ========
107 Ogrinfo 139 Ogrinfo
108 ======== 140 ========
109 141