Mercurial > repos > ecology > gdal_ogr2ogr

annotate ogr2ogr.xml @ 3:e12db3b4d3a6 draft default tip

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planemo upload for repository https://github.com/galaxyecology/tools-ecology/tree/master/tools/gdal commit b8d429fc9c59d401a4a55fcd806050939ed41b8b
author ecology
date Thu, 20 Jun 2019 06:53:44 -0400
parents 22c54afd1cf3
children
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402131c0b42c planemo upload for repository https://github.com/galaxyecology/tools-ecology/tools/gdal commit b964e8f7d7bb076d63a1c7bdfbbdba0f9074d517
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1 <tool id="gdal_ogr2ogr" name="OGR2ogr" version="@VERSION@">
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2 <description>converts simple features data between file formats</description>
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3 <macros>
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4 <import>gdal_macros.xml</import>
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5 </macros>
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6 <expand macro="gdal_requirements" />
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7 <command detect_errors="exit_code"><![CDATA[
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8 #if $input.is_of_type("tabular")
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9 cp '$input' '$input''.tsv' &&
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10 #end if
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11 ogr2ogr
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12 -f '$f'
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13 #if $f=='ESRI Shapefile'
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14 'shapefile.shp'
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15 #else
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16 'output'
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17 #end if
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18 #if $input.is_of_type("shp")
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19 ${os.path.join( $input.extra_files_path, 'shapefile.shp' )}
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20 #else if $input.is_of_type("tabular")
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21 '$input''.tsv'
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22 #else
2
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23 '$input'
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24 #end if
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25 #if $settings.advanced=='advanced'
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26 #for $i in $settings.series_oo
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27 #if str('${i.oo}').strip()!=''
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28 -oo ${i.oo}
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29 #end if
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30 #end for
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31 #end if
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32 #if $f=='ESRI Shapefile'
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33 &&
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34 mkdir ${shapefile.extra_files_path} &&
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35 mv shapefile.* ${shapefile.extra_files_path}
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36 #end if
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37 ]]></command>
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38 <inputs>
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39 <param type="data" name="input" format="shp,xml,json,tabular,txt" label="Gdal supported input file" help="http://www.gdal.org/ogr_formats.html"/>
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40 <param type="select" name="f" label="Conversion format" value="" help="Select the format to convert your input file. Currently supported : Shapefile, GeoJSON, GML, KML and WFS.">
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41 <option value="ESRI Shapefile">ESRI Shapefile</option>
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42 <option value="GeoJSON">GEOJSON</option>
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43 <option value="GML">GML</option>
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44 <option value="KML">KML</option>
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45 <option value="WFS">WFS</option>
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46 </param>
3
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47 <conditional name="settings">
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48 <expand macro="gdal_advanced_params_select"/>
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49 <when value="advanced">
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50 <expand macro="gdal_param_oo"/>
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51 </when>
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52 </conditional>
0
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53 </inputs>
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54 <outputs>
2
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55 <data name="output" from_work_dir="output" format="xml" label="${on_string}.${f}">
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56 <filter>f != 'ESRI Shapefile'</filter>
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57 <change_format>
2
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58 <when input="f" value="GeoJSON" format="json"/>
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59 <when input="f" value="GML" format="xml"/>
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60 <when input="f" value="KML" format="xml"/>
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61 <when input="f" value="WFS" format="txt"/>
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62 </change_format>
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63 </data>
2
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64 <data name="shapefile" format="shp" from_work_dir="shapefile" label="${on_string}.shapefile">
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65 <filter>f == 'ESRI Shapefile'</filter>
2
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66 </data>
0
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67 </outputs>
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68 <tests>
2
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69 <test>
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70 <param name="input" value="shp_compositefiles/shapefile.xml" ftype="shp">
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71 <composite_data value="shp_compositefiles/shapefile.shp"/>
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72 <composite_data value="shp_compositefiles/shapefile.shx"/>
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73 <composite_data value="shp_compositefiles/shapefile.dbf"/>
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74 <composite_data value="shp_compositefiles/shapefile.sbn"/>
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75 <composite_data value="shp_compositefiles/shapefile.sbx"/>
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76 </param>
0
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77 <param name="f" value="KML"/>
3
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78 <param name="advanced" value="simple"/>
2
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79 <output file="ogr2ogr_KML.kml" name="output"/>
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80 </test>
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81 <test>
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82 <param name="input" value="shp_compositefiles/shapefile.xml" ftype="shp">
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83 <composite_data value="shp_compositefiles/shapefile.shp"/>
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84 <composite_data value="shp_compositefiles/shapefile.shx"/>
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85 <composite_data value="shp_compositefiles/shapefile.dbf"/>
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86 <composite_data value="shp_compositefiles/shapefile.sbn"/>
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87 <composite_data value="shp_compositefiles/shapefile.sbx"/>
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88 </param>
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89 <param name="f" value="GML"/>
3
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90 <param name="advanced" value="simple"/>
2
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91 <output file="ogr2ogr_GML.gml" name="output"/>
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92 </test>
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93 <test>
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94 <param name="input" value="shp_compositefiles/shapefile.xml" ftype="shp">
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95 <composite_data value="shp_compositefiles/shapefile.shp"/>
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96 <composite_data value="shp_compositefiles/shapefile.shx"/>
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97 <composite_data value="shp_compositefiles/shapefile.dbf"/>
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98 <composite_data value="shp_compositefiles/shapefile.sbn"/>
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99 <composite_data value="shp_compositefiles/shapefile.sbx"/>
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100 </param>
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101 <param name="f" value="GeoJSON"/>
3
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102 <param name="advanced" value="simple"/>
2
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103 <output file="ogr2ogr_geojson.json" name="output"/>
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104 </test>
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105 <test>
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106 <param name="input" value="ogr2ogr_KML.kml" ftype="xml"/>
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107 <param name="f" value="GeoJSON"/>
3
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108 <param name="advanced" value="simple"/>
2
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109 <output file="ogr2ogr_test2_geojson.json" name="output"/>
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110 </test>
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111 <test>
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112 <param name="input" value="ogr2ogr_KML.kml" ftype="xml"/>
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113 <param name="f" value="ESRI Shapefile"/>
3
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114 <param name="advanced" value="simple"/>
2
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115 <output file="shp_compositefiles/ogr2ogr_shapefile2.html" name="shapefile">
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116 <extra_files type="file" name="shapefile.dbf" value="shp_compositefiles/ogr2ogr_shapefile2.dbf" compare="sim_size" delta="50"/>
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117 <extra_files type="file" name="shapefile.prj" value="shp_compositefiles/ogr2ogr_shapefile2.prj"/>
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118 <extra_files type="file" name="shapefile.shp" value="shp_compositefiles/ogr2ogr_shapefile2.shp"/>
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119 <extra_files type="file" name="shapefile.shx" value="shp_compositefiles/ogr2ogr_shapefile2.shx"/>
0
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120 </output>
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121 </test>
2
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122 <test>
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123 <param name="input" value="ogr2ogr_KML.kml" ftype="xml"/>
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124 <param name="f" value="GML"/>
3
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125 <param name="advanced" value="simple"/>
2
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126 <output file="ogr2ogr_GML2.gml" name="output"/>
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127 </test>
3
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128 <test>
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129 <param name="input" value="ogr2ogr_fromgbif.tabular" ftype="tabular"/>
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130 <param name="f" value="GeoJSON"/>
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131 <param name="advanced" value="advanced"/>
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132 <param name="oo" value="X_POSSIBLE_NAMES=longitude"/>
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133 <param name="oo" value="Y_POSSIBLE_NAMES=latitude"/>
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134 <output file="ogr2ogr_gbif_to_json.json" name="output" lines_diff="2"/>
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135 </test>
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136 </tests>
0
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137 <help><![CDATA[
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138 ========
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139 Ogrinfo
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140 ========
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141
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142 **What it does**
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143
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144 The Ogrinfo program lists various information about an OGR supported vector dataset.
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145
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146 |
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147
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148 **How to use it**
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149
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150 Select from history a suported vector file.
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151
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152 |
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153
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154 **Advanced options and sources**
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155
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156 To see complete details and help section please check the official gdal sources.
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157
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158 http://www.gdal.org
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159
2
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160 https://gdal.org/programs/ogr2ogr.html
0
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161
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162 http://download.osgeo.org/gdal/workshop/foss4ge2015/workshop_gdal.pdf
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163 ]]></help>
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164 <expand macro="gdal_citation"/>
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165 </tool>