Mercurial > repos > enios > nc_rna
diff discardfasta.xml @ 15:97abe4dc3ee3 draft
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author | enios |
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date | Sat, 22 May 2021 07:30:24 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/discardfasta.xml Sat May 22 07:30:24 2021 +0000 @@ -0,0 +1,17 @@ +<tool id="discardfasta" name="discardFasta" > + <description>"discard_fasta_sequences_less_than_specific_length"</description> + <requirements> + <container type="docker">bianca7/lncrna:discard_fasta</container> + </requirements> + <command><![CDATA[perl /discard_fasta.pl $length $fasta_file > $out + ]]></command> + <inputs> + <param type="data" name="fasta_file" format="fasta" /> + <param type="integer" value="200" name="length" label="length cut off" /> + </inputs> + <outputs> + <data name="out" format="fasta" /> + </outputs> +</tool> + +