Mercurial > repos > erasmus-medical-center > dr_disco

annotate test-data/classify_test_16.test-02.out.dbed @ 5:76a3992021c1 draft

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planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/galaxytools-emc/tree/master/tools/dr-disco commit f6f9296f2774ba81f81f57d5f80d597d008e6a1c
author erasmus-medical-center
date Thu, 14 Sep 2017 05:09:34 -0400
parents 5348cfd3ba5c
children c3ce472a315f
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3
5348cfd3ba5c planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/galaxytools-emc/tree/master/tools/dr-disco commit b6ccc6d8a9a9061207040561b494b7cf2ee3f885
erasmus-medical-center
parents:
diff changeset
1 chr-A pos-A direction-A pos-A-acceptor pos-A-donor chr-B pos-B direction-B pos-A-acceptor pos-A-donor genomic-distance filter-status circRNA intronic/exonic score soft+hardclips n-split-reads n-discordant-reads n-edges n-nodes-A n-nodes-B n-splice-junc-A n-splice-junc-B entropy-bp-edge entropy-all-edges bp-pos-stddev entropy-disco-bps lr-A-slope lr-A-intercept lr-A-rvalue lr-A-pvalue lr-A-stderr lr-B-slope lr-B-intercept lr-B-rvalue lr-B-pvalue lr-B-stderr disco/split clips/score nodes/edge data-structure
5348cfd3ba5c planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/galaxytools-emc/tree/master/tools/dr-disco commit b6ccc6d8a9a9061207040561b494b7cf2ee3f885
erasmus-medical-center
parents:
diff changeset
2 chr21 39817544 - 140 0 chr21 42880007 + 0 140 3062463 valid linear exonic 253 170 85 6 5 2 4 1 0 0.8111 0.8497 0.0000 0.9535 0.7247 63.7843 0.8440 0.0000 0.0559 0.3651 17.3030 0.8378 0.0000 0.0289 0.0706 0.3360 1.2000 chr21:39817544/39817545(-)->chr21:42880007/42880008(+):(spanning_paired_1:65,spanning_paired_2:65,spanning_singleton_1:2,spanning_singleton_1_r:3,spanning_singleton_2:2,spanning_singleton_2_r:3)&chr21:39817544/39817545(-)->chr21:42879876/42879877(+):(discordant_mates:10,spanning_paired_1:6,spanning_paired_1_t:1,spanning_paired_2:6,spanning_paired_2_t:1,spanning_singleton_1_r:2,spanning_singleton_2_r:2)&chr21:39817544/39817545(-)->chr21:42878371/42878372(+):(discordant_mates:2,spanning_paired_1:1,spanning_paired_1_t:1,spanning_paired_2:1,spanning_paired_2_t:1,spanning_singleton_1_r:1,spanning_singleton_2_r:1)&chr21:39846044/39846045(-)->chr21:42879876/42879877(+):(spanning_paired_1:2,spanning_paired_2:2)&chr21:39817544/39817545(-)->chr21:42876293/42876294(+):(spanning_paired_1:1,spanning_paired_2:1)
5348cfd3ba5c planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/galaxytools-emc/tree/master/tools/dr-disco commit b6ccc6d8a9a9061207040561b494b7cf2ee3f885
erasmus-medical-center
parents:
diff changeset
3 chr21 39877811 - 98 0 chr21 42873374 + 0 98 2995563 valid linear intronic 91 42 21 28 1 1 1 0 0 0.9528 0.9528 0.0000 0.8200 2.9207 17.3314 0.9125 0.0000 0.1910 1.5880 68.1747 0.8769 0.0000 0.1269 1.3333 0.2308 2.0000 chr21:39877811/39877812(-)->chr21:42873374/42873375(+):(discordant_mates:56,spanning_paired_1:12,spanning_paired_1_t:9,spanning_paired_2:12,spanning_paired_2_t:9)