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comparison dr-disco_fix.xml @ 3:5348cfd3ba5c draft

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planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/galaxytools-emc/tree/master/tools/dr-disco commit b6ccc6d8a9a9061207040561b494b7cf2ee3f885
author erasmus-medical-center
date Thu, 10 Aug 2017 05:38:27 -0400
parents 173ca9768e22
children 922b52cf9b35
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2:173ca9768e22 3:5348cfd3ba5c
6 6
7 <expand macro="requirements" /> 7 <expand macro="requirements" />
8 <expand macro="version_command" /> 8 <expand macro="version_command" />
9 9
10 <command detect_errors="exit_code"><![CDATA[ 10 <command detect_errors="exit_code"><![CDATA[
11 dr-disco fix '${alignment_fixed}' '${star_discordant_alignment}' 11 dr-disco fix
12 '${star_discordant_alignment}'
13 '${alignment_fixed}'
12 ]]></command> 14 ]]></command>
15
13 <inputs> 16 <inputs>
14 <param name="star_discordant_alignment" type="data" format="bam" label="Discordant alignment file of STAR" /> 17 <param name="star_discordant_alignment" type="data" format="bam" label="Discordant alignment file of STAR" />
15 </inputs> 18 </inputs>
19
16 <outputs> 20 <outputs>
17 <data name="alignment_fixed" format="bam" label="${tool.name} on ${star_discordant_alignment}" /> 21 <data name="alignment_fixed" format="bam" label="${tool.name} on ${star_discordant_alignment}" />
18 </outputs> 22 </outputs>
19 23
20 <tests> 24 <tests>