Mercurial > repos > erick-antezana > onto-toolkit
view onto-toolkit/suite_config.xml @ 1:d2d26d330236
v 0.2: tools added for OPPL-galaxy
author | easr |
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date | Wed, 11 Apr 2012 10:33:41 +0200 |
parents | 4484575e4186 |
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<suite id="ONTO-ToolKit" name="Suite of OBO Ontology manipulation tools" version="0.2"> <description>This suite contains tools for managing ontologies that are represented in the OBO flat file format</description> <tool id="get_ancestor_terms" name="Get the ancestor terms of a given OBO term" version="1.22"> <description> Collects the ancestor terms from a given term in the given OBO ontology</description> </tool> <tool id="get_child_terms" name="Get the child terms of a given OBO term" version="1.22"> <description>Collects the child terms from a given term in the given OBO ontology</description> </tool> <tool id="get_descendent_terms" name="Get the descendent terms of a given OBO term" version="1.22"> <description>Collects the descendent terms from a given term in the given OBO ontology</description> </tool> <tool id="get_intersection_ontology_from" name="Gets an intersection ontology from given OBO ontologies" version="1.22"> <description>Provides an intersection of the given ontologies (in OBO format)</description> </tool> <tool id="get_list_intersection_from" name="Get the overlapping terms from a given set OBO terms" version="1.22"> <description>Collects common OBO terms from a given set of list containing OBO terms</description> </tool> <tool id="get_parent_terms_by_relationship_type" name="Get the terms of a given OBO term through a concrete relationship type" version="1.22"> <description>Collects the terms from a given term in the given OBO ontology, filtered by a relationship type</description> </tool> <tool id="get_parent_terms" name="Get the parent terms of a given OBO term" version="1.22"> <description>Collects the parent terms from a given term in the given OBO ontology</description> </tool> <tool id="get_relationship_types" name="Get all the relationship types in an ontology" version="1.22"> <description>Collects the relationship types in the given OBO ontology</description> </tool> <tool id="get_subontology_from" name="Get subontology from a given OBO term" version="1.22"> <description>Extracts a subontology (in OBO format) of a given ontology having as root node the provided term ID</description> </tool> <tool id="get_terms_by_relationship_type" name="Get the terms that are related by a concrete relationship type" version="1.22"> <description>Collects the terms that are related by a concrete relationship type</description> </tool> <tool id="obo2owl" name="Convert OBO to OWL" version="1.22"> <description>Converts an OBO formatted ontology to OWL format</description> </tool> <tool id="obo2rdf" name="Convert OBO to RDF" version="1.22"> <description>Converts an OBO formatted ontology to RDF/XML format</description> </tool> <tool id="obo2tran" name="Convert OBO to RDF (tc)" version="1.22"> <description>Converts an OBO formatted ontology to RDF/XML format with transitive closure</description> </tool> <tool id="term_id_vs_term_def" name="Get all the term IDs and term definitions of a given OBO ontology" version="1.22"> <description>Get all the term IDs and term definitions of a given OBO ontology</description> </tool> <tool id="term_id_vs_term_name" name="Get all the term IDs and term names of a given OBO ontology" version="1.22"> <description>Get all the term IDs and term names of a given OBO ontology</description> </tool> </suite>