Mercurial > repos > estrain > srst2
diff srst2v2.xml @ 1:43cc60256036 draft
Uploaded
author | estrain |
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date | Sat, 18 May 2019 19:09:56 -0400 |
parents | efc202baae1f |
children | 6787d952242e |
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--- a/srst2v2.xml Sun Dec 03 13:28:11 2017 -0500 +++ b/srst2v2.xml Sat May 18 19:09:56 2019 -0400 @@ -1,6 +1,6 @@ -<tool id="srst2" name="SRST2 - Short Read Sequence Typer (v2)" version="0.2.0"> +<tool id="srst2" name="SRST2 - Short Read Sequence Typer (v2)" version="0.2.3"> <requirements> - <requirement type="package" version="0.2.0">srst2</requirement> + <requirement type="package" version="0.2.3">srst2</requirement> </requirements> <command detect_errors="exit_code"><![CDATA[ #if $paired_conditional.sPaired == "paired" @@ -76,16 +76,17 @@ <option value="paired">Paired-end</option> </param> <when value="single"> - <param name="fastq1" type="data" format="fastq" label="FASTQ file" help="FASTQ" /> + <param name="fastq1" type="data" format="fastq,fastqsanger" label="FASTQ file" help="FASTQ" /> </when> <when value="paired"> - <param name="fastq1" type="data" format="fastq" label="Forward FASTQ file" help="FASTQ" /> - <param name="fastq2" type="data" format="fastq" label="Reverse FASTQ file" help="FASTQ" /> + <param name="fastq1" type="data" format="fastq,fastqsanger" label="Forward FASTQ file" help="FASTQ" /> + <param name="fastq2" type="data" format="fastq,fastqsanger" label="Reverse FASTQ file" help="FASTQ" /> </when> </conditional> <conditional name="job_type"> <param name="job" type="select" label="MLST or Gene Presence/Absence?"> + <option value="none">none</option> <option value="mlst">MLST</option> <option value="gene">Gene</option> </param>