Mercurial > repos > estrain > sum_fastqc

changeset 11:d8ff95d96848 draft default tip

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Uploaded
author estrain
date Thu, 18 Sep 2025 15:19:38 +0000
parents 8c2ad48a2eba
children
files sum_fastqc/sum_fastqc.pl sum_fastqc/sum_fastqc.xml
diffstat 2 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/sum_fastqc/sum_fastqc.pl	Thu Sep 18 15:14:19 2025 +0000
+++ b/sum_fastqc/sum_fastqc.pl	Thu Sep 18 15:19:38 2025 +0000
@@ -29,7 +29,7 @@
 sub print_stats {
   $infile = shift;
   # First 10 lines of raw FASTQC contain basic overview
-  @sumlines=`head -n 10 $infile`;
+  @sumlines=`head -n 11 $infile`;
   chomp(@sumlines);
 
   # Sequence level Q scores are buried in the middle of the file
--- a/sum_fastqc/sum_fastqc.xml	Thu Sep 18 15:14:19 2025 +0000
+++ b/sum_fastqc/sum_fastqc.xml	Thu Sep 18 15:19:38 2025 +0000
@@ -1,4 +1,4 @@
-<tool id="sum_fastqc" name="sum_fastqc" version="0.22">
+<tool id="sum_fastqc" name="sum_fastqc" version="0.23">
     <description>summarizes raw FASTQC output</description>
     <requirements>
     </requirements>