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Init repository for [downloader_bank_hmdb]
author fgiacomoni
date Tue, 14 Jan 2020 05:21:23 -0500
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children be504ccbc41c
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-1:000000000000 0:7c9269bded0e
1 FROM ubuntu:18.04
2
3 # set author
4 MAINTAINER Franck Giacomoni <franck.giacomoni.fr>
5
6 ###
7 ### [CONTAINER CORE FUNCTIONS]:
8 ### xxxx
9 ### xxxx
10 ### [NOTES]
11 ### xxxx
12
13 ENV PATH /opt/conda/bin:$PATH
14
15 RUN apt-get -y update &&\
16 apt-get -y install build-essential \
17 cpanminus \
18 gzip \
19 wget \
20 bzip2 \
21 ca-certificates \
22 libglib2.0-0 \
23 libxext6 \
24 libsm6 \
25 libxrender1 \
26 libtext-csv-perl \
27 libxml-twig-perl \
28 libfile-share-perl
29
30 RUN wget --quiet https://repo.anaconda.com/archive/Anaconda3-5.3.0-Linux-x86_64.sh -O ~/anaconda.sh && \
31 /bin/bash ~/anaconda.sh -b -p /opt/conda && \
32 rm ~/anaconda.sh && \
33 ln -s /opt/conda/etc/profile.d/conda.sh /etc/profile.d/conda.sh && \
34 echo ". /opt/conda/etc/profile.d/conda.sh" >> ~/.bashrc && \
35 echo "conda activate base" >> ~/.bashrc
36
37 RUN cpan install ExtUtils::MakeMaker && \
38 cpan install File::ShareDir::Install && \
39 cpan install Module::Release &&\
40 cpan install Archive::Zip &&\
41
42 apt -y install git &&\
43 apt -y install python2.7 python-pip &&\
44 apt -y install virtualenv &&\
45 pip install "pip>=7" &&\
46 pip install -U git+git://github.com/galaxyproject/planemo.git &&\
47
48 apt-get autoremove -y && \
49 apt-get clean && \
50 rm -rf /var/lib/apt/lists/* /tmp/* /var/tmp/*
51