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comparison qiime2/qiime_longitudinal_nmit.xml @ 4:914fa4daf16a draft

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Fixes
author florianbegusch
date Wed, 31 Jul 2019 03:06:00 -0400
parents 370e0b6e9826
children f190567fe3f6
comparison
equal deleted inserted replaced
3:558645416841 4:914fa4daf16a
6 </requirements> 6 </requirements>
7 <command><![CDATA[ 7 <command><![CDATA[
8 qiime longitudinal nmit 8 qiime longitudinal nmit
9 9
10 --i-table=$itable 10 --i-table=$itable
11 --p-individual-id-column="$pindividualidcolumn" 11
12
13
14
15 #if '__sq__' in str($pindividualidcolumn):
16 #set $pindividualidcolumn_temp = $pindividualidcolumn.replace('__sq__', "'")
17 #set $pindividualidcolumn = $pindividualidcolumn_temp
18 #end if
19
20 #if str($pindividualidcolumn):
21 --p-individual-id-column="$pindividualidcolumn"
22 #end if
23
24
25
12 26
13 #if str($pcorrmethod) != 'None': 27 #if str($pcorrmethod) != 'None':
14 --p-corr-method=$pcorrmethod 28 --p-corr-method=$pcorrmethod
15 #end if 29 #end if
16 30
48 <option selected="True" value="None">Selection is Optional</option> 62 <option selected="True" value="None">Selection is Optional</option>
49 <option value="fro">fro</option> 63 <option value="fro">fro</option>
50 <option value="nuc">nuc</option> 64 <option value="nuc">nuc</option>
51 </param> 65 </param>
52 66
53 <repeat name="input_files_mmetadatafile" optional="True" title="--m-metadata-file"> 67 <repeat name="input_files_mmetadatafile" optional="True" title="--m-metadata-file [required]">
54 <param label="--m-metadata-file: Metadata file or artifact viewable as metadata. This option may be supplied multiple times to merge metadata. [optional]" name="additional_input" type="data" format="tabular,qza,no_unzip.zip" /> 68 <param label="--m-metadata-file: Metadata file or artifact viewable as metadata. This option may be supplied multiple times to merge metadata. [optional]" name="additional_input" type="data" format="tabular,qza,no_unzip.zip" />
55 </repeat> 69 </repeat>
56 70
57 </inputs> 71 </inputs>
58 <outputs> 72 <outputs>