Mercurial > repos > florianbegusch > qiime2_suite
diff qiime2/qiime_feature-table_transpose.xml @ 29:3ba9833030c1 draft
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author | florianbegusch |
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date | Fri, 04 Sep 2020 13:12:49 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/qiime2/qiime_feature-table_transpose.xml Fri Sep 04 13:12:49 2020 +0000 @@ -0,0 +1,55 @@ +<?xml version="1.0" ?> +<tool id="qiime_feature-table_transpose" name="qiime feature-table transpose" + version="2020.8"> + <description>Transpose a feature table.</description> + <requirements> + <requirement type="package" version="2020.8">qiime2</requirement> + </requirements> + <command><![CDATA[ +qiime feature-table transpose + +--i-table=$itable + +--o-transposed-feature-table=otransposedfeaturetable + +#if str($examples) != 'None': +--examples=$examples +#end if + +; +cp otransposedfeaturetable.qza $otransposedfeaturetable + + ]]></command> + <inputs> + <param format="qza,no_unzip.zip" label="--i-table: ARTIFACT FeatureTable[Frequency] The feature table to be transposed. [required]" name="itable" optional="False" type="data" /> + <param label="--examples: Show usage examples and exit." name="examples" optional="False" type="data" /> + + </inputs> + + <outputs> + <data format="qza" label="${tool.name} on ${on_string}: transposedfeaturetable.qza" name="otransposedfeaturetable" /> + + </outputs> + + <help><![CDATA[ +Transpose a feature table. +############################################################### + +Transpose the rows and columns (typically samples and features) of a +feature table. + +Parameters +---------- +table : FeatureTable[Frequency] + The feature table to be transposed. + +Returns +------- +transposed_feature_table : FeatureTable[Frequency] + The resulting transposed feature table. + ]]></help> + <macros> + <import>qiime_citation.xml</import> + </macros> + <expand macro="qiime_citation"/> +</tool> \ No newline at end of file