|
29
|
1 <?xml version="1.0" ?>
|
|
|
2 <tool id="qiime_feature-table_transpose" name="qiime feature-table transpose"
|
|
|
3 version="2020.8">
|
|
|
4 <description>Transpose a feature table.</description>
|
|
|
5 <requirements>
|
|
|
6 <requirement type="package" version="2020.8">qiime2</requirement>
|
|
|
7 </requirements>
|
|
|
8 <command><![CDATA[
|
|
|
9 qiime feature-table transpose
|
|
|
10
|
|
|
11 --i-table=$itable
|
|
|
12
|
|
|
13 --o-transposed-feature-table=otransposedfeaturetable
|
|
|
14
|
|
|
15 #if str($examples) != 'None':
|
|
|
16 --examples=$examples
|
|
|
17 #end if
|
|
|
18
|
|
|
19 ;
|
|
|
20 cp otransposedfeaturetable.qza $otransposedfeaturetable
|
|
|
21
|
|
|
22 ]]></command>
|
|
|
23 <inputs>
|
|
|
24 <param format="qza,no_unzip.zip" label="--i-table: ARTIFACT FeatureTable[Frequency] The feature table to be transposed. [required]" name="itable" optional="False" type="data" />
|
|
|
25 <param label="--examples: Show usage examples and exit." name="examples" optional="False" type="data" />
|
|
|
26
|
|
|
27 </inputs>
|
|
|
28
|
|
|
29 <outputs>
|
|
|
30 <data format="qza" label="${tool.name} on ${on_string}: transposedfeaturetable.qza" name="otransposedfeaturetable" />
|
|
|
31
|
|
|
32 </outputs>
|
|
|
33
|
|
|
34 <help><![CDATA[
|
|
|
35 Transpose a feature table.
|
|
|
36 ###############################################################
|
|
|
37
|
|
|
38 Transpose the rows and columns (typically samples and features) of a
|
|
|
39 feature table.
|
|
|
40
|
|
|
41 Parameters
|
|
|
42 ----------
|
|
|
43 table : FeatureTable[Frequency]
|
|
|
44 The feature table to be transposed.
|
|
|
45
|
|
|
46 Returns
|
|
|
47 -------
|
|
|
48 transposed_feature_table : FeatureTable[Frequency]
|
|
|
49 The resulting transposed feature table.
|
|
|
50 ]]></help>
|
|
|
51 <macros>
|
|
|
52 <import>qiime_citation.xml</import>
|
|
|
53 </macros>
|
|
|
54 <expand macro="qiime_citation"/>
|
|
|
55 </tool> |
