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comparison rgclustal/rgClustal_testout.fasta @ 0:8888e4e3f169

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Migrated tool version 0.1 from old tool shed archive to new tool shed repository
author fubar
date Tue, 07 Jun 2011 17:05:43 -0400
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-1:000000000000 0:8888e4e3f169
1 >c_briggsae-chrII_+_
2 ---ATGAGCTTCCACAAAAGCATGAGCTTT
3 CTCAGCTTCTGCCACATCAGCATTCAAATG
4 ATC
5 >c_brenneri-Cbre_Contig60_+_
6 ---ATGAGCCTCCACAACAGCATGATTTTT
7 CTCGGCTTCCGCCACATCCGCATTCAAATG
8 ATC
9 >c_remanei-Crem_Contig172_-_
10 ---ATGAGCCTCTACAACCGCATGATTCTT
11 TTCAGCCTCTGCCACGTCCGCATTCAAATG
12 CTC
13 >c_elegans-II_+_
14 ---ATGAGCCTCTACTACAGCATGATTCTT
15 CTCAGCTTCTGCAACGTCAGCATTCAGATG
16 ATC
17 >c_briggsae-chrII_+_bar
18 ---CCGGAGTCGATCCCTGAAT--------
19 ------------------------------
20 ---
21 >c_brenneri-Cbre_Contig60fee_+_
22 ---ACGAAGTCGATCCCTGAAA--------
23 -TCAGATGAGCGGTTGACCA---GAGAACA
24 ACC
25 >c_remanei-Crem_Contig172zot_-_
26 ---ACGAAGTCGGTCCCTATAAGGTATGAT
27 TTTATATGA----TGTACCATAAGGAAATA
28 GTC
29 >c_elegans-II_+_meh
30 ---ACGAAGTCGGTCCCTGAAC--AATTAT
31 TT----TGA----TATA---GAAAGAAACG
32 GTA
33 >c_briggsae-chrIfooI_+_
34 CGCACAAATATGATGCACAAATCCACAACC
35 TAAAGCATCTCCGATAACGTTGACCGAAGT
36 ---
37 >c_brenneri-Cbre_Contig60gak_+_
38 CGCACAAATGTAGTGGACAAATCCGCATCC
39 CAAAGCGTCTCCGATAACATTTACCGAAGT
40 ---
41 >c_remanei-Crem_Contig172foo_-_
42 AGCACAAATGTAATGAACGAATCCGCATCC
43 CAACGCATCGCCAATCACATTCACAGATGT
44 ---
45 >c_elegans-II_+_more
46 TGCACAAATGTGATGAACGAATCCACATCC
47 CAATGCATCACCGATCACATTGACAGATGT
48 ---