Mercurial > repos > fubar > egapx_runner
diff ui/assets/config/process_resources.config @ 0:d9c5c5b87fec draft
planemo upload for repository https://github.com/ncbi/egapx commit 8173d01b08d9a91c9ec5f6cb50af346edc8020c4
author | fubar |
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date | Sat, 03 Aug 2024 11:16:53 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/ui/assets/config/process_resources.config Sat Aug 03 11:16:53 2024 +0000 @@ -0,0 +1,51 @@ +// Part of nextflow config describing resource requirements for EGAPx processes +// We rely on labels to define 3 tiers of processes - default, big, and huge. +// Make sure that executor you use supports job memory and CPU requirements +process { + memory = 60.GB + cpus = 7 + time = 6.h + errorStrategy = 'retry' + maxRetries = 3 + + withLabel: 'big_job' { + memory = 120.GB + cpus = 15 + } + + withLabel: 'huge_job' { + memory = 200.GB + cpus = 31 + } + + withLabel: 'long_job' { + time = 16.h + } +} + +profiles { + + stubrun { + + process { + memory = 1.GB + cpus = 1 + time = 1.h + + withLabel: 'big_job' { + memory = 1.GB + cpus = 1 + } + + withLabel: 'huge_job' { + memory = 1.GB + cpus = 1 + } + + withLabel: 'long_job' { + time = 1.h + } + } + } + +}