jbrowse2: x/static/js/7087.79101e8e.chunk.js.map annotate

annotate x/static/js/7087.79101e8e.chunk.js.map @ 125:49f3d3878413 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 5ea1f9c1eef1de76232e69aa6d34cda77d90d566

author	fubar
date	Sat, 05 Oct 2024 23:58:05 +0000
parents
children

rev	line source
125 49f3d3878413 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 5ea1f9c1eef1de76232e69aa6d34cda77d90d566 fubar parents: diff changeset	1 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React, { lazy } from 'react'\nimport { Link, Typography } from '@mui/material'\nimport {\n getEnv,\n getSession,\n SimpleFeature,\n SimpleFeatureSerialized,\n} from '@jbrowse/core/util'\nimport { BaseCard } from '@jbrowse/core/BaseFeatureWidget/BaseFeatureDetail'\nimport { ViewType } from '@jbrowse/core/pluggableElementTypes'\n\n// locals\nimport { VariantFeatureWidgetModel } from './stateModelFactory'\n\n// lazies\nconst BreakendMultiLevelOptionDialog = lazy(\n () => import('./BreakendMultiLevelOptionDialog'),\n)\nconst BreakendSingleLevelOptionDialog = lazy(\n () => import('./BreakendSingleLevelOptionDialog'),\n)\n\nfunction LocStringList({\n locStrings,\n model,\n}: {\n locStrings: string[]\n model: VariantFeatureWidgetModel\n}) {\n const session = getSession(model)\n return (\n <div>\n <Typography>Navigate to breakend endpoint in linear view:</Typography>\n <ul>\n {locStrings.map((locString, index) => (\n /* biome-ignore lint/suspicious/noArrayIndexKey: */\n <li key={`${locString}-${index}`}>\n {locString}{' '}\n <Link\n href=\"#\"\n onClick={event => {\n event.preventDefault()\n const { view } = model\n try {\n if (view) {\n view.navToLocString?.(locString)\n } else {\n throw new Error(\n 'No view associated with this feature detail panel anymore',\n )\n }\n } catch (e) {\n console.error(e)\n session.notify(`${e}`)\n }\n }}\n >\n (LGV)\n </Link>\n </li>\n ))}\n </ul>\n </div>\n )\n}\n\nfunction LaunchBreakpointSplitViewPanel({\n locStrings,\n model,\n feature,\n viewType,\n}: {\n locStrings: string[]\n model: VariantFeatureWidgetModel\n feature: SimpleFeatureSerialized\n viewType: ViewType\n}) {\n const session = getSession(model)\n const simpleFeature = new SimpleFeature(feature)\n return (\n <div>\n <Typography>Launch split view</Typography>\n <ul>\n {locStrings.map(locString => (\n <li key={JSON.stringify(locString)}>\n {`${feature.refName}:${feature.start} // ${locString}`}{' '}\n <Link\n href=\"#\"\n onClick={event => {\n event.preventDefault()\n session.queueDialog(handleClose => [\n BreakendMultiLevelOptionDialog,\n {\n handleClose,\n model,\n feature: simpleFeature,\n // @ts-expect-error\n viewType,\n view: model.view,\n assemblyName: model.view.displayedRegions[0].assemblyName,\n },\n ])\n }}\n >\n (top/bottom)\n </Link>{' '}\n <Link\n href=\"#\"\n onClick={event => {\n event.preventDefault()\n session.queueDialog(handleClose => [\n BreakendSingleLevelOptionDialog,\n {\n handleClose,\n model,\n feature: simpleFeature,\n // @ts-expect-error\n viewType,\n view: model.view,\n assemblyName: model.view.displayedRegions[0].assemblyName,\n },\n ])\n }}\n >\n (single row)\n </Link>\n </li>\n ))}\n </ul>\n </div>\n )\n}\n\nexport default function BreakendPanel(props: {\n locStrings: string[]\n model: VariantFeatureWidgetModel\n feature: SimpleFeatureSerialized\n}) {\n const { model, locStrings, feature } = props\n const session = getSession(model)\n const { pluginManager } = getEnv(session)\n let viewType: ViewType \| undefined\n\n try {\n viewType = pluginManager.getViewType('BreakpointSplitView')\n } catch (e) {\n // ignore\n }\n\n return (\n <BaseCard {...props} title=\"Breakends\">\n <LocStringList model={model} locStrings={locStrings} />\n {viewType ? 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rev

line source

125

49f3d3878413 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 5ea1f9c1eef1de76232e69aa6d34cda77d90d566

fubar

parents:

diff changeset

1 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React, { lazy } from 'react'\nimport { Link, Typography } from '@mui/material'\nimport {\n getEnv,\n getSession,\n SimpleFeature,\n SimpleFeatureSerialized,\n} from '@jbrowse/core/util'\nimport { BaseCard } from '@jbrowse/core/BaseFeatureWidget/BaseFeatureDetail'\nimport { ViewType } from '@jbrowse/core/pluggableElementTypes'\n\n// locals\nimport { VariantFeatureWidgetModel } from './stateModelFactory'\n\n// lazies\nconst BreakendMultiLevelOptionDialog = lazy(\n () => import('./BreakendMultiLevelOptionDialog'),\n)\nconst BreakendSingleLevelOptionDialog = lazy(\n () => import('./BreakendSingleLevelOptionDialog'),\n)\n\nfunction LocStringList({\n locStrings,\n model,\n}: {\n locStrings: string[]\n model: VariantFeatureWidgetModel\n}) {\n const session = getSession(model)\n return (\n <div>\n <Typography>Navigate to breakend endpoint in linear view:</Typography>\n <ul>\n {locStrings.map((locString, index) => (\n /* biome-ignore lint/suspicious/noArrayIndexKey: */\n <li key={`${locString}-${index}`}>\n {locString}{' '}\n <Link\n href=\"#\"\n onClick={event => {\n event.preventDefault()\n const { view } = model\n try {\n if (view) {\n view.navToLocString?.(locString)\n } else {\n throw new Error(\n 'No view associated with this feature detail panel anymore',\n )\n }\n } catch (e) {\n console.error(e)\n session.notify(`${e}`)\n }\n }}\n >\n (LGV)\n </Link>\n </li>\n ))}\n </ul>\n </div>\n )\n}\n\nfunction LaunchBreakpointSplitViewPanel({\n locStrings,\n model,\n feature,\n viewType,\n}: {\n locStrings: string[]\n model: VariantFeatureWidgetModel\n feature: SimpleFeatureSerialized\n viewType: ViewType\n}) {\n const session = getSession(model)\n const simpleFeature = new SimpleFeature(feature)\n return (\n <div>\n <Typography>Launch split view</Typography>\n <ul>\n {locStrings.map(locString => (\n <li key={JSON.stringify(locString)}>\n {`${feature.refName}:${feature.start} // ${locString}`}{' '}\n <Link\n href=\"#\"\n onClick={event => {\n event.preventDefault()\n session.queueDialog(handleClose => [\n BreakendMultiLevelOptionDialog,\n {\n handleClose,\n model,\n feature: simpleFeature,\n // @ts-expect-error\n viewType,\n view: model.view,\n assemblyName: model.view.displayedRegions[0].assemblyName,\n },\n ])\n }}\n >\n (top/bottom)\n </Link>{' '}\n <Link\n href=\"#\"\n onClick={event => {\n event.preventDefault()\n session.queueDialog(handleClose => [\n BreakendSingleLevelOptionDialog,\n {\n handleClose,\n model,\n feature: simpleFeature,\n // @ts-expect-error\n viewType,\n view: model.view,\n assemblyName: model.view.displayedRegions[0].assemblyName,\n },\n ])\n }}\n >\n (single row)\n </Link>\n </li>\n ))}\n </ul>\n </div>\n )\n}\n\nexport default function BreakendPanel(props: {\n locStrings: string[]\n model: VariantFeatureWidgetModel\n feature: SimpleFeatureSerialized\n}) {\n const { model, locStrings, feature } = props\n const session = getSession(model)\n const { pluginManager } = getEnv(session)\n let viewType: ViewType | undefined\n\n try {\n viewType = pluginManager.getViewType('BreakpointSplitView')\n } catch (e) {\n // ignore\n }\n\n return (\n <BaseCard {...props} title=\"Breakends\">\n <LocStringList model={model} locStrings={locStrings} />\n {viewType ? (\n <LaunchBreakpointSplitViewPanel\n viewType={viewType}\n model={model}\n locStrings={locStrings}\n feature={feature}\n />\n ) : null}\n </BaseCard>\n )\n}\n"],"names":["BreakendMultiLevelOptionDialog","lazy","BreakendSingleLevelOptionDialog","LocStringList","locStrings","model","session","getSession","React","Typography","map","locString","index","key","Link","href","onClick","event","preventDefault","view","Error","navToLocString","e","console","error","notify","LaunchBreakpointSplitViewPanel","feature","viewType","simpleFeature","SimpleFeature","JSON","stringify","refName","start","queueDialog","handleClose","assemblyName","displayedRegions","BreakendPanel","props","pluginManager","getEnv","getViewType","BaseCard","_extends","title"],"sourceRoot":""}

Mercurial > repos > fubar > jbrowse2

annotate x/static/js/7087.79101e8e.chunk.js.map @ 125:49f3d3878413 draft