Mercurial > repos > fubar > jbrowse2
comparison jbrowse2.xml @ 125:49f3d3878413 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 5ea1f9c1eef1de76232e69aa6d34cda77d90d566
| author | fubar |
|---|---|
| date | Sat, 05 Oct 2024 23:58:05 +0000 |
| parents | 137e08517410 |
| children | fbabf7498471 |
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| 124:137e08517410 | 125:49f3d3878413 |
|---|---|
| 1126 <has_n_elements_with_path path="./metadata/general/session_name" n="1"/> | 1126 <has_n_elements_with_path path="./metadata/general/session_name" n="1"/> |
| 1127 <element_text_is path="./metadata/general/session_name" text="New JBrowse2 session"/> | 1127 <element_text_is path="./metadata/general/session_name" text="New JBrowse2 session"/> |
| 1128 </has_archive_member> | 1128 </has_archive_member> |
| 1129 </assert_contents> | 1129 </assert_contents> |
| 1130 </output> | 1130 </output> |
| 1131 </test> | |
| 1132 <test> | |
| 1133 <repeat name="assemblies"> | |
| 1134 <conditional name="reference_genome"> | |
| 1135 <param name="genome_type_select" value="history"/> | |
| 1136 <param name="genome" value="merlin.fa"/> | |
| 1137 <param name="genome.ext" value="fasta"/> | |
| 1138 <param name="genome.name" value="Merlin"/> | |
| 1139 </conditional> | |
| 1140 <repeat name="track_groups"> | |
| 1141 <param name="category" value="Default"/> | |
| 1142 <repeat name="data_tracks"> | |
| 1143 <conditional name="data_format"> | |
| 1144 <param name="data_format_select" value="bigwig"/> | |
| 1145 <conditional name="useuri"> | |
| 1146 <param name="annotation" value="bw/m:e.r.l .i-n.bw"/> | |
| 1147 <param name="insource" value="history"/> | |
| 1148 </conditional> | |
| 1149 </conditional> | |
| 1150 </repeat> | |
| 1151 </repeat> | |
| 1152 </repeat> | |
| 1153 <section name="jbgen"> | |
| 1154 <param name="zipOut" value="true"/> | |
| 1155 </section> | |
| 1156 <output name="output"> | |
| 1157 <assert_contents> | |
| 1158 <has_archive_member path="config.json"> | |
| 1159 <has_text text="QuantitativeTrack"/> | |
| 1160 <has_text text="trackId"/> | |
| 1161 <has_text text="me.r.l.i-n.bw_0"/> | |
| 1162 <has_text text="name"/> | |
| 1163 <has_text text="Default"/> | |
| 1164 <has_text text="name"/> | |
| 1165 <has_text text="assemblyName"/> | |
| 1166 <has_text text="merlin.fa"/> | |
| 1167 </has_archive_member> | |
| 1168 </assert_contents> | |
| 1169 </output> | |
| 1131 </test> | 1170 </test> |
| 1132 </tests> | 1171 </tests> |
| 1133 <help><![CDATA[ | 1172 <help><![CDATA[ |
| 1134 | 1173 |
| 1135 JBrowse2-in-Galaxy | 1174 JBrowse2-in-Galaxy |