Mercurial > repos > fubar > jbrowse2

comparison x/galaxy.xml @ 125:49f3d3878413 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit 5ea1f9c1eef1de76232e69aa6d34cda77d90d566
author fubar
date Sat, 05 Oct 2024 23:58:05 +0000
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124:137e08517410 125:49f3d3878413
1 <?xml version="1.0"?>
2 <root>
3 <metadata>
4 <general>
5 <defaultLocation></defaultLocation>
6 <zipOut>true</zipOut>
7 <bpPerPx>50</bpPerPx>
8 <analytics>false</analytics>
9 <primary_color>#0d233f</primary_color>
10 <secondary_color>#721e63</secondary_color>
11 <tertiary_color>#135560</tertiary_color>
12 <quaternary_color>#ffb11d</quaternary_color>
13 <font_size>10</font_size>
14 <session_name>New JBrowse2 session</session_name>
15 </general>
16 <galaxyUrl>http://localhost:8080</galaxyUrl>
17 </metadata>
18 <assembly>
19 <metadata>
20 <genomes>
21 <genome path="/tmp/tmp1o397r1c/files/0/8/7/dataset_087ee618-c1bb-44f5-8154-b99f36c6c9d0.dat" label="merlin.fa" useuri="no">
22 <metadata>
23
24 <dataset id="8209a7ce5c994d06"
25 hid="1"
26 size="171.6 KB"
27 edam_format="format_1929"
28 file_ext="fasta"
29 dname = "merlin.fa"
30 />
31 <history
32 user_email="planemo@galaxyproject.org"
33 user_id="1"
34 display_name="Tool Test History for jbrowse2/2.15.4+galaxy4-0"/>
35 id="8209a7ce5c994d06"
36 />
37 <metadata
38 dbkey="?"
39 data_lines="2881"
40 sequences="1"
41 />
42 <tool
43 tool_id="upload1"
44 tool_version="1.1.7"
45 />
46 </metadata>
47 </genome>
48 </genomes>
49 </metadata>
50 <tracks>
51 <track cat="Default" format="bigwig" visibility="default_on">
52 <files>
53 <trackFile path="/tmp/tmp1o397r1c/files/6/d/0/dataset_6d084510-481a-476e-b695-007342a696de.dat" ext="bigwig" label="m:e.r.l .i-n.bw" useuri="no">
54 <metadata>
55 <dataset id="5bf1d76d98c8e935" hid="2"
56 size="81.6 KB"
57 edam_format="format_3006"
58 file_ext="bigwig" />
59 <history id="8209a7ce5c994d06"
60 user_email="planemo@galaxyproject.org"
61 user_id="1"
62 display_name="Tool Test History for jbrowse2/2.15.4+galaxy4-0"/>
63 <metadata
64 dbkey="?"
65 />
66 <tool
67 tool_id="upload1"
68 tool_version="1.1.7"
69 />
70 </metadata>
71 </trackFile>
72 </files>
73 <options>
74 <style>
75 <type>LinearWiggleDisplay</type>
76 <color>#135560</color>
77 <autoscale>globalsd</autoscale>
78 <resolution>1</resolution>
79 <summaryScoreMode>whiskers</summaryScoreMode>
80 <filled>true</filled>
81 <scaleType>linear</scaleType>
82 <displayCrossHatches>true</displayCrossHatches>
83 <minScore></minScore>
84 <maxScore></maxScore>
85 </style>
86 </options>
87 </track>
88 </tracks>
89 </assembly>
90 </root>