annotate toolfactory/install_tf_deps.sh @ 1:0183cad9d13b draft

planemo upload
author fubar
date Thu, 22 Feb 2024 10:48:01 +0000
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
1
0183cad9d13b planemo upload
fubar
parents:
diff changeset
1 LOCALTOOLDIR="/home/ross/rossgit/galaxytf231/local_tools"
0183cad9d13b planemo upload
fubar
parents:
diff changeset
2 APIK="1718977735397126400"
0183cad9d13b planemo upload
fubar
parents:
diff changeset
3 GAL="http://localhost:8080"
0183cad9d13b planemo upload
fubar
parents:
diff changeset
4 # all unless a single id is passed in as $1
0183cad9d13b planemo upload
fubar
parents:
diff changeset
5 if [ -z "$1" ]; then
0183cad9d13b planemo upload
fubar
parents:
diff changeset
6 for f in $LOCALTOOLDIR/*; do
0183cad9d13b planemo upload
fubar
parents:
diff changeset
7 if [ -d "$f" ]; then
0183cad9d13b planemo upload
fubar
parents:
diff changeset
8 TOOL=`basename "$f"`
0183cad9d13b planemo upload
fubar
parents:
diff changeset
9 install_tool_deps -v -g $GAL -a $APIK -t $LOCALTOOLDIR/$TOOL/$TOOL.xml
0183cad9d13b planemo upload
fubar
parents:
diff changeset
10 fi
0183cad9d13b planemo upload
fubar
parents:
diff changeset
11 done
0183cad9d13b planemo upload
fubar
parents:
diff changeset
12 else
0183cad9d13b planemo upload
fubar
parents:
diff changeset
13 install_tool_deps -v -g $GAL -a $APIK -t $LOCALTOOLDIR/$1/$1.xml
0183cad9d13b planemo upload
fubar
parents:
diff changeset
14 fi
0183cad9d13b planemo upload
fubar
parents:
diff changeset
15
0183cad9d13b planemo upload
fubar
parents:
diff changeset
16
0183cad9d13b planemo upload
fubar
parents:
diff changeset
17