Mercurial > repos > galaxy-australia > cactus_export

view README.rst @ 15:c44f824c051a draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/cactus commit 8fc43fe1e8c12438a14dbd174a8af3e7cb8b55dc
author iuc
date Thu, 08 Feb 2024 08:52:41 +0000
parents 2e093badc689
children
line wrap: on
line source

Cactus
======

This suite contains a wrapper for the
`Cactus <github.com/comparativeGenomicsToolkit/cactus>`__ whole-genome
aligner and another wrapper for exporting the data it generates.

Requirements
------------

Cactus uses a lot of RAM. We have tested it on Galaxy using 24 GB of RAM
for a progressive alignment of three chromosome-level, 150 megabase
genomes.