Mercurial > repos > galaxy-australia > kmc
diff kmc_tools_filter.xml @ 2:c97f8a687258 draft
planemo upload for repository https://github.com/usegalaxy-au/tools-au/tree/master/tools/kmc commit 3be367228b531c346c10700f07d57ae44394be36-dirty
| author | galaxy-australia |
|---|---|
| date | Wed, 02 Oct 2024 08:34:43 +0000 |
| parents | c7fda6e88567 |
| children |
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--- a/kmc_tools_filter.xml Tue Oct 01 04:06:26 2024 +0000 +++ b/kmc_tools_filter.xml Wed Oct 02 08:34:43 2024 +0000 @@ -72,11 +72,11 @@ <!-- #1 test with common parameters --> <param name="input_collection"> <collection type="list"> - <element name="db.kmc_suf" value="db.kmc_suf" dbkey="89"/> - <element name="db.kmc_pre" value="db.kmc_pre" dbkey="89"/> + <element name="db.kmc_pre" value="filtered_kmers1.kmc_pre" dbkey="89"/> + <element name="db.kmc_suf" value="filtered_kmers1.kmc_suf" dbkey="89"/> </collection> </param> - <param name="input_read_file" value="F3D0_R1.fastq" ftype="fastq"/> + <param name="input_read_file" value="Illumina.1.fastq" ftype="fastq"/> <param name="min_kmer_occurrence" value="3" /> <param name="exclude_length" value="2" /> <param name="exclude_kmer_occurence" value="10" /> @@ -86,11 +86,11 @@ <!-- #2 test with common parameters --> <param name="input_collection"> <collection type="list"> - <element name="db.kmc_suf" value="db.kmc_suf" dbkey="89"/> - <element name="db.kmc_pre" value="db.kmc_pre" dbkey="89"/> + <element name="db.kmc_pre" value="filtered_kmers2.kmc_pre" dbkey="89"/> + <element name="db.kmc_suf" value="filtered_kmers2.kmc_suf" dbkey="89"/> </collection> </param> - <param name="input_read_file" value="F3D0_R1.fastq" ftype="fastq"/> + <param name="input_read_file" value="Illumina.2.fastq" ftype="fastq"/> <param name="exclude_length" value="10" /> <param name="exclude_kmer_occurence" value="100" /> <output name="filtered_2.fastq" file="filtered_2.fastq" ftype="fastq" />