Mercurial > repos > galaxy-australia > purge_haplotigs

annotate test-data/curated.reassignments_w_repeats.tsv @ 0:af9c15ba501f draft default tip

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"planemo upload for repository https://github.com/usegalaxy-au/tools-au/tree/master/tools/purge_haplotigs commit 4eeb962b57af0e0d80cfefeac08b7206fdc4c60e"
author galaxy-australia
date Wed, 20 Apr 2022 06:46:59 +0000
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af9c15ba501f "planemo upload for repository https://github.com/usegalaxy-au/tools-au/tree/master/tools/purge_haplotigs commit 4eeb962b57af0e0d80cfefeac08b7206fdc4c60e"
galaxy-australia
parents:
diff changeset
1 #reassigned_contig top_hit_contig second_hit_contig best_match_coverage max_match_coverage reassignment
af9c15ba501f "planemo upload for repository https://github.com/usegalaxy-au/tools-au/tree/master/tools/purge_haplotigs commit 4eeb962b57af0e0d80cfefeac08b7206fdc4c60e"
galaxy-australia
parents:
diff changeset
2 000000F_001 000000F - 99.95 133.47 HAPLOTIG
af9c15ba501f "planemo upload for repository https://github.com/usegalaxy-au/tools-au/tree/master/tools/purge_haplotigs commit 4eeb962b57af0e0d80cfefeac08b7206fdc4c60e"
galaxy-australia
parents:
diff changeset
3 000000F_002 000000F - 96.56 102.29 HAPLOTIG
af9c15ba501f "planemo upload for repository https://github.com/usegalaxy-au/tools-au/tree/master/tools/purge_haplotigs commit 4eeb962b57af0e0d80cfefeac08b7206fdc4c60e"
galaxy-australia
parents:
diff changeset
4 000000F_003 000000F - 99.98 126.89 HAPLOTIG
af9c15ba501f "planemo upload for repository https://github.com/usegalaxy-au/tools-au/tree/master/tools/purge_haplotigs commit 4eeb962b57af0e0d80cfefeac08b7206fdc4c60e"
galaxy-australia
parents:
diff changeset
5 000000F_004 000000F - 99.97 99.97 HAPLOTIG
af9c15ba501f "planemo upload for repository https://github.com/usegalaxy-au/tools-au/tree/master/tools/purge_haplotigs commit 4eeb962b57af0e0d80cfefeac08b7206fdc4c60e"
galaxy-australia
parents:
diff changeset
6 000002F 000001F - 99.94 110.67 HAPLOTIG
af9c15ba501f "planemo upload for repository https://github.com/usegalaxy-au/tools-au/tree/master/tools/purge_haplotigs commit 4eeb962b57af0e0d80cfefeac08b7206fdc4c60e"
galaxy-australia
parents:
diff changeset
7 #contigs_kept
af9c15ba501f "planemo upload for repository https://github.com/usegalaxy-au/tools-au/tree/master/tools/purge_haplotigs commit 4eeb962b57af0e0d80cfefeac08b7206fdc4c60e"
galaxy-australia
parents:
diff changeset
8 000000F - - - - KEEP
af9c15ba501f "planemo upload for repository https://github.com/usegalaxy-au/tools-au/tree/master/tools/purge_haplotigs commit 4eeb962b57af0e0d80cfefeac08b7206fdc4c60e"
galaxy-australia
parents:
diff changeset
9 000001F - - - - KEEP
af9c15ba501f "planemo upload for repository https://github.com/usegalaxy-au/tools-au/tree/master/tools/purge_haplotigs commit 4eeb962b57af0e0d80cfefeac08b7206fdc4c60e"
galaxy-australia
parents:
diff changeset
10 000004F - - - - KEEP
af9c15ba501f "planemo upload for repository https://github.com/usegalaxy-au/tools-au/tree/master/tools/purge_haplotigs commit 4eeb962b57af0e0d80cfefeac08b7206fdc4c60e"
galaxy-australia
parents:
diff changeset
11 #junk_contigs
af9c15ba501f "planemo upload for repository https://github.com/usegalaxy-au/tools-au/tree/master/tools/purge_haplotigs commit 4eeb962b57af0e0d80cfefeac08b7206fdc4c60e"
galaxy-australia
parents:
diff changeset
12 000003F - - - - JUNK
af9c15ba501f "planemo upload for repository https://github.com/usegalaxy-au/tools-au/tree/master/tools/purge_haplotigs commit 4eeb962b57af0e0d80cfefeac08b7206fdc4c60e"
galaxy-australia
parents:
diff changeset
13 000002F_001 - - - - JUNK
af9c15ba501f "planemo upload for repository https://github.com/usegalaxy-au/tools-au/tree/master/tools/purge_haplotigs commit 4eeb962b57af0e0d80cfefeac08b7206fdc4c60e"
galaxy-australia
parents:
diff changeset
14 000001F_001 - - - - JUNK
af9c15ba501f "planemo upload for repository https://github.com/usegalaxy-au/tools-au/tree/master/tools/purge_haplotigs commit 4eeb962b57af0e0d80cfefeac08b7206fdc4c60e"
galaxy-australia
parents:
diff changeset
15 000000F_005 - - - - JUNK