Mercurial > repos > galaxy-australia > purge_haplotigs

diff test-data/curated.reassignments_w_repeats.tsv @ 0:af9c15ba501f draft default tip

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"planemo upload for repository https://github.com/usegalaxy-au/tools-au/tree/master/tools/purge_haplotigs commit 4eeb962b57af0e0d80cfefeac08b7206fdc4c60e"
author galaxy-australia
date Wed, 20 Apr 2022 06:46:59 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/curated.reassignments_w_repeats.tsv	Wed Apr 20 06:46:59 2022 +0000
@@ -0,0 +1,15 @@
+#reassigned_contig	top_hit_contig	second_hit_contig	best_match_coverage	max_match_coverage	reassignment
+000000F_001	000000F	-	99.95	133.47	HAPLOTIG
+000000F_002	000000F	-	96.56	102.29	HAPLOTIG
+000000F_003	000000F	-	99.98	126.89	HAPLOTIG
+000000F_004	000000F	-	99.97	99.97	HAPLOTIG
+000002F	000001F	-	99.94	110.67	HAPLOTIG
+#contigs_kept
+000000F	-	-	-	-	KEEP
+000001F	-	-	-	-	KEEP
+000004F	-	-	-	-	KEEP
+#junk_contigs
+000003F	-	-	-	-	JUNK
+000002F_001	-	-	-	-	JUNK
+000001F_001	-	-	-	-	JUNK
+000000F_005	-	-	-	-	JUNK