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1 <?xml version="1.0"?>
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2 <!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
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3 <BlastOutput>
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4 <BlastOutput_program>blastp</BlastOutput_program>
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5 <BlastOutput_version>BLASTP 2.2.29+</BlastOutput_version>
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6 <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference>
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7 <BlastOutput_db>/panfs/roc/rissdb/blast/current/nr</BlastOutput_db>
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8 <BlastOutput_query-ID>Query_1</BlastOutput_query-ID>
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9 <BlastOutput_query-def>gi|57163783|ref|NP_001009242.1| rhodopsin [Felis catus]</BlastOutput_query-def>
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10 <BlastOutput_query-len>348</BlastOutput_query-len>
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11 <BlastOutput_param>
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12 <Parameters>
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13 <Parameters_matrix>BLOSUM62</Parameters_matrix>
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14 <Parameters_expect>0.001</Parameters_expect>
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15 <Parameters_gap-open>11</Parameters_gap-open>
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16 <Parameters_gap-extend>1</Parameters_gap-extend>
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17 <Parameters_filter>F</Parameters_filter>
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18 </Parameters>
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19 </BlastOutput_param>
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20 <BlastOutput_iterations>
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21 <Iteration>
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22 <Iteration_iter-num>1</Iteration_iter-num>
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23 <Iteration_query-ID>Query_1</Iteration_query-ID>
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24 <Iteration_query-def>gi|57163783|ref|NP_001009242.1| rhodopsin [Felis catus]</Iteration_query-def>
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25 <Iteration_query-len>348</Iteration_query-len>
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26 <Iteration_hits>
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27 <Hit>
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28 <Hit_num>1</Hit_num>
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29 <Hit_id>gi|57163783|ref|NP_001009242.1|</Hit_id>
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30 <Hit_def>rhodopsin [Felis catus] >gi|75073790|sp|Q95KU1.1|OPSD_FELCA RecName: Full=Rhodopsin [Felis catus] >gi|16516829|emb|CAD10144.1| opsin [Felis catus]</Hit_def>
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31 <Hit_accession>NP_001009242</Hit_accession>
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32 <Hit_len>348</Hit_len>
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33 <Hit_hsps>
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34 <Hsp>
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35 <Hsp_num>1</Hsp_num>
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36 <Hsp_bit-score>717.613</Hsp_bit-score>
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37 <Hsp_score>1851</Hsp_score>
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38 <Hsp_evalue>0</Hsp_evalue>
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39 <Hsp_query-from>1</Hsp_query-from>
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40 <Hsp_query-to>348</Hsp_query-to>
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41 <Hsp_hit-from>1</Hsp_hit-from>
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42 <Hsp_hit-to>348</Hsp_hit-to>
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43 <Hsp_query-frame>0</Hsp_query-frame>
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44 <Hsp_hit-frame>0</Hsp_hit-frame>
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45 <Hsp_identity>348</Hsp_identity>
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46 <Hsp_positive>348</Hsp_positive>
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47 <Hsp_gaps>0</Hsp_gaps>
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48 <Hsp_align-len>348</Hsp_align-len>
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49 <Hsp_qseq>MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA</Hsp_qseq>
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50 <Hsp_hseq>MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA</Hsp_hseq>
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51 <Hsp_midline>MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA</Hsp_midline>
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52 </Hsp>
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53 </Hit_hsps>
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54 </Hit>
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55 <Hit>
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56 <Hit_num>2</Hit_num>
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57 <Hit_id>gi|591296700|ref|XP_007075496.1|</Hit_id>
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58 <Hit_def>PREDICTED: rhodopsin [Panthera tigris altaica]</Hit_def>
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59 <Hit_accession>XP_007075496</Hit_accession>
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60 <Hit_len>348</Hit_len>
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61 <Hit_hsps>
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62 <Hsp>
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63 <Hsp_num>1</Hsp_num>
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64 <Hsp_bit-score>714.146</Hsp_bit-score>
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65 <Hsp_score>1842</Hsp_score>
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66 <Hsp_evalue>0</Hsp_evalue>
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67 <Hsp_query-from>1</Hsp_query-from>
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68 <Hsp_query-to>348</Hsp_query-to>
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69 <Hsp_hit-from>1</Hsp_hit-from>
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70 <Hsp_hit-to>348</Hsp_hit-to>
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71 <Hsp_query-frame>0</Hsp_query-frame>
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72 <Hsp_hit-frame>0</Hsp_hit-frame>
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73 <Hsp_identity>346</Hsp_identity>
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74 <Hsp_positive>347</Hsp_positive>
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75 <Hsp_gaps>0</Hsp_gaps>
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76 <Hsp_align-len>348</Hsp_align-len>
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77 <Hsp_qseq>MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA</Hsp_qseq>
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78 <Hsp_hseq>MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTASKTETSQVAPA</Hsp_hseq>
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79 <Hsp_midline>MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVA+LFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTT SKTETSQVAPA</Hsp_midline>
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80 </Hsp>
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81 </Hit_hsps>
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82 </Hit>
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83 </Iteration_hits>
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84 <Iteration_stat>
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85 <Statistics>
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86 <Statistics_db-num>49886901</Statistics_db-num>
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87 <Statistics_db-len>17905752166</Statistics_db-len>
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88 <Statistics_hsp-len>149</Statistics_hsp-len>
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89 <Statistics_eff-space>2084048179483</Statistics_eff-space>
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90 <Statistics_kappa>0.041</Statistics_kappa>
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91 <Statistics_lambda>0.267</Statistics_lambda>
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92 <Statistics_entropy>0.14</Statistics_entropy>
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93 </Statistics>
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94 </Iteration_stat>
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95 </Iteration>
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96 <Iteration>
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97 <Iteration_iter-num>2</Iteration_iter-num>
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98 <Iteration_query-ID>Query_2</Iteration_query-ID>
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99 <Iteration_query-def>gi|3024260|sp|P56514.1|OPSD_BUFBU RecName: Full=Rhodopsin</Iteration_query-def>
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100 <Iteration_query-len>354</Iteration_query-len>
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101 <Iteration_hits>
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102 <Hit>
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103 <Hit_num>1</Hit_num>
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104 <Hit_id>gi|3024260|sp|P56514.1|OPSD_BUFBU</Hit_id>
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105 <Hit_def>RecName: Full=Rhodopsin >gi|2734706|gb|AAB93704.1| rhodopsin [Bufo bufo]</Hit_def>
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106 <Hit_accession>P56514</Hit_accession>
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107 <Hit_len>354</Hit_len>
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108 <Hit_hsps>
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109 <Hsp>
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110 <Hsp_num>1</Hsp_num>
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111 <Hsp_bit-score>729.169</Hsp_bit-score>
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112 <Hsp_score>1881</Hsp_score>
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113 <Hsp_evalue>0</Hsp_evalue>
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114 <Hsp_query-from>1</Hsp_query-from>
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115 <Hsp_query-to>354</Hsp_query-to>
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116 <Hsp_hit-from>1</Hsp_hit-from>
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117 <Hsp_hit-to>354</Hsp_hit-to>
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118 <Hsp_query-frame>0</Hsp_query-frame>
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119 <Hsp_hit-frame>0</Hsp_hit-frame>
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120 <Hsp_identity>354</Hsp_identity>
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121 <Hsp_positive>354</Hsp_positive>
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122 <Hsp_gaps>0</Hsp_gaps>
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123 <Hsp_align-len>354</Hsp_align-len>
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124 <Hsp_qseq>MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIIIFFCYGRLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQGSEFGPIFMTVPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGEDDASSAATSKTEASSVSSSQVSPA</Hsp_qseq>
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125 <Hsp_hseq>MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIIIFFCYGRLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQGSEFGPIFMTVPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGEDDASSAATSKTEASSVSSSQVSPA</Hsp_hseq>
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126 <Hsp_midline>MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIIIFFCYGRLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQGSEFGPIFMTVPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGEDDASSAATSKTEASSVSSSQVSPA</Hsp_midline>
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127 </Hsp>
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128 </Hit_hsps>
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129 </Hit>
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130 <Hit>
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131 <Hit_num>2</Hit_num>
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132 <Hit_id>gi|3024261|sp|P56515.1|OPSD_BUFMA</Hit_id>
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133 <Hit_def>RecName: Full=Rhodopsin >gi|2734708|gb|AAB93705.1| rhodopsin [Rhinella marina]</Hit_def>
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134 <Hit_accession>P56515</Hit_accession>
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135 <Hit_len>354</Hit_len>
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136 <Hit_hsps>
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137 <Hsp>
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138 <Hsp_num>1</Hsp_num>
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139 <Hsp_bit-score>691.419</Hsp_bit-score>
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140 <Hsp_score>1783</Hsp_score>
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141 <Hsp_evalue>0</Hsp_evalue>
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142 <Hsp_query-from>1</Hsp_query-from>
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143 <Hsp_query-to>354</Hsp_query-to>
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144 <Hsp_hit-from>1</Hsp_hit-from>
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145 <Hsp_hit-to>354</Hsp_hit-to>
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146 <Hsp_query-frame>0</Hsp_query-frame>
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147 <Hsp_hit-frame>0</Hsp_hit-frame>
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148 <Hsp_identity>339</Hsp_identity>
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149 <Hsp_positive>349</Hsp_positive>
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150 <Hsp_gaps>0</Hsp_gaps>
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151 <Hsp_align-len>354</Hsp_align-len>
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152 <Hsp_qseq>MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIIIFFCYGRLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQGSEFGPIFMTVPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGEDDASSAATSKTEASSVSSSQVSPA</Hsp_qseq>
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153 <Hsp_hseq>MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSVLCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFVFGQTGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAIMGVAFTWIMALACAAPPLFGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFLIPLIIIFFCYGRLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIFTHQGSEFGPVFMTIPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGDEDASSAATSKTEASSVSSSQVSPA</Hsp_hseq>
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154 <Hsp_midline>MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYS+LCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYF+ G TGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHA+MGVAFTWIMAL+CA PPL GWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHF IPLIIIFFCYGRLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIF++QGSEFGP+FMT+PAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFG++DASSAATSKTEASSVSSSQVSPA</Hsp_midline>
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155 </Hsp>
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156 </Hit_hsps>
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157 </Hit>
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158 </Iteration_hits>
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159 <Iteration_stat>
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160 <Statistics>
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161 <Statistics_db-num>49886901</Statistics_db-num>
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162 <Statistics_db-len>17905752166</Statistics_db-len>
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163 <Statistics_hsp-len>149</Statistics_hsp-len>
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164 <Statistics_eff-space>2146883802985</Statistics_eff-space>
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165 <Statistics_kappa>0.041</Statistics_kappa>
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166 <Statistics_lambda>0.267</Statistics_lambda>
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167 <Statistics_entropy>0.14</Statistics_entropy>
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168 </Statistics>
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169 </Iteration_stat>
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170 </Iteration>
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171 <Iteration>
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172 <Iteration_iter-num>3</Iteration_iter-num>
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173 <Iteration_query-ID>Query_3</Iteration_query-ID>
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174 <Iteration_query-def>gibberish</Iteration_query-def>
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175 <Iteration_query-len>75</Iteration_query-len>
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176 <Iteration_hits>
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177 </Iteration_hits>
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178 <Iteration_stat>
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179 <Statistics>
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180 <Statistics_db-num>49886901</Statistics_db-num>
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181 <Statistics_db-len>17905752166</Statistics_db-len>
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182 <Statistics_hsp-len>46</Statistics_hsp-len>
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183 <Statistics_eff-space>452717686880</Statistics_eff-space>
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184 <Statistics_kappa>0.041</Statistics_kappa>
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185 <Statistics_lambda>0.267</Statistics_lambda>
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186 <Statistics_entropy>0.14</Statistics_entropy>
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187 </Statistics>
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188 </Iteration_stat>
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189 <Iteration_message>lcl|Query_3 gibberish: lcl|Query_3 gibberish: Warning: One or more U or O characters replaced by X for alignment score calculations at positions 46 No hits found</Iteration_message>
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190 </Iteration>
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191 <Iteration>
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192 <Iteration_iter-num>4</Iteration_iter-num>
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193 <Iteration_query-ID>Query_4</Iteration_query-ID>
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194 <Iteration_query-def>gi|283855846|gb|ADB45242.1| rhodopsin [Cynopterus brachyotis]</Iteration_query-def>
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195 <Iteration_query-len>328</Iteration_query-len>
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196 <Iteration_hits>
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197 <Hit>
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198 <Hit_num>1</Hit_num>
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199 <Hit_id>gi|283855846|gb|ADB45242.1|</Hit_id>
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200 <Hit_def>rhodopsin [Cynopterus brachyotis]</Hit_def>
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201 <Hit_accession>ADB45242</Hit_accession>
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202 <Hit_len>328</Hit_len>
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203 <Hit_hsps>
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204 <Hsp>
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205 <Hsp_num>1</Hsp_num>
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206 <Hsp_bit-score>677.552</Hsp_bit-score>
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207 <Hsp_score>1747</Hsp_score>
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208 <Hsp_evalue>0</Hsp_evalue>
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209 <Hsp_query-from>1</Hsp_query-from>
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210 <Hsp_query-to>328</Hsp_query-to>
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211 <Hsp_hit-from>1</Hsp_hit-from>
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212 <Hsp_hit-to>328</Hsp_hit-to>
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213 <Hsp_query-frame>0</Hsp_query-frame>
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214 <Hsp_hit-frame>0</Hsp_hit-frame>
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215 <Hsp_identity>328</Hsp_identity>
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|
|
216 <Hsp_positive>328</Hsp_positive>
|
|
|
217 <Hsp_gaps>0</Hsp_gaps>
|
|
|
218 <Hsp_align-len>328</Hsp_align-len>
|
|
|
219 <Hsp_qseq>VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_qseq>
|
|
|
220 <Hsp_hseq>VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_hseq>
|
|
|
221 <Hsp_midline>VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_midline>
|
|
|
222 </Hsp>
|
|
|
223 </Hit_hsps>
|
|
|
224 </Hit>
|
|
|
225 <Hit>
|
|
|
226 <Hit_num>2</Hit_num>
|
|
|
227 <Hit_id>gi|283855848|gb|ADB45243.1|</Hit_id>
|
|
|
228 <Hit_def>rhodopsin [Dobsonia viridis]</Hit_def>
|
|
|
229 <Hit_accession>ADB45243</Hit_accession>
|
|
|
230 <Hit_len>328</Hit_len>
|
|
|
231 <Hit_hsps>
|
|
|
232 <Hsp>
|
|
|
233 <Hsp_num>1</Hsp_num>
|
|
|
234 <Hsp_bit-score>674.47</Hsp_bit-score>
|
|
|
235 <Hsp_score>1739</Hsp_score>
|
|
|
236 <Hsp_evalue>0</Hsp_evalue>
|
|
|
237 <Hsp_query-from>1</Hsp_query-from>
|
|
|
238 <Hsp_query-to>328</Hsp_query-to>
|
|
|
239 <Hsp_hit-from>1</Hsp_hit-from>
|
|
|
240 <Hsp_hit-to>328</Hsp_hit-to>
|
|
|
241 <Hsp_query-frame>0</Hsp_query-frame>
|
|
|
242 <Hsp_hit-frame>0</Hsp_hit-frame>
|
|
|
243 <Hsp_identity>326</Hsp_identity>
|
|
|
244 <Hsp_positive>328</Hsp_positive>
|
|
|
245 <Hsp_gaps>0</Hsp_gaps>
|
|
|
246 <Hsp_align-len>328</Hsp_align-len>
|
|
|
247 <Hsp_qseq>VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_qseq>
|
|
|
248 <Hsp_hseq>VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKTSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGEDEASTTAS</Hsp_hseq>
|
|
|
249 <Hsp_midline>VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAK+SSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLG+DEASTTAS</Hsp_midline>
|
|
|
250 </Hsp>
|
|
|
251 </Hit_hsps>
|
|
|
252 </Hit>
|
|
|
253 </Iteration_hits>
|
|
|
254 <Iteration_stat>
|
|
|
255 <Statistics>
|
|
|
256 <Statistics_db-num>49886901</Statistics_db-num>
|
|
|
257 <Statistics_db-len>17905752166</Statistics_db-len>
|
|
|
258 <Statistics_hsp-len>148</Statistics_hsp-len>
|
|
|
259 <Statistics_eff-space>1894048347240</Statistics_eff-space>
|
|
|
260 <Statistics_kappa>0.041</Statistics_kappa>
|
|
|
261 <Statistics_lambda>0.267</Statistics_lambda>
|
|
|
262 <Statistics_entropy>0.14</Statistics_entropy>
|
|
|
263 </Statistics>
|
|
|
264 </Iteration_stat>
|
|
|
265 </Iteration>
|
|
|
266 <Iteration>
|
|
|
267 <Iteration_iter-num>5</Iteration_iter-num>
|
|
|
268 <Iteration_query-ID>Query_5</Iteration_query-ID>
|
|
|
269 <Iteration_query-def>gi|283855823|gb|ADB45229.1| rhodopsin [Myotis pilosus]</Iteration_query-def>
|
|
|
270 <Iteration_query-len>328</Iteration_query-len>
|
|
|
271 <Iteration_hits>
|
|
|
272 <Hit>
|
|
|
273 <Hit_num>1</Hit_num>
|
|
|
274 <Hit_id>gi|283855823|gb|ADB45229.1|</Hit_id>
|
|
|
275 <Hit_def>rhodopsin [Myotis ricketti]</Hit_def>
|
|
|
276 <Hit_accession>ADB45229</Hit_accession>
|
|
|
277 <Hit_len>328</Hit_len>
|
|
|
278 <Hit_hsps>
|
|
|
279 <Hsp>
|
|
|
280 <Hsp_num>1</Hsp_num>
|
|
|
281 <Hsp_bit-score>676.781</Hsp_bit-score>
|
|
|
282 <Hsp_score>1745</Hsp_score>
|
|
|
283 <Hsp_evalue>0</Hsp_evalue>
|
|
|
284 <Hsp_query-from>1</Hsp_query-from>
|
|
|
285 <Hsp_query-to>328</Hsp_query-to>
|
|
|
286 <Hsp_hit-from>1</Hsp_hit-from>
|
|
|
287 <Hsp_hit-to>328</Hsp_hit-to>
|
|
|
288 <Hsp_query-frame>0</Hsp_query-frame>
|
|
|
289 <Hsp_hit-frame>0</Hsp_hit-frame>
|
|
|
290 <Hsp_identity>328</Hsp_identity>
|
|
|
291 <Hsp_positive>328</Hsp_positive>
|
|
|
292 <Hsp_gaps>0</Hsp_gaps>
|
|
|
293 <Hsp_align-len>328</Hsp_align-len>
|
|
|
294 <Hsp_qseq>VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_qseq>
|
|
|
295 <Hsp_hseq>VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_hseq>
|
|
|
296 <Hsp_midline>VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_midline>
|
|
|
297 </Hsp>
|
|
|
298 </Hit_hsps>
|
|
|
299 </Hit>
|
|
|
300 <Hit>
|
|
|
301 <Hit_num>2</Hit_num>
|
|
|
302 <Hit_id>gi|584076339|ref|XP_006758363.1|</Hit_id>
|
|
|
303 <Hit_def>PREDICTED: rhodopsin [Myotis davidii] >gi|432110912|gb|ELK34386.1| Rhodopsin [Myotis davidii]</Hit_def>
|
|
|
304 <Hit_accession>XP_006758363</Hit_accession>
|
|
|
305 <Hit_len>348</Hit_len>
|
|
|
306 <Hit_hsps>
|
|
|
307 <Hsp>
|
|
|
308 <Hsp_num>1</Hsp_num>
|
|
|
309 <Hsp_bit-score>676.396</Hsp_bit-score>
|
|
|
310 <Hsp_score>1744</Hsp_score>
|
|
|
311 <Hsp_evalue>0</Hsp_evalue>
|
|
|
312 <Hsp_query-from>1</Hsp_query-from>
|
|
|
313 <Hsp_query-to>328</Hsp_query-to>
|
|
|
314 <Hsp_hit-from>11</Hsp_hit-from>
|
|
|
315 <Hsp_hit-to>338</Hsp_hit-to>
|
|
|
316 <Hsp_query-frame>0</Hsp_query-frame>
|
|
|
317 <Hsp_hit-frame>0</Hsp_hit-frame>
|
|
|
318 <Hsp_identity>328</Hsp_identity>
|
|
|
319 <Hsp_positive>328</Hsp_positive>
|
|
|
320 <Hsp_gaps>0</Hsp_gaps>
|
|
|
321 <Hsp_align-len>328</Hsp_align-len>
|
|
|
322 <Hsp_qseq>VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_qseq>
|
|
|
323 <Hsp_hseq>VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_hseq>
|
|
|
324 <Hsp_midline>VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_midline>
|
|
|
325 </Hsp>
|
|
|
326 </Hit_hsps>
|
|
|
327 </Hit>
|
|
|
328 </Iteration_hits>
|
|
|
329 <Iteration_stat>
|
|
|
330 <Statistics>
|
|
|
331 <Statistics_db-num>49886901</Statistics_db-num>
|
|
|
332 <Statistics_db-len>17905752166</Statistics_db-len>
|
|
|
333 <Statistics_hsp-len>148</Statistics_hsp-len>
|
|
|
334 <Statistics_eff-space>1894048347240</Statistics_eff-space>
|
|
|
335 <Statistics_kappa>0.041</Statistics_kappa>
|
|
|
336 <Statistics_lambda>0.267</Statistics_lambda>
|
|
|
337 <Statistics_entropy>0.14</Statistics_entropy>
|
|
|
338 </Statistics>
|
|
|
339 </Iteration_stat>
|
|
|
340 </Iteration>
|
|
|
341 <Iteration>
|
|
|
342 <Iteration_iter-num>6</Iteration_iter-num>
|
|
|
343 <Iteration_query-ID>Query_6</Iteration_query-ID>
|
|
|
344 <Iteration_query-def>gi|223523|prf||0811197A rhodopsin [Bos taurus]</Iteration_query-def>
|
|
|
345 <Iteration_query-len>347</Iteration_query-len>
|
|
|
346 <Iteration_hits>
|
|
|
347 <Hit>
|
|
|
348 <Hit_num>1</Hit_num>
|
|
|
349 <Hit_id>gi|223523|prf||0811197A</Hit_id>
|
|
|
350 <Hit_def>rhodopsin</Hit_def>
|
|
|
351 <Hit_accession>0811197A</Hit_accession>
|
|
|
352 <Hit_len>347</Hit_len>
|
|
|
353 <Hit_hsps>
|
|
|
354 <Hsp>
|
|
|
355 <Hsp_num>1</Hsp_num>
|
|
|
356 <Hsp_bit-score>717.227</Hsp_bit-score>
|
|
|
357 <Hsp_score>1850</Hsp_score>
|
|
|
358 <Hsp_evalue>0</Hsp_evalue>
|
|
|
359 <Hsp_query-from>1</Hsp_query-from>
|
|
|
360 <Hsp_query-to>347</Hsp_query-to>
|
|
|
361 <Hsp_hit-from>1</Hsp_hit-from>
|
|
|
362 <Hsp_hit-to>347</Hsp_hit-to>
|
|
|
363 <Hsp_query-frame>0</Hsp_query-frame>
|
|
|
364 <Hsp_hit-frame>0</Hsp_hit-frame>
|
|
|
365 <Hsp_identity>347</Hsp_identity>
|
|
|
366 <Hsp_positive>347</Hsp_positive>
|
|
|
367 <Hsp_gaps>0</Hsp_gaps>
|
|
|
368 <Hsp_align-len>347</Hsp_align-len>
|
|
|
369 <Hsp_qseq>MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA</Hsp_qseq>
|
|
|
370 <Hsp_hseq>MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA</Hsp_hseq>
|
|
|
371 <Hsp_midline>MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA</Hsp_midline>
|
|
|
372 </Hsp>
|
|
|
373 </Hit_hsps>
|
|
|
374 </Hit>
|
|
|
375 <Hit>
|
|
|
376 <Hit_num>2</Hit_num>
|
|
|
377 <Hit_id>gi|62460472|ref|NP_001014890.1|</Hit_id>
|
|
|
378 <Hit_def>rhodopsin [Bos taurus] >gi|129204|sp|P02699.1|OPSD_BOVIN RecName: Full=Rhodopsin [Bos taurus] >gi|16975387|pdb|1JFP|A Chain A, Structure Of Bovine Rhodopsin (Dark Adapted) >gi|22219255|pdb|1LN6|A Chain A, Structure Of Bovine Rhodopsin (Metarhodopsin Ii) >gi|192988480|pdb|3CAP|A Chain A, Crystal Structure Of Native Opsin: The G Protein-Coupled Receptor Rhodopsin In Its Ligand-Free State >gi|192988481|pdb|3CAP|B Chain B, Crystal Structure Of Native Opsin: The G Protein-Coupled Receptor Rhodopsin In Its Ligand-Free State >gi|195927457|pdb|3C9L|A Chain A, Structure Of Ground-State Bovine Rhodospin In A Hexagonal Crystal Form >gi|197107530|pdb|1F88|A Chain A, Crystal Structure Of Bovine Rhodopsin >gi|197107531|pdb|1F88|B Chain B, Crystal Structure Of Bovine Rhodopsin >gi|206582030|pdb|3DQB|A Chain A, Crystal Structure Of The Active G-protein-coupled Receptor Opsin In Complex With A C-terminal Peptide Derived From The Galpha Subunit Of Transducin >gi|325533987|pdb|3PQR|A Chain A, Crystal Structure Of Metarhodopsin Ii In Complex With A C-Terminal Peptide Derived From The Galpha Subunit Of Transducin >gi|325534012|pdb|3PXO|A Chain A, Crystal Structure Of Metarhodopsin Ii >gi|554793513|pdb|4J4Q|A Chain A, Crystal Structure Of Active Conformation Of Gpcr Opsin Stabilized By Octylglucoside >gi|685425707|pdb|4PXF|A Chain A, Crystal Structure Of The Active G-protein-coupled Receptor Opsin In Complex With The Finger-loop Peptide Derived From The Full-length Arrestin-1 >gi|163443|gb|AAA30674.1| rhodopsin [Bos taurus] >gi|18148871|dbj|BAB83621.1| rhodopsin [synthetic construct] >gi|296474712|tpg|DAA16827.1| TPA: rhodopsin [Bos taurus] >gi|223563|prf||0901188A rhodopsin >gi|223567|prf||0901212A rhodopsin >gi|223818|prf||1001148A rhodopsin</Hit_def>
|
|
|
379 <Hit_accession>NP_001014890</Hit_accession>
|
|
|
380 <Hit_len>348</Hit_len>
|
|
|
381 <Hit_hsps>
|
|
|
382 <Hsp>
|
|
|
383 <Hsp_num>1</Hsp_num>
|
|
|
384 <Hsp_bit-score>712.22</Hsp_bit-score>
|
|
|
385 <Hsp_score>1837</Hsp_score>
|
|
|
386 <Hsp_evalue>0</Hsp_evalue>
|
|
|
387 <Hsp_query-from>1</Hsp_query-from>
|
|
|
388 <Hsp_query-to>347</Hsp_query-to>
|
|
|
389 <Hsp_hit-from>1</Hsp_hit-from>
|
|
|
390 <Hsp_hit-to>348</Hsp_hit-to>
|
|
|
391 <Hsp_query-frame>0</Hsp_query-frame>
|
|
|
392 <Hsp_hit-frame>0</Hsp_hit-frame>
|
|
|
393 <Hsp_identity>347</Hsp_identity>
|
|
|
394 <Hsp_positive>347</Hsp_positive>
|
|
|
395 <Hsp_gaps>1</Hsp_gaps>
|
|
|
396 <Hsp_align-len>348</Hsp_align-len>
|
|
|
397 <Hsp_qseq>MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGID-YTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA</Hsp_qseq>
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398 <Hsp_hseq>MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA</Hsp_hseq>
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399 <Hsp_midline>MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGID YTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA</Hsp_midline>
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400 </Hsp>
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|
401 </Hit_hsps>
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402 </Hit>
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|
403 </Iteration_hits>
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404 <Iteration_stat>
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|
|
405 <Statistics>
|
|
|
406 <Statistics_db-num>49886901</Statistics_db-num>
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|
|
407 <Statistics_db-len>17905752166</Statistics_db-len>
|
|
|
408 <Statistics_hsp-len>149</Statistics_hsp-len>
|
|
|
409 <Statistics_eff-space>2073575575566</Statistics_eff-space>
|
|
|
410 <Statistics_kappa>0.041</Statistics_kappa>
|
|
|
411 <Statistics_lambda>0.267</Statistics_lambda>
|
|
|
412 <Statistics_entropy>0.14</Statistics_entropy>
|
|
|
413 </Statistics>
|
|
|
414 </Iteration_stat>
|
|
|
415 </Iteration>
|
|
|
416 <Iteration>
|
|
|
417 <Iteration_iter-num>7</Iteration_iter-num>
|
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|
418 <Iteration_query-ID>Query_7</Iteration_query-ID>
|
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|
419 <Iteration_query-def>gi|12583665|dbj|BAB21486.1| fresh water form rod opsin [Conger myriaster]</Iteration_query-def>
|
|
|
420 <Iteration_query-len>354</Iteration_query-len>
|
|
|
421 <Iteration_hits>
|
|
|
422 <Hit>
|
|
|
423 <Hit_num>1</Hit_num>
|
|
|
424 <Hit_id>gi|12583665|dbj|BAB21486.1|</Hit_id>
|
|
|
425 <Hit_def>fresh water form rod opsin [Conger myriaster]</Hit_def>
|
|
|
426 <Hit_accession>BAB21486</Hit_accession>
|
|
|
427 <Hit_len>354</Hit_len>
|
|
|
428 <Hit_hsps>
|
|
|
429 <Hsp>
|
|
|
430 <Hsp_num>1</Hsp_num>
|
|
|
431 <Hsp_bit-score>731.095</Hsp_bit-score>
|
|
|
432 <Hsp_score>1886</Hsp_score>
|
|
|
433 <Hsp_evalue>0</Hsp_evalue>
|
|
|
434 <Hsp_query-from>1</Hsp_query-from>
|
|
|
435 <Hsp_query-to>354</Hsp_query-to>
|
|
|
436 <Hsp_hit-from>1</Hsp_hit-from>
|
|
|
437 <Hsp_hit-to>354</Hsp_hit-to>
|
|
|
438 <Hsp_query-frame>0</Hsp_query-frame>
|
|
|
439 <Hsp_hit-frame>0</Hsp_hit-frame>
|
|
|
440 <Hsp_identity>354</Hsp_identity>
|
|
|
441 <Hsp_positive>354</Hsp_positive>
|
|
|
442 <Hsp_gaps>0</Hsp_gaps>
|
|
|
443 <Hsp_align-len>354</Hsp_align-len>
|
|
|
444 <Hsp_qseq>MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEEDGASATSSKTEASSVSSSSVSPA</Hsp_qseq>
|
|
|
445 <Hsp_hseq>MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEEDGASATSSKTEASSVSSSSVSPA</Hsp_hseq>
|
|
|
446 <Hsp_midline>MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEEDGASATSSKTEASSVSSSSVSPA</Hsp_midline>
|
|
|
447 </Hsp>
|
|
|
448 </Hit_hsps>
|
|
|
449 </Hit>
|
|
|
450 <Hit>
|
|
|
451 <Hit_num>2</Hit_num>
|
|
|
452 <Hit_id>gi|5931796|emb|CAB56646.1|</Hit_id>
|
|
|
453 <Hit_def>rod opsin [Anguilla japonica]</Hit_def>
|
|
|
454 <Hit_accession>CAB56646</Hit_accession>
|
|
|
455 <Hit_len>352</Hit_len>
|
|
|
456 <Hit_hsps>
|
|
|
457 <Hsp>
|
|
|
458 <Hsp_num>1</Hsp_num>
|
|
|
459 <Hsp_bit-score>663.685</Hsp_bit-score>
|
|
|
460 <Hsp_score>1711</Hsp_score>
|
|
|
461 <Hsp_evalue>0</Hsp_evalue>
|
|
|
462 <Hsp_query-from>1</Hsp_query-from>
|
|
|
463 <Hsp_query-to>343</Hsp_query-to>
|
|
|
464 <Hsp_hit-from>1</Hsp_hit-from>
|
|
|
465 <Hsp_hit-to>343</Hsp_hit-to>
|
|
|
466 <Hsp_query-frame>0</Hsp_query-frame>
|
|
|
467 <Hsp_hit-frame>0</Hsp_hit-frame>
|
|
|
468 <Hsp_identity>315</Hsp_identity>
|
|
|
469 <Hsp_positive>331</Hsp_positive>
|
|
|
470 <Hsp_gaps>0</Hsp_gaps>
|
|
|
471 <Hsp_align-len>343</Hsp_align-len>
|
|
|
472 <Hsp_qseq>MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEEDGASATSSKTEA</Hsp_qseq>
|
|
|
473 <Hsp_hseq>MNGTEGPNFYVPMSNATGVVRSPFEYPQYYLAEPWAYSALAAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWVVVCKPMSNFRFGENHAIMGVAFTWLMALACAAPPLFGWSRYIPEGMQCSCGIDYYTPNPETYNESFVIYMFVCHFTIPLTVVSFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSSFGPIFMTIPAFFAKSSALYNPLIYICMNKQFRNCMITTLCCGKNPFEEEEGASTTASKTEA</Hsp_hseq>
|
|
|
474 <Hsp_midline>MNGTEGPNFY+PMSNATGVVRSPFEYPQYYLAEPWA+SAL+AYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERW+VVCKP++NFRFGE+HAIMGV TW MALACA PPLFGWSRYIPEG+QCSCGIDYYT P NESFVIYMF CHF+IPL V+SFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGS+FGPIFMTIP+FFAKSSALYNP+IYICMNKQFR+CMITTLCCGKNPFEEE+GAS T+SKTEA</Hsp_midline>
|
|
|
475 </Hsp>
|
|
|
476 </Hit_hsps>
|
|
|
477 </Hit>
|
|
|
478 </Iteration_hits>
|
|
|
479 <Iteration_stat>
|
|
|
480 <Statistics>
|
|
|
481 <Statistics_db-num>49886901</Statistics_db-num>
|
|
|
482 <Statistics_db-len>17905752166</Statistics_db-len>
|
|
|
483 <Statistics_hsp-len>149</Statistics_hsp-len>
|
|
|
484 <Statistics_eff-space>2146883802985</Statistics_eff-space>
|
|
|
485 <Statistics_kappa>0.041</Statistics_kappa>
|
|
|
486 <Statistics_lambda>0.267</Statistics_lambda>
|
|
|
487 <Statistics_entropy>0.14</Statistics_entropy>
|
|
|
488 </Statistics>
|
|
|
489 </Iteration_stat>
|
|
|
490 </Iteration>
|
|
|
491 </BlastOutput_iterations>
|
|
|
492 </BlastOutput>
|
|
|
493
|
