Mercurial > repos > galaxyp > blastxml_to_tabular_selectable
comparison test-data/blastp_rhodopsin_gibberish.xml @ 0:2bd0cbccb3c6
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author | galaxyp |
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date | Wed, 08 Oct 2014 19:38:28 -0400 |
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1 <?xml version="1.0"?> | |
2 <!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd"> | |
3 <BlastOutput> | |
4 <BlastOutput_program>blastp</BlastOutput_program> | |
5 <BlastOutput_version>BLASTP 2.2.29+</BlastOutput_version> | |
6 <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference> | |
7 <BlastOutput_db>/panfs/roc/rissdb/blast/current/nr</BlastOutput_db> | |
8 <BlastOutput_query-ID>Query_1</BlastOutput_query-ID> | |
9 <BlastOutput_query-def>gi|57163783|ref|NP_001009242.1| rhodopsin [Felis catus]</BlastOutput_query-def> | |
10 <BlastOutput_query-len>348</BlastOutput_query-len> | |
11 <BlastOutput_param> | |
12 <Parameters> | |
13 <Parameters_matrix>BLOSUM62</Parameters_matrix> | |
14 <Parameters_expect>0.001</Parameters_expect> | |
15 <Parameters_gap-open>11</Parameters_gap-open> | |
16 <Parameters_gap-extend>1</Parameters_gap-extend> | |
17 <Parameters_filter>F</Parameters_filter> | |
18 </Parameters> | |
19 </BlastOutput_param> | |
20 <BlastOutput_iterations> | |
21 <Iteration> | |
22 <Iteration_iter-num>1</Iteration_iter-num> | |
23 <Iteration_query-ID>Query_1</Iteration_query-ID> | |
24 <Iteration_query-def>gi|57163783|ref|NP_001009242.1| rhodopsin [Felis catus]</Iteration_query-def> | |
25 <Iteration_query-len>348</Iteration_query-len> | |
26 <Iteration_hits> | |
27 <Hit> | |
28 <Hit_num>1</Hit_num> | |
29 <Hit_id>gi|57163783|ref|NP_001009242.1|</Hit_id> | |
30 <Hit_def>rhodopsin [Felis catus] >gi|75073790|sp|Q95KU1.1|OPSD_FELCA RecName: Full=Rhodopsin [Felis catus] >gi|16516829|emb|CAD10144.1| opsin [Felis catus]</Hit_def> | |
31 <Hit_accession>NP_001009242</Hit_accession> | |
32 <Hit_len>348</Hit_len> | |
33 <Hit_hsps> | |
34 <Hsp> | |
35 <Hsp_num>1</Hsp_num> | |
36 <Hsp_bit-score>717.613</Hsp_bit-score> | |
37 <Hsp_score>1851</Hsp_score> | |
38 <Hsp_evalue>0</Hsp_evalue> | |
39 <Hsp_query-from>1</Hsp_query-from> | |
40 <Hsp_query-to>348</Hsp_query-to> | |
41 <Hsp_hit-from>1</Hsp_hit-from> | |
42 <Hsp_hit-to>348</Hsp_hit-to> | |
43 <Hsp_query-frame>0</Hsp_query-frame> | |
44 <Hsp_hit-frame>0</Hsp_hit-frame> | |
45 <Hsp_identity>348</Hsp_identity> | |
46 <Hsp_positive>348</Hsp_positive> | |
47 <Hsp_gaps>0</Hsp_gaps> | |
48 <Hsp_align-len>348</Hsp_align-len> | |
49 <Hsp_qseq>MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA</Hsp_qseq> | |
50 <Hsp_hseq>MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA</Hsp_hseq> | |
51 <Hsp_midline>MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA</Hsp_midline> | |
52 </Hsp> | |
53 </Hit_hsps> | |
54 </Hit> | |
55 <Hit> | |
56 <Hit_num>2</Hit_num> | |
57 <Hit_id>gi|591296700|ref|XP_007075496.1|</Hit_id> | |
58 <Hit_def>PREDICTED: rhodopsin [Panthera tigris altaica]</Hit_def> | |
59 <Hit_accession>XP_007075496</Hit_accession> | |
60 <Hit_len>348</Hit_len> | |
61 <Hit_hsps> | |
62 <Hsp> | |
63 <Hsp_num>1</Hsp_num> | |
64 <Hsp_bit-score>714.146</Hsp_bit-score> | |
65 <Hsp_score>1842</Hsp_score> | |
66 <Hsp_evalue>0</Hsp_evalue> | |
67 <Hsp_query-from>1</Hsp_query-from> | |
68 <Hsp_query-to>348</Hsp_query-to> | |
69 <Hsp_hit-from>1</Hsp_hit-from> | |
70 <Hsp_hit-to>348</Hsp_hit-to> | |
71 <Hsp_query-frame>0</Hsp_query-frame> | |
72 <Hsp_hit-frame>0</Hsp_hit-frame> | |
73 <Hsp_identity>346</Hsp_identity> | |
74 <Hsp_positive>347</Hsp_positive> | |
75 <Hsp_gaps>0</Hsp_gaps> | |
76 <Hsp_align-len>348</Hsp_align-len> | |
77 <Hsp_qseq>MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA</Hsp_qseq> | |
78 <Hsp_hseq>MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTASKTETSQVAPA</Hsp_hseq> | |
79 <Hsp_midline>MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVA+LFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTT SKTETSQVAPA</Hsp_midline> | |
80 </Hsp> | |
81 </Hit_hsps> | |
82 </Hit> | |
83 </Iteration_hits> | |
84 <Iteration_stat> | |
85 <Statistics> | |
86 <Statistics_db-num>49886901</Statistics_db-num> | |
87 <Statistics_db-len>17905752166</Statistics_db-len> | |
88 <Statistics_hsp-len>149</Statistics_hsp-len> | |
89 <Statistics_eff-space>2084048179483</Statistics_eff-space> | |
90 <Statistics_kappa>0.041</Statistics_kappa> | |
91 <Statistics_lambda>0.267</Statistics_lambda> | |
92 <Statistics_entropy>0.14</Statistics_entropy> | |
93 </Statistics> | |
94 </Iteration_stat> | |
95 </Iteration> | |
96 <Iteration> | |
97 <Iteration_iter-num>2</Iteration_iter-num> | |
98 <Iteration_query-ID>Query_2</Iteration_query-ID> | |
99 <Iteration_query-def>gi|3024260|sp|P56514.1|OPSD_BUFBU RecName: Full=Rhodopsin</Iteration_query-def> | |
100 <Iteration_query-len>354</Iteration_query-len> | |
101 <Iteration_hits> | |
102 <Hit> | |
103 <Hit_num>1</Hit_num> | |
104 <Hit_id>gi|3024260|sp|P56514.1|OPSD_BUFBU</Hit_id> | |
105 <Hit_def>RecName: Full=Rhodopsin >gi|2734706|gb|AAB93704.1| rhodopsin [Bufo bufo]</Hit_def> | |
106 <Hit_accession>P56514</Hit_accession> | |
107 <Hit_len>354</Hit_len> | |
108 <Hit_hsps> | |
109 <Hsp> | |
110 <Hsp_num>1</Hsp_num> | |
111 <Hsp_bit-score>729.169</Hsp_bit-score> | |
112 <Hsp_score>1881</Hsp_score> | |
113 <Hsp_evalue>0</Hsp_evalue> | |
114 <Hsp_query-from>1</Hsp_query-from> | |
115 <Hsp_query-to>354</Hsp_query-to> | |
116 <Hsp_hit-from>1</Hsp_hit-from> | |
117 <Hsp_hit-to>354</Hsp_hit-to> | |
118 <Hsp_query-frame>0</Hsp_query-frame> | |
119 <Hsp_hit-frame>0</Hsp_hit-frame> | |
120 <Hsp_identity>354</Hsp_identity> | |
121 <Hsp_positive>354</Hsp_positive> | |
122 <Hsp_gaps>0</Hsp_gaps> | |
123 <Hsp_align-len>354</Hsp_align-len> | |
124 <Hsp_qseq>MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIIIFFCYGRLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQGSEFGPIFMTVPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGEDDASSAATSKTEASSVSSSQVSPA</Hsp_qseq> | |
125 <Hsp_hseq>MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIIIFFCYGRLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQGSEFGPIFMTVPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGEDDASSAATSKTEASSVSSSQVSPA</Hsp_hseq> | |
126 <Hsp_midline>MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIIIFFCYGRLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQGSEFGPIFMTVPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGEDDASSAATSKTEASSVSSSQVSPA</Hsp_midline> | |
127 </Hsp> | |
128 </Hit_hsps> | |
129 </Hit> | |
130 <Hit> | |
131 <Hit_num>2</Hit_num> | |
132 <Hit_id>gi|3024261|sp|P56515.1|OPSD_BUFMA</Hit_id> | |
133 <Hit_def>RecName: Full=Rhodopsin >gi|2734708|gb|AAB93705.1| rhodopsin [Rhinella marina]</Hit_def> | |
134 <Hit_accession>P56515</Hit_accession> | |
135 <Hit_len>354</Hit_len> | |
136 <Hit_hsps> | |
137 <Hsp> | |
138 <Hsp_num>1</Hsp_num> | |
139 <Hsp_bit-score>691.419</Hsp_bit-score> | |
140 <Hsp_score>1783</Hsp_score> | |
141 <Hsp_evalue>0</Hsp_evalue> | |
142 <Hsp_query-from>1</Hsp_query-from> | |
143 <Hsp_query-to>354</Hsp_query-to> | |
144 <Hsp_hit-from>1</Hsp_hit-from> | |
145 <Hsp_hit-to>354</Hsp_hit-to> | |
146 <Hsp_query-frame>0</Hsp_query-frame> | |
147 <Hsp_hit-frame>0</Hsp_hit-frame> | |
148 <Hsp_identity>339</Hsp_identity> | |
149 <Hsp_positive>349</Hsp_positive> | |
150 <Hsp_gaps>0</Hsp_gaps> | |
151 <Hsp_align-len>354</Hsp_align-len> | |
152 <Hsp_qseq>MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIIIFFCYGRLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQGSEFGPIFMTVPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGEDDASSAATSKTEASSVSSSQVSPA</Hsp_qseq> | |
153 <Hsp_hseq>MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSVLCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFVFGQTGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAIMGVAFTWIMALACAAPPLFGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFLIPLIIIFFCYGRLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIFTHQGSEFGPVFMTIPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGDEDASSAATSKTEASSVSSSQVSPA</Hsp_hseq> | |
154 <Hsp_midline>MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYS+LCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYF+ G TGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHA+MGVAFTWIMAL+CA PPL GWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHF IPLIIIFFCYGRLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIF++QGSEFGP+FMT+PAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFG++DASSAATSKTEASSVSSSQVSPA</Hsp_midline> | |
155 </Hsp> | |
156 </Hit_hsps> | |
157 </Hit> | |
158 </Iteration_hits> | |
159 <Iteration_stat> | |
160 <Statistics> | |
161 <Statistics_db-num>49886901</Statistics_db-num> | |
162 <Statistics_db-len>17905752166</Statistics_db-len> | |
163 <Statistics_hsp-len>149</Statistics_hsp-len> | |
164 <Statistics_eff-space>2146883802985</Statistics_eff-space> | |
165 <Statistics_kappa>0.041</Statistics_kappa> | |
166 <Statistics_lambda>0.267</Statistics_lambda> | |
167 <Statistics_entropy>0.14</Statistics_entropy> | |
168 </Statistics> | |
169 </Iteration_stat> | |
170 </Iteration> | |
171 <Iteration> | |
172 <Iteration_iter-num>3</Iteration_iter-num> | |
173 <Iteration_query-ID>Query_3</Iteration_query-ID> | |
174 <Iteration_query-def>gibberish</Iteration_query-def> | |
175 <Iteration_query-len>75</Iteration_query-len> | |
176 <Iteration_hits> | |
177 </Iteration_hits> | |
178 <Iteration_stat> | |
179 <Statistics> | |
180 <Statistics_db-num>49886901</Statistics_db-num> | |
181 <Statistics_db-len>17905752166</Statistics_db-len> | |
182 <Statistics_hsp-len>46</Statistics_hsp-len> | |
183 <Statistics_eff-space>452717686880</Statistics_eff-space> | |
184 <Statistics_kappa>0.041</Statistics_kappa> | |
185 <Statistics_lambda>0.267</Statistics_lambda> | |
186 <Statistics_entropy>0.14</Statistics_entropy> | |
187 </Statistics> | |
188 </Iteration_stat> | |
189 <Iteration_message>lcl|Query_3 gibberish: lcl|Query_3 gibberish: Warning: One or more U or O characters replaced by X for alignment score calculations at positions 46 No hits found</Iteration_message> | |
190 </Iteration> | |
191 <Iteration> | |
192 <Iteration_iter-num>4</Iteration_iter-num> | |
193 <Iteration_query-ID>Query_4</Iteration_query-ID> | |
194 <Iteration_query-def>gi|283855846|gb|ADB45242.1| rhodopsin [Cynopterus brachyotis]</Iteration_query-def> | |
195 <Iteration_query-len>328</Iteration_query-len> | |
196 <Iteration_hits> | |
197 <Hit> | |
198 <Hit_num>1</Hit_num> | |
199 <Hit_id>gi|283855846|gb|ADB45242.1|</Hit_id> | |
200 <Hit_def>rhodopsin [Cynopterus brachyotis]</Hit_def> | |
201 <Hit_accession>ADB45242</Hit_accession> | |
202 <Hit_len>328</Hit_len> | |
203 <Hit_hsps> | |
204 <Hsp> | |
205 <Hsp_num>1</Hsp_num> | |
206 <Hsp_bit-score>677.552</Hsp_bit-score> | |
207 <Hsp_score>1747</Hsp_score> | |
208 <Hsp_evalue>0</Hsp_evalue> | |
209 <Hsp_query-from>1</Hsp_query-from> | |
210 <Hsp_query-to>328</Hsp_query-to> | |
211 <Hsp_hit-from>1</Hsp_hit-from> | |
212 <Hsp_hit-to>328</Hsp_hit-to> | |
213 <Hsp_query-frame>0</Hsp_query-frame> | |
214 <Hsp_hit-frame>0</Hsp_hit-frame> | |
215 <Hsp_identity>328</Hsp_identity> | |
216 <Hsp_positive>328</Hsp_positive> | |
217 <Hsp_gaps>0</Hsp_gaps> | |
218 <Hsp_align-len>328</Hsp_align-len> | |
219 <Hsp_qseq>VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_qseq> | |
220 <Hsp_hseq>VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_hseq> | |
221 <Hsp_midline>VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_midline> | |
222 </Hsp> | |
223 </Hit_hsps> | |
224 </Hit> | |
225 <Hit> | |
226 <Hit_num>2</Hit_num> | |
227 <Hit_id>gi|283855848|gb|ADB45243.1|</Hit_id> | |
228 <Hit_def>rhodopsin [Dobsonia viridis]</Hit_def> | |
229 <Hit_accession>ADB45243</Hit_accession> | |
230 <Hit_len>328</Hit_len> | |
231 <Hit_hsps> | |
232 <Hsp> | |
233 <Hsp_num>1</Hsp_num> | |
234 <Hsp_bit-score>674.47</Hsp_bit-score> | |
235 <Hsp_score>1739</Hsp_score> | |
236 <Hsp_evalue>0</Hsp_evalue> | |
237 <Hsp_query-from>1</Hsp_query-from> | |
238 <Hsp_query-to>328</Hsp_query-to> | |
239 <Hsp_hit-from>1</Hsp_hit-from> | |
240 <Hsp_hit-to>328</Hsp_hit-to> | |
241 <Hsp_query-frame>0</Hsp_query-frame> | |
242 <Hsp_hit-frame>0</Hsp_hit-frame> | |
243 <Hsp_identity>326</Hsp_identity> | |
244 <Hsp_positive>328</Hsp_positive> | |
245 <Hsp_gaps>0</Hsp_gaps> | |
246 <Hsp_align-len>328</Hsp_align-len> | |
247 <Hsp_qseq>VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_qseq> | |
248 <Hsp_hseq>VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKTSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGEDEASTTAS</Hsp_hseq> | |
249 <Hsp_midline>VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAK+SSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLG+DEASTTAS</Hsp_midline> | |
250 </Hsp> | |
251 </Hit_hsps> | |
252 </Hit> | |
253 </Iteration_hits> | |
254 <Iteration_stat> | |
255 <Statistics> | |
256 <Statistics_db-num>49886901</Statistics_db-num> | |
257 <Statistics_db-len>17905752166</Statistics_db-len> | |
258 <Statistics_hsp-len>148</Statistics_hsp-len> | |
259 <Statistics_eff-space>1894048347240</Statistics_eff-space> | |
260 <Statistics_kappa>0.041</Statistics_kappa> | |
261 <Statistics_lambda>0.267</Statistics_lambda> | |
262 <Statistics_entropy>0.14</Statistics_entropy> | |
263 </Statistics> | |
264 </Iteration_stat> | |
265 </Iteration> | |
266 <Iteration> | |
267 <Iteration_iter-num>5</Iteration_iter-num> | |
268 <Iteration_query-ID>Query_5</Iteration_query-ID> | |
269 <Iteration_query-def>gi|283855823|gb|ADB45229.1| rhodopsin [Myotis pilosus]</Iteration_query-def> | |
270 <Iteration_query-len>328</Iteration_query-len> | |
271 <Iteration_hits> | |
272 <Hit> | |
273 <Hit_num>1</Hit_num> | |
274 <Hit_id>gi|283855823|gb|ADB45229.1|</Hit_id> | |
275 <Hit_def>rhodopsin [Myotis ricketti]</Hit_def> | |
276 <Hit_accession>ADB45229</Hit_accession> | |
277 <Hit_len>328</Hit_len> | |
278 <Hit_hsps> | |
279 <Hsp> | |
280 <Hsp_num>1</Hsp_num> | |
281 <Hsp_bit-score>676.781</Hsp_bit-score> | |
282 <Hsp_score>1745</Hsp_score> | |
283 <Hsp_evalue>0</Hsp_evalue> | |
284 <Hsp_query-from>1</Hsp_query-from> | |
285 <Hsp_query-to>328</Hsp_query-to> | |
286 <Hsp_hit-from>1</Hsp_hit-from> | |
287 <Hsp_hit-to>328</Hsp_hit-to> | |
288 <Hsp_query-frame>0</Hsp_query-frame> | |
289 <Hsp_hit-frame>0</Hsp_hit-frame> | |
290 <Hsp_identity>328</Hsp_identity> | |
291 <Hsp_positive>328</Hsp_positive> | |
292 <Hsp_gaps>0</Hsp_gaps> | |
293 <Hsp_align-len>328</Hsp_align-len> | |
294 <Hsp_qseq>VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_qseq> | |
295 <Hsp_hseq>VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_hseq> | |
296 <Hsp_midline>VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_midline> | |
297 </Hsp> | |
298 </Hit_hsps> | |
299 </Hit> | |
300 <Hit> | |
301 <Hit_num>2</Hit_num> | |
302 <Hit_id>gi|584076339|ref|XP_006758363.1|</Hit_id> | |
303 <Hit_def>PREDICTED: rhodopsin [Myotis davidii] >gi|432110912|gb|ELK34386.1| Rhodopsin [Myotis davidii]</Hit_def> | |
304 <Hit_accession>XP_006758363</Hit_accession> | |
305 <Hit_len>348</Hit_len> | |
306 <Hit_hsps> | |
307 <Hsp> | |
308 <Hsp_num>1</Hsp_num> | |
309 <Hsp_bit-score>676.396</Hsp_bit-score> | |
310 <Hsp_score>1744</Hsp_score> | |
311 <Hsp_evalue>0</Hsp_evalue> | |
312 <Hsp_query-from>1</Hsp_query-from> | |
313 <Hsp_query-to>328</Hsp_query-to> | |
314 <Hsp_hit-from>11</Hsp_hit-from> | |
315 <Hsp_hit-to>338</Hsp_hit-to> | |
316 <Hsp_query-frame>0</Hsp_query-frame> | |
317 <Hsp_hit-frame>0</Hsp_hit-frame> | |
318 <Hsp_identity>328</Hsp_identity> | |
319 <Hsp_positive>328</Hsp_positive> | |
320 <Hsp_gaps>0</Hsp_gaps> | |
321 <Hsp_align-len>328</Hsp_align-len> | |
322 <Hsp_qseq>VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_qseq> | |
323 <Hsp_hseq>VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_hseq> | |
324 <Hsp_midline>VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_midline> | |
325 </Hsp> | |
326 </Hit_hsps> | |
327 </Hit> | |
328 </Iteration_hits> | |
329 <Iteration_stat> | |
330 <Statistics> | |
331 <Statistics_db-num>49886901</Statistics_db-num> | |
332 <Statistics_db-len>17905752166</Statistics_db-len> | |
333 <Statistics_hsp-len>148</Statistics_hsp-len> | |
334 <Statistics_eff-space>1894048347240</Statistics_eff-space> | |
335 <Statistics_kappa>0.041</Statistics_kappa> | |
336 <Statistics_lambda>0.267</Statistics_lambda> | |
337 <Statistics_entropy>0.14</Statistics_entropy> | |
338 </Statistics> | |
339 </Iteration_stat> | |
340 </Iteration> | |
341 <Iteration> | |
342 <Iteration_iter-num>6</Iteration_iter-num> | |
343 <Iteration_query-ID>Query_6</Iteration_query-ID> | |
344 <Iteration_query-def>gi|223523|prf||0811197A rhodopsin [Bos taurus]</Iteration_query-def> | |
345 <Iteration_query-len>347</Iteration_query-len> | |
346 <Iteration_hits> | |
347 <Hit> | |
348 <Hit_num>1</Hit_num> | |
349 <Hit_id>gi|223523|prf||0811197A</Hit_id> | |
350 <Hit_def>rhodopsin</Hit_def> | |
351 <Hit_accession>0811197A</Hit_accession> | |
352 <Hit_len>347</Hit_len> | |
353 <Hit_hsps> | |
354 <Hsp> | |
355 <Hsp_num>1</Hsp_num> | |
356 <Hsp_bit-score>717.227</Hsp_bit-score> | |
357 <Hsp_score>1850</Hsp_score> | |
358 <Hsp_evalue>0</Hsp_evalue> | |
359 <Hsp_query-from>1</Hsp_query-from> | |
360 <Hsp_query-to>347</Hsp_query-to> | |
361 <Hsp_hit-from>1</Hsp_hit-from> | |
362 <Hsp_hit-to>347</Hsp_hit-to> | |
363 <Hsp_query-frame>0</Hsp_query-frame> | |
364 <Hsp_hit-frame>0</Hsp_hit-frame> | |
365 <Hsp_identity>347</Hsp_identity> | |
366 <Hsp_positive>347</Hsp_positive> | |
367 <Hsp_gaps>0</Hsp_gaps> | |
368 <Hsp_align-len>347</Hsp_align-len> | |
369 <Hsp_qseq>MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA</Hsp_qseq> | |
370 <Hsp_hseq>MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA</Hsp_hseq> | |
371 <Hsp_midline>MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA</Hsp_midline> | |
372 </Hsp> | |
373 </Hit_hsps> | |
374 </Hit> | |
375 <Hit> | |
376 <Hit_num>2</Hit_num> | |
377 <Hit_id>gi|62460472|ref|NP_001014890.1|</Hit_id> | |
378 <Hit_def>rhodopsin [Bos taurus] >gi|129204|sp|P02699.1|OPSD_BOVIN RecName: Full=Rhodopsin [Bos taurus] >gi|16975387|pdb|1JFP|A Chain A, Structure Of Bovine Rhodopsin (Dark Adapted) >gi|22219255|pdb|1LN6|A Chain A, Structure Of Bovine Rhodopsin (Metarhodopsin Ii) >gi|192988480|pdb|3CAP|A Chain A, Crystal Structure Of Native Opsin: The G Protein-Coupled Receptor Rhodopsin In Its Ligand-Free State >gi|192988481|pdb|3CAP|B Chain B, Crystal Structure Of Native Opsin: The G Protein-Coupled Receptor Rhodopsin In Its Ligand-Free State >gi|195927457|pdb|3C9L|A Chain A, Structure Of Ground-State Bovine Rhodospin In A Hexagonal Crystal Form >gi|197107530|pdb|1F88|A Chain A, Crystal Structure Of Bovine Rhodopsin >gi|197107531|pdb|1F88|B Chain B, Crystal Structure Of Bovine Rhodopsin >gi|206582030|pdb|3DQB|A Chain A, Crystal Structure Of The Active G-protein-coupled Receptor Opsin In Complex With A C-terminal Peptide Derived From The Galpha Subunit Of Transducin >gi|325533987|pdb|3PQR|A Chain A, Crystal Structure Of Metarhodopsin Ii In Complex With A C-Terminal Peptide Derived From The Galpha Subunit Of Transducin >gi|325534012|pdb|3PXO|A Chain A, Crystal Structure Of Metarhodopsin Ii >gi|554793513|pdb|4J4Q|A Chain A, Crystal Structure Of Active Conformation Of Gpcr Opsin Stabilized By Octylglucoside >gi|685425707|pdb|4PXF|A Chain A, Crystal Structure Of The Active G-protein-coupled Receptor Opsin In Complex With The Finger-loop Peptide Derived From The Full-length Arrestin-1 >gi|163443|gb|AAA30674.1| rhodopsin [Bos taurus] >gi|18148871|dbj|BAB83621.1| rhodopsin [synthetic construct] >gi|296474712|tpg|DAA16827.1| TPA: rhodopsin [Bos taurus] >gi|223563|prf||0901188A rhodopsin >gi|223567|prf||0901212A rhodopsin >gi|223818|prf||1001148A rhodopsin</Hit_def> | |
379 <Hit_accession>NP_001014890</Hit_accession> | |
380 <Hit_len>348</Hit_len> | |
381 <Hit_hsps> | |
382 <Hsp> | |
383 <Hsp_num>1</Hsp_num> | |
384 <Hsp_bit-score>712.22</Hsp_bit-score> | |
385 <Hsp_score>1837</Hsp_score> | |
386 <Hsp_evalue>0</Hsp_evalue> | |
387 <Hsp_query-from>1</Hsp_query-from> | |
388 <Hsp_query-to>347</Hsp_query-to> | |
389 <Hsp_hit-from>1</Hsp_hit-from> | |
390 <Hsp_hit-to>348</Hsp_hit-to> | |
391 <Hsp_query-frame>0</Hsp_query-frame> | |
392 <Hsp_hit-frame>0</Hsp_hit-frame> | |
393 <Hsp_identity>347</Hsp_identity> | |
394 <Hsp_positive>347</Hsp_positive> | |
395 <Hsp_gaps>1</Hsp_gaps> | |
396 <Hsp_align-len>348</Hsp_align-len> | |
397 <Hsp_qseq>MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGID-YTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA</Hsp_qseq> | |
398 <Hsp_hseq>MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA</Hsp_hseq> | |
399 <Hsp_midline>MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGID YTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA</Hsp_midline> | |
400 </Hsp> | |
401 </Hit_hsps> | |
402 </Hit> | |
403 </Iteration_hits> | |
404 <Iteration_stat> | |
405 <Statistics> | |
406 <Statistics_db-num>49886901</Statistics_db-num> | |
407 <Statistics_db-len>17905752166</Statistics_db-len> | |
408 <Statistics_hsp-len>149</Statistics_hsp-len> | |
409 <Statistics_eff-space>2073575575566</Statistics_eff-space> | |
410 <Statistics_kappa>0.041</Statistics_kappa> | |
411 <Statistics_lambda>0.267</Statistics_lambda> | |
412 <Statistics_entropy>0.14</Statistics_entropy> | |
413 </Statistics> | |
414 </Iteration_stat> | |
415 </Iteration> | |
416 <Iteration> | |
417 <Iteration_iter-num>7</Iteration_iter-num> | |
418 <Iteration_query-ID>Query_7</Iteration_query-ID> | |
419 <Iteration_query-def>gi|12583665|dbj|BAB21486.1| fresh water form rod opsin [Conger myriaster]</Iteration_query-def> | |
420 <Iteration_query-len>354</Iteration_query-len> | |
421 <Iteration_hits> | |
422 <Hit> | |
423 <Hit_num>1</Hit_num> | |
424 <Hit_id>gi|12583665|dbj|BAB21486.1|</Hit_id> | |
425 <Hit_def>fresh water form rod opsin [Conger myriaster]</Hit_def> | |
426 <Hit_accession>BAB21486</Hit_accession> | |
427 <Hit_len>354</Hit_len> | |
428 <Hit_hsps> | |
429 <Hsp> | |
430 <Hsp_num>1</Hsp_num> | |
431 <Hsp_bit-score>731.095</Hsp_bit-score> | |
432 <Hsp_score>1886</Hsp_score> | |
433 <Hsp_evalue>0</Hsp_evalue> | |
434 <Hsp_query-from>1</Hsp_query-from> | |
435 <Hsp_query-to>354</Hsp_query-to> | |
436 <Hsp_hit-from>1</Hsp_hit-from> | |
437 <Hsp_hit-to>354</Hsp_hit-to> | |
438 <Hsp_query-frame>0</Hsp_query-frame> | |
439 <Hsp_hit-frame>0</Hsp_hit-frame> | |
440 <Hsp_identity>354</Hsp_identity> | |
441 <Hsp_positive>354</Hsp_positive> | |
442 <Hsp_gaps>0</Hsp_gaps> | |
443 <Hsp_align-len>354</Hsp_align-len> | |
444 <Hsp_qseq>MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEEDGASATSSKTEASSVSSSSVSPA</Hsp_qseq> | |
445 <Hsp_hseq>MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEEDGASATSSKTEASSVSSSSVSPA</Hsp_hseq> | |
446 <Hsp_midline>MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEEDGASATSSKTEASSVSSSSVSPA</Hsp_midline> | |
447 </Hsp> | |
448 </Hit_hsps> | |
449 </Hit> | |
450 <Hit> | |
451 <Hit_num>2</Hit_num> | |
452 <Hit_id>gi|5931796|emb|CAB56646.1|</Hit_id> | |
453 <Hit_def>rod opsin [Anguilla japonica]</Hit_def> | |
454 <Hit_accession>CAB56646</Hit_accession> | |
455 <Hit_len>352</Hit_len> | |
456 <Hit_hsps> | |
457 <Hsp> | |
458 <Hsp_num>1</Hsp_num> | |
459 <Hsp_bit-score>663.685</Hsp_bit-score> | |
460 <Hsp_score>1711</Hsp_score> | |
461 <Hsp_evalue>0</Hsp_evalue> | |
462 <Hsp_query-from>1</Hsp_query-from> | |
463 <Hsp_query-to>343</Hsp_query-to> | |
464 <Hsp_hit-from>1</Hsp_hit-from> | |
465 <Hsp_hit-to>343</Hsp_hit-to> | |
466 <Hsp_query-frame>0</Hsp_query-frame> | |
467 <Hsp_hit-frame>0</Hsp_hit-frame> | |
468 <Hsp_identity>315</Hsp_identity> | |
469 <Hsp_positive>331</Hsp_positive> | |
470 <Hsp_gaps>0</Hsp_gaps> | |
471 <Hsp_align-len>343</Hsp_align-len> | |
472 <Hsp_qseq>MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEEDGASATSSKTEA</Hsp_qseq> | |
473 <Hsp_hseq>MNGTEGPNFYVPMSNATGVVRSPFEYPQYYLAEPWAYSALAAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWVVVCKPMSNFRFGENHAIMGVAFTWLMALACAAPPLFGWSRYIPEGMQCSCGIDYYTPNPETYNESFVIYMFVCHFTIPLTVVSFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSSFGPIFMTIPAFFAKSSALYNPLIYICMNKQFRNCMITTLCCGKNPFEEEEGASTTASKTEA</Hsp_hseq> | |
474 <Hsp_midline>MNGTEGPNFY+PMSNATGVVRSPFEYPQYYLAEPWA+SAL+AYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERW+VVCKP++NFRFGE+HAIMGV TW MALACA PPLFGWSRYIPEG+QCSCGIDYYT P NESFVIYMF CHF+IPL V+SFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGS+FGPIFMTIP+FFAKSSALYNP+IYICMNKQFR+CMITTLCCGKNPFEEE+GAS T+SKTEA</Hsp_midline> | |
475 </Hsp> | |
476 </Hit_hsps> | |
477 </Hit> | |
478 </Iteration_hits> | |
479 <Iteration_stat> | |
480 <Statistics> | |
481 <Statistics_db-num>49886901</Statistics_db-num> | |
482 <Statistics_db-len>17905752166</Statistics_db-len> | |
483 <Statistics_hsp-len>149</Statistics_hsp-len> | |
484 <Statistics_eff-space>2146883802985</Statistics_eff-space> | |
485 <Statistics_kappa>0.041</Statistics_kappa> | |
486 <Statistics_lambda>0.267</Statistics_lambda> | |
487 <Statistics_entropy>0.14</Statistics_entropy> | |
488 </Statistics> | |
489 </Iteration_stat> | |
490 </Iteration> | |
491 </BlastOutput_iterations> | |
492 </BlastOutput> | |
493 |