Mercurial > repos > galaxyp > eggnog_mapper

diff eggnog_mapper.xml @ 10:bcb4895b8b55 draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/eggnog_mapper/eggnog_mapper commit 622d8d475193f3717d26f45fd7c8f5868e9a2d0d
author galaxyp
date Tue, 07 Jun 2022 14:56:44 +0000
parents 63662ae295d6
children 5a30ae278db0
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--- a/eggnog_mapper.xml	Sun Feb 13 15:29:04 2022 +0000
+++ b/eggnog_mapper.xml	Tue Jun 07 14:56:44 2022 +0000
@@ -1,4 +1,4 @@
-<tool id="eggnog_mapper" name="eggNOG Mapper" version="@VERSION@+galaxy1">
+<tool id="eggnog_mapper" name="eggNOG Mapper" version="@VERSION@+galaxy2">
     <description>functional sequence annotation by orthology</description>
     <macros>
         <import>eggnog_macros.xml</import>
@@ -81,16 +81,16 @@
                 <param name="translate" type="boolean" truevalue="--translate" falsevalue="" checked="false"
                     label="Translate predicted CDS from blastx hits to proteins"/>
                 <param argument="--genepred" type="select" label="Type of sequences">
-                    <option value="search" selected="true">Inferred from Diamond/MMseqs2 blastx hits</option>
-                    <option value="prodigal">Performed using Prodigal</option>
+                    <option value="search">Inferred from Diamond/MMseqs2 blastx hits</option>
+                    <option value="prodigal" selected="true">Performed using Prodigal</option>
                 </param>
             </when>
             <when value="metagenome">
                 <param name="translate" type="boolean" truevalue="--translate" falsevalue="" checked="false"
                     label="Translate predicted CDS from blastx hits to proteins"/>
                 <param argument="--genepred" type="select" label="Type of sequences">
-                    <option value="search" selected="true">Inferred from Diamond/MMseqs2 blastx hits</option>
-                    <option value="prodigal">Performed using Prodigal</option>
+                    <option value="search">Inferred from Diamond/MMseqs2 blastx hits</option>
+                    <option value="prodigal" selected="true">Performed using Prodigal</option>
                 </param>
             </when>
         </conditional>