Mercurial > repos > galaxyp > maldi_quant_peak_detection
annotate test-data/Example_Processed.imzML @ 7:160538a890a6 draft default tip
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
| author | galaxyp |
|---|---|
| date | Sat, 04 Mar 2023 19:14:04 +0000 |
| parents | |
| children |
| rev | line source |
|---|---|
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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1 <?xml version="1.0" encoding="ISO-8859-1"?> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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2 <mzML xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psi.hupo.org/ms/mzml http://psidev.info/files/ms/mzML/xsd/mzML1.1.0.xsd" xmlns="http://psi.hupo.org/ms/mzml" version="1.1"> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
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3 <cvList count="4"> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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4 <cv URI="http://ontologies.berkeleybop.org/pato.obo" fullName="Phenotype And Trait Ontology" id="PATO" version="releases/2017-07-10"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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5 <cv URI="http://ontologies.berkeleybop.org/uo.obo" fullName="Units of Measurement Ontology" id="UO" version="releases/2017-09-25"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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6 <cv URI="https://raw.githubusercontent.com/hupo-psi/psi-ms-cv/master/psi-ms.obo" fullName="Proteomics Standards Initiative Mass Spectrometry Ontology" id="MS" version="4.1.0"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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7 <cv URI="https://raw.githubusercontent.com/imzML/imzML/master/imagingMS.obo" fullName="Mass Spectrometry Imaging Ontology" id="IMS" version="1.1.0"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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8 </cvList> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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9 <fileDescription> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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10 <fileContent> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
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11 <cvParam cvRef="MS" accession="MS:1000579" name="MS1 spectrum"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
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12 <cvParam cvRef="MS" accession="MS:1000128" name="profile spectrum"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
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13 <cvParam cvRef="IMS" accession="IMS:1000080" name="universally unique identifier" value="9d501bdc53444916b7e97e795b02c856"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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14 <cvParam cvRef="IMS" accession="IMS:1000091" name="ibd SHA-1" value="7e8fdb93053915d3edb51b70aa0619ac209964df"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
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15 <cvParam cvRef="IMS" accession="IMS:1000031" name="processed"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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16 </fileContent> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
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17 <sourceFileList count="1"> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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18 <sourceFile id="sf1" location="C:\Users\Thorsten Schramm\Documents\Promotion\imzML\Website\files\Beispiel-Dateien\Example images\" name="Example.raw"> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
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19 <cvParam cvRef="MS" accession="MS:1000563" name="Thermo RAW format"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
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20 <cvParam cvRef="MS" accession="MS:1000768" name="Thermo nativeID format"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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21 <cvParam cvRef="MS" accession="MS:1000569" name="SHA-1" value="7623BE263B25FF99FDF017154B86FAB742D4BB0B"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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22 </sourceFile> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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23 </sourceFileList> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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24 <contact> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
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25 <cvParam cvRef="MS" accession="MS:1000586" name="contact name" value="Thorsten Schramm"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
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26 <cvParam cvRef="MS" accession="MS:1000590" name="contact affiliation" value="Institut für Anorganische und Analytische Chemie"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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27 <cvParam cvRef="MS" accession="MS:1000587" name="contact address" value="Schubertstraße 60, Haus 16, Gießen, Germany"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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28 <cvParam cvRef="MS" accession="MS:1000589" name="contact email" value="thorsten.schramm@anorg.chemie.uni-.giessen.de"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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29 </contact> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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30 </fileDescription> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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31 <referenceableParamGroupList count="4"> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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32 <referenceableParamGroup id="mzArray"> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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33 <cvParam cvRef="MS" accession="MS:1000576" name="no compression"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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34 <cvParam cvRef="MS" accession="MS:1000514" name="m/z array" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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35 <cvParam cvRef="IMS" accession="IMS:1000101" name="external data" value="true"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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36 <cvParam cvRef="MS" accession="MS:1000521" name="32-bit float"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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37 </referenceableParamGroup> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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38 <referenceableParamGroup id="intensityArray"> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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39 <cvParam cvRef="MS" accession="MS:1000576" name="no compression"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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40 <cvParam cvRef="MS" accession="MS:1000515" name="intensity array" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of detector counts"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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41 <cvParam cvRef="IMS" accession="IMS:1000101" name="external data" value="true"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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42 <cvParam cvRef="MS" accession="MS:1000521" name="32-bit float"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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43 </referenceableParamGroup> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
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44 <referenceableParamGroup id="scan1"> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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45 <cvParam cvRef="MS" accession="MS:1000093" name="increasing m/z scan"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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46 <cvParam cvRef="MS" accession="MS:1000512" name="filter string" value="ITMS - p NSI Full ms [100,00-800,00]"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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47 </referenceableParamGroup> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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48 <referenceableParamGroup id="spectrum1"> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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49 <cvParam cvRef="MS" accession="MS:1000579" name="MS1 spectrum"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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50 <cvParam cvRef="MS" accession="MS:1000511" name="ms level" value="0"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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51 <cvParam cvRef="MS" accession="MS:1000128" name="profile spectrum"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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52 <cvParam cvRef="MS" accession="MS:1000129" name="negative scan"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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53 </referenceableParamGroup> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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54 </referenceableParamGroupList> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
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55 <sampleList count="1"> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
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56 <sample id="sample1" name="Sample1"> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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57 <cvParam cvRef="MS" accession="MS:1000001" name="sample number" value="1"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
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58 </sample> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
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59 </sampleList> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
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60 <softwareList count="2"> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
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61 <software id="Xcalibur" version="2.2"> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
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62 <cvParam cvRef="MS" accession="MS:1000532" name="Xcalibur"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
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63 </software> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
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64 <software id="TMC" version="1.1 beta"> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
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65 <cvParam cvRef="MS" accession="MS:1000799" name="custom unreleased software tool" value=""/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
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66 </software> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
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67 </softwareList> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
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68 <scanSettingsList count="1"> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
69 <scanSettings id="scansettings1"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
70 <cvParam cvRef="IMS" accession="IMS:1000401" name="top down"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
71 <cvParam cvRef="IMS" accession="IMS:1000413" name="flyback"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
72 <cvParam cvRef="IMS" accession="IMS:1000480" name="horizontal line scan"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
73 <cvParam cvRef="IMS" accession="IMS:1000491" name="linescan left right"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
74 <cvParam cvRef="IMS" accession="IMS:1000042" name="max count of pixels x" value="3"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
75 <cvParam cvRef="IMS" accession="IMS:1000043" name="max count of pixels y" value="3"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
76 <cvParam cvRef="IMS" accession="IMS:1000044" name="max dimension x" value="300" unitCvRef="UO" unitAccession="UO:0000017" unitName="micrometer"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
77 <cvParam cvRef="IMS" accession="IMS:1000045" name="max dimension y" value="300" unitCvRef="UO" unitAccession="UO:0000017" unitName="micrometer"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
78 <cvParam cvRef="IMS" accession="IMS:1000046" name="pixel size (x)" value="100.0" unitCvRef="UO" unitAccession="UO:0000017" unitName="micrometer"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
79 <cvParam cvRef="IMS" accession="IMS:1000047" name="pixel size y" value="100.0" unitCvRef="UO" unitAccession="UO:0000017" unitName="micrometer"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
80 </scanSettings> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
81 </scanSettingsList> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
82 <instrumentConfigurationList count="1"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
83 <instrumentConfiguration id="LTQFTUltra0"> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
84 <cvParam cvRef="MS" accession="MS:1000557" name="LTQ FT Ultra"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
85 <cvParam cvRef="MS" accession="MS:1000529" name="instrument serial number" value="none"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
86 <componentList count="3"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
87 <source order="1"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
88 <cvParam cvRef="MS" accession="MS:1000073" name="electrospray ionization"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
89 <cvParam cvRef="MS" accession="MS:1000485" name="nanospray inlet"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
90 <cvParam cvRef="MS" accession="MS:1000844" name="focus diameter x" value="10.0"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
91 <cvParam cvRef="MS" accession="MS:1000845" name="focus diameter y" value="10.0"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
92 <cvParam cvRef="MS" accession="MS:1000846" name="pulse energy" value="10.0"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
93 <cvParam cvRef="MS" accession="MS:1000847" name="pulse duration" value="10.0"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
94 <cvParam cvRef="MS" accession="MS:1000848" name="attenuation" value="50.0"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
95 <cvParam cvRef="MS" accession="MS:1000850" name="gas laser"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
96 <cvParam cvRef="MS" accession="MS:1000836" name="dried droplet MALDI matrix preparation"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
97 <cvParam cvRef="MS" accession="MS:1000835" name="matrix solution concentration" value="10.0"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
98 <cvParam cvRef="MS" accession="MS:1000834" name="matrix solution" value="DHB"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
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|
99 </source> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
100 <analyzer order="2"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
101 <cvParam cvRef="MS" accession="MS:1000264" name="ion trap"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
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|
102 <cvParam cvRef="MS" accession="MS:1000014" name="accuracy" value="0.0" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
103 </analyzer> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
104 <detector order="3"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
105 <cvParam cvRef="MS" accession="MS:1000253" name="electron multiplier"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
106 <cvParam cvRef="MS" accession="MS:1000120" name="transient recorder"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
107 </detector> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
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108 </componentList> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
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changeset
|
109 <softwareRef ref="Xcalibur"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
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|
110 </instrumentConfiguration> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
111 </instrumentConfigurationList> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
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|
112 <dataProcessingList count="2"> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
113 <dataProcessing id="XcaliburProcessing"> |
|
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
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|
114 <processingMethod softwareRef="Xcalibur" order="1"> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
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|
115 <cvParam cvRef="MS" accession="MS:1000594" name="low intensity data point removal"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
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116 </processingMethod> |
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
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117 </dataProcessing> |
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
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118 <dataProcessing id="TMCConversion"> |
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
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119 <processingMethod softwareRef="TMC" order="2"> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
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120 <cvParam cvRef="MS" accession="MS:1000544" name="Conversion to mzML"/> |
|
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
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121 </processingMethod> |
|
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
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122 </dataProcessing> |
|
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
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123 </dataProcessingList> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
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124 <run defaultInstrumentConfigurationRef="LTQFTUltra0" defaultSourceFileRef="sf1" id="Experiment01" sampleRef="sample1" startTimeStamp="2009-08-11T15:59:44"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
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125 <spectrumList count="9" defaultDataProcessingRef="XcaliburProcessing"> |
|
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
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|
126 <spectrum id="Scan=1" defaultArrayLength="0" dataProcessingRef="XcaliburProcessing" sourceFileRef="sf1" index="0"> |
|
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
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127 <referenceableParamGroupRef ref="spectrum1"/> |
|
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
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changeset
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128 <cvParam cvRef="MS" accession="MS:1000285" name="total ion current" value="121.85039039868471"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
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129 <scanList count="1"> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
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130 <cvParam cvRef="MS" accession="MS:1000795" name="no combination"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
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131 <scan instrumentConfigurationRef="LTQFTUltra0"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
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changeset
|
132 <referenceableParamGroupRef ref="scan1"/> |
|
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
133 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="1"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
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134 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="1"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
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135 </scan> |
|
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
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136 </scanList> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
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137 <binaryDataArrayList count="2"> |
|
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
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138 <binaryDataArray encodedLength="0"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
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139 <referenceableParamGroupRef ref="mzArray"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
140 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
141 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
142 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
143 <binary /> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
144 </binaryDataArray> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
145 <binaryDataArray encodedLength="0"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
146 <referenceableParamGroupRef ref="intensityArray"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
147 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
148 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="33612"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
149 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
150 <binary /> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
151 </binaryDataArray> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
152 </binaryDataArrayList> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
153 </spectrum> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
154 <spectrum id="Scan=2" defaultArrayLength="0" dataProcessingRef="XcaliburProcessing" sourceFileRef="sf1" index="1"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
155 <referenceableParamGroupRef ref="spectrum1"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
156 <cvParam cvRef="MS" accession="MS:1000285" name="total ion current" value="182.31835420101888"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
157 <scanList count="1"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
158 <cvParam cvRef="MS" accession="MS:1000795" name="no combination"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
159 <scan instrumentConfigurationRef="LTQFTUltra0"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
160 <referenceableParamGroupRef ref="scan1"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
161 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="2"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
162 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="1"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
163 </scan> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
164 </scanList> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
165 <binaryDataArrayList count="2"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
166 <binaryDataArray encodedLength="0"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
167 <referenceableParamGroupRef ref="mzArray"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
168 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
169 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="67208"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
170 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
171 <binary /> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
172 </binaryDataArray> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
173 <binaryDataArray encodedLength="0"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
174 <referenceableParamGroupRef ref="intensityArray"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
175 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
176 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="100804"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
177 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
178 <binary /> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
179 </binaryDataArray> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
180 </binaryDataArrayList> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
181 </spectrum> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
182 <spectrum id="Scan=3" defaultArrayLength="0" dataProcessingRef="XcaliburProcessing" sourceFileRef="sf1" index="2"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
183 <referenceableParamGroupRef ref="spectrum1"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
184 <cvParam cvRef="MS" accession="MS:1000285" name="total ion current" value="161.8091904482675"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
185 <scanList count="1"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
186 <cvParam cvRef="MS" accession="MS:1000795" name="no combination"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
187 <scan instrumentConfigurationRef="LTQFTUltra0"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
188 <referenceableParamGroupRef ref="scan1"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
189 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="3"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
190 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="1"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
191 </scan> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
192 </scanList> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
193 <binaryDataArrayList count="2"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
194 <binaryDataArray encodedLength="0"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
195 <referenceableParamGroupRef ref="mzArray"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
196 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
197 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="134400"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
198 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
199 <binary /> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
200 </binaryDataArray> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
201 <binaryDataArray encodedLength="0"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
202 <referenceableParamGroupRef ref="intensityArray"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
203 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
204 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="167996"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
205 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
206 <binary /> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
207 </binaryDataArray> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
208 </binaryDataArrayList> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
209 </spectrum> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
210 <spectrum id="Scan=4" defaultArrayLength="0" dataProcessingRef="XcaliburProcessing" sourceFileRef="sf1" index="3"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
211 <referenceableParamGroupRef ref="spectrum1"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
212 <cvParam cvRef="MS" accession="MS:1000285" name="total ion current" value="200.9633277092539"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
213 <scanList count="1"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
214 <cvParam cvRef="MS" accession="MS:1000795" name="no combination"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
215 <scan instrumentConfigurationRef="LTQFTUltra0"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
216 <referenceableParamGroupRef ref="scan1"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
217 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="1"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
218 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="2"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
219 </scan> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
220 </scanList> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
221 <binaryDataArrayList count="2"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
222 <binaryDataArray encodedLength="0"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
223 <referenceableParamGroupRef ref="mzArray"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
224 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
225 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="201592"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
226 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
227 <binary /> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
228 </binaryDataArray> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
229 <binaryDataArray encodedLength="0"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
230 <referenceableParamGroupRef ref="intensityArray"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
231 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
232 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="235188"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
233 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
234 <binary /> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
235 </binaryDataArray> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
236 </binaryDataArrayList> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
237 </spectrum> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
238 <spectrum id="Scan=5" defaultArrayLength="0" dataProcessingRef="XcaliburProcessing" sourceFileRef="sf1" index="4"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
239 <referenceableParamGroupRef ref="spectrum1"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
240 <cvParam cvRef="MS" accession="MS:1000285" name="total ion current" value="135.30584173158496"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
241 <scanList count="1"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
242 <cvParam cvRef="MS" accession="MS:1000795" name="no combination"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
243 <scan instrumentConfigurationRef="LTQFTUltra0"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
244 <referenceableParamGroupRef ref="scan1"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
245 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="2"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
246 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="2"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
247 </scan> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
248 </scanList> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
249 <binaryDataArrayList count="2"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
250 <binaryDataArray encodedLength="0"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
251 <referenceableParamGroupRef ref="mzArray"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
252 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
253 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="268784"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
254 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
255 <binary /> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
256 </binaryDataArray> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
257 <binaryDataArray encodedLength="0"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
258 <referenceableParamGroupRef ref="intensityArray"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
259 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
260 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="302380"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
261 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
262 <binary /> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
263 </binaryDataArray> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
264 </binaryDataArrayList> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
265 </spectrum> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
266 <spectrum id="Scan=6" defaultArrayLength="0" dataProcessingRef="XcaliburProcessing" sourceFileRef="sf1" index="5"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
267 <referenceableParamGroupRef ref="spectrum1"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
268 <cvParam cvRef="MS" accession="MS:1000285" name="total ion current" value="108.39597418421639"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
269 <scanList count="1"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
270 <cvParam cvRef="MS" accession="MS:1000795" name="no combination"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
271 <scan instrumentConfigurationRef="LTQFTUltra0"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
272 <referenceableParamGroupRef ref="scan1"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
273 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="3"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
274 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="2"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
275 </scan> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
276 </scanList> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
277 <binaryDataArrayList count="2"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
278 <binaryDataArray encodedLength="0"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
279 <referenceableParamGroupRef ref="mzArray"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
280 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
281 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="335976"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
282 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
283 <binary /> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
284 </binaryDataArray> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
285 <binaryDataArray encodedLength="0"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
286 <referenceableParamGroupRef ref="intensityArray"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
287 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
288 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="369572"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
289 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
290 <binary /> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
291 </binaryDataArray> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
292 </binaryDataArrayList> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
293 </spectrum> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
294 <spectrum id="Scan=7" defaultArrayLength="0" dataProcessingRef="XcaliburProcessing" sourceFileRef="sf1" index="6"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
295 <referenceableParamGroupRef ref="spectrum1"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
296 <cvParam cvRef="MS" accession="MS:1000285" name="total ion current" value="127.84664447846832"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
297 <scanList count="1"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
298 <cvParam cvRef="MS" accession="MS:1000795" name="no combination"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
299 <scan instrumentConfigurationRef="LTQFTUltra0"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
300 <referenceableParamGroupRef ref="scan1"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
301 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="1"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
302 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="3"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
303 </scan> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
304 </scanList> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
305 <binaryDataArrayList count="2"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
306 <binaryDataArray encodedLength="0"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
307 <referenceableParamGroupRef ref="mzArray"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
308 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
309 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="403168"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
310 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
311 <binary /> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
312 </binaryDataArray> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
313 <binaryDataArray encodedLength="0"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
314 <referenceableParamGroupRef ref="intensityArray"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
315 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
316 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="436764"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
317 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
318 <binary /> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
319 </binaryDataArray> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
320 </binaryDataArrayList> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
321 </spectrum> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
322 <spectrum id="Scan=8" defaultArrayLength="0" dataProcessingRef="XcaliburProcessing" sourceFileRef="sf1" index="7"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
323 <referenceableParamGroupRef ref="spectrum1"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
324 <cvParam cvRef="MS" accession="MS:1000285" name="total ion current" value="168.27018147522492"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
325 <scanList count="1"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
326 <cvParam cvRef="MS" accession="MS:1000795" name="no combination"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
327 <scan instrumentConfigurationRef="LTQFTUltra0"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
328 <referenceableParamGroupRef ref="scan1"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
329 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="2"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
330 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="3"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
331 </scan> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
332 </scanList> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
333 <binaryDataArrayList count="2"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
334 <binaryDataArray encodedLength="0"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
335 <referenceableParamGroupRef ref="mzArray"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
336 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
337 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="470360"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
338 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
339 <binary /> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
340 </binaryDataArray> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
341 <binaryDataArray encodedLength="0"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
342 <referenceableParamGroupRef ref="intensityArray"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
343 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
344 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="503956"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
345 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
346 <binary /> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
347 </binaryDataArray> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
348 </binaryDataArrayList> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
349 </spectrum> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
350 <spectrum id="Scan=9" defaultArrayLength="0" dataProcessingRef="XcaliburProcessing" sourceFileRef="sf1" index="8"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
351 <referenceableParamGroupRef ref="spectrum1"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
352 <cvParam cvRef="MS" accession="MS:1000285" name="total ion current" value="243.5395066031077"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
353 <scanList count="1"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
354 <cvParam cvRef="MS" accession="MS:1000795" name="no combination"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
355 <scan instrumentConfigurationRef="LTQFTUltra0"> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
356 <referenceableParamGroupRef ref="scan1"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
357 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="3"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
358 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="3"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
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359 </scan> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
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360 </scanList> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
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361 <binaryDataArrayList count="2"> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
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362 <binaryDataArray encodedLength="0"> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
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363 <referenceableParamGroupRef ref="mzArray"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
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364 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
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365 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="537552"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
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366 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596"/> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
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367 <binary /> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
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368 </binaryDataArray> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
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369 <binaryDataArray encodedLength="0"> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
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370 <referenceableParamGroupRef ref="intensityArray"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
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371 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
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372 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="571148"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
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373 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596"/> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
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374 <binary /> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
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375 </binaryDataArray> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
376 </binaryDataArrayList> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
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377 </spectrum> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
|
378 </spectrumList> |
|
160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
changeset
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379 </run> |
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160538a890a6
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit f1e1cd260ef2884d0ba12e2b614df3c72d0934dc
galaxyp
parents:
diff
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|
380 </mzML> |