Mercurial > repos > galaxyp > maxquant

annotate build_mods_loc.py @ 0:d4b6c9eae635 draft

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Initial commit.
author galaxyp
date Fri, 10 May 2013 17:22:51 -0400
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1 #!/usr/bin/env python
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2
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3 import xml.etree.ElementTree as ET
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4 from os.path import exists
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5
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6 mods_path = "extended_modifications.xml"
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7
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8 if not exists(mods_path):
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9 mods_path = "modifications.xml"
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10
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11 tree = ET.parse(mods_path)
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12 modifications_el = tree.getroot()
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13
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14 with open("maxquant_mods.loc", "w") as output:
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15 for mod in modifications_el.getchildren():
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16 if mod.find("type").text.strip() == "standard":
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17 output.write("%s\n" % mod.attrib["title"])