Mercurial > repos > galaxyp > maxquant
diff README.md @ 0:d4b6c9eae635 draft
Initial commit.
author | galaxyp |
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date | Fri, 10 May 2013 17:22:51 -0400 |
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children | 8bac3cc5c5de |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/README.md Fri May 10 17:22:51 2013 -0400 @@ -0,0 +1,34 @@ +Tool wrapper for MaxQuant. + +MaxQuant is a Windows only program and so you will likely need to +deploy this tool to run on a remote Windows system via the LWR +(https://lwr.readthedocs.org). + +The sample mods file maxquant_mods.loc.sample corresponds to the +default modifications MaxQuant is configured with. The Galaxy-P +project uses a MaxQuant that has been extended with all of Unimod. To +modify MaxQuant in this fashion replace MaxQuant's modifications.xml +file with the extended_modifications.xml distributed with this tool +and configure Galaxy with the maxquant_mods.loc.sample.extended loc +file.# Obtaining Tools + +Repositories for all Galaxy-P tools can be found at +https:/bitbucket.org/galaxyp/. + +# Contact + +Please send suggestions for improvements and bug reports to +jmchilton@gmail.com. + +# License + +All Galaxy-P tools are licensed under the Apache License Version 2.0 +unless otherwise documented. + +# Tool Versioning + +Galaxy-P tools will have versions of the form X.Y.Z. Versions +differing only after the second decimal should be completely +compatible with each other. Breaking changes should result in an +increment of the number before and/or after the first decimal. All +tools of version less than 1.0.0 should be considered beta.