--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/README_REPO.md	Wed Dec 19 00:27:24 2012 -0500
@@ -0,0 +1,22 @@
+# ms2preproc
+
+This repository contains a tool wrapper for ms2preproc.
+
+http://hci.iwr.uni-heidelberg.de/MIP/Software/ms2preproc.php
+
+This tool requires Galaxy to be equipped with common proteomic
+datatypes. These can be obtained by installing Ira Cooke's ProtK via
+the tool shed or merging the changesets from the following repository
+into your Galaxy instance:
+
+     https://bitbucket.org/galaxyp/galaxy-dist-proteomics
+
+# Installing
+
+This tool wrapper requires ms2preproc to be installed. 
+
+For Galaxy-P we are installing this tool via CloudBioLinux
+(https://github.com/jmchilton/cloudbiolinux/blob/proteomics/cloudbio/custom/bio_proteomics.py). While
+this fabric script may not be exactly appropriate for your environment
+it may serve as a template for how to install this software.
+