Mercurial > repos > galaxyp > msconvert_nix
diff test-data/small-peakpicking-cwt-allMS.mzML @ 1:7016f1f10f42 draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msconvert commit d56659dd48f8c554a832787e71aca6ae65c90848
| author | galaxyp |
|---|---|
| date | Tue, 14 Mar 2017 16:45:30 -0400 |
| parents | baa6c072fccc |
| children |
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--- a/test-data/small-peakpicking-cwt-allMS.mzML Fri Apr 08 16:08:09 2016 -0400 +++ b/test-data/small-peakpicking-cwt-allMS.mzML Tue Mar 14 16:45:30 2017 -0400 @@ -2,7 +2,7 @@ <indexedmzML xmlns="http://psi.hupo.org/ms/mzml" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psi.hupo.org/ms/mzml http://psidev.info/files/ms/mzML/xsd/mzML1.1.2_idx.xsd"> <mzML xmlns="http://psi.hupo.org/ms/mzml" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psi.hupo.org/ms/mzml http://psidev.info/files/ms/mzML/xsd/mzML1.1.0.xsd" id="small" version="1.1.0"> <cvList count="2"> - <cv id="MS" fullName="Proteomics Standards Initiative Mass Spectrometry Ontology" version="3.79.0" URI="http://psidev.cvs.sourceforge.net/*checkout*/psidev/psi/psi-ms/mzML/controlledVocabulary/psi-ms.obo"/> + <cv id="MS" fullName="Proteomics Standards Initiative Mass Spectrometry Ontology" version="4.0.1" URI="http://psidev.cvs.sourceforge.net/*checkout*/psidev/psi/psi-ms/mzML/controlledVocabulary/psi-ms.obo"/> <cv id="UO" fullName="Unit Ontology" version="12:10:2011" URI="http://obo.cvs.sourceforge.net/*checkout*/obo/obo/ontology/phenotype/unit.obo"/> </cvList> <fileDescription> @@ -34,7 +34,7 @@ <software id="pwiz" version="3.0.8981"> <cvParam cvRef="MS" accession="MS:1000615" name="ProteoWizard software" value=""/> </software> - <software id="pwiz_3.0.8990" version="3.0.8990"> + <software id="pwiz_3.0.9987" version="3.0.9987"> <cvParam cvRef="MS" accession="MS:1000615" name="ProteoWizard software" value=""/> </software> </softwareList> @@ -79,10 +79,10 @@ </processingMethod> </dataProcessing> <dataProcessing id="pwiz_Reader_conversion"> - <processingMethod order="0" softwareRef="pwiz_3.0.8990"> + <processingMethod order="0" softwareRef="pwiz_3.0.9987"> <cvParam cvRef="MS" accession="MS:1000544" name="Conversion to mzML" value=""/> </processingMethod> - <processingMethod order="1" softwareRef="pwiz_3.0.8990"> + <processingMethod order="1" softwareRef="pwiz_3.0.9987"> <cvParam cvRef="MS" accession="MS:1000035" name="peak picking" value=""/> </processingMethod> </dataProcessing> @@ -1269,7 +1269,7 @@ </binaryDataArray> </binaryDataArrayList> </spectrum> - <spectrum index="22" id="controllerType=0 controllerNumber=1 scan=23" defaultArrayLength="701" dataProcessingRef="pwiz_Reader_conversion"> + <spectrum index="22" id="controllerType=0 controllerNumber=1 scan=23" defaultArrayLength="700" dataProcessingRef="pwiz_Reader_conversion"> <cvParam cvRef="MS" accession="MS:1000579" name="MS1 spectrum" value=""/> <cvParam cvRef="MS" accession="MS:1000511" name="ms level" value="1"/> <cvParam cvRef="MS" accession="MS:1000130" name="positive scan" value=""/> @@ -1295,17 +1295,17 @@ </scan> </scanList> <binaryDataArrayList count="2"> - <binaryDataArray encodedLength="4352"> + <binaryDataArray encodedLength="4344"> <cvParam cvRef="MS" accession="MS:1000523" name="64-bit float" 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