annotate test-data/201208-378803-msgf-2mmu-tryptic-many_mods.mzid @ 0:ee56530a559f draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
author galaxyp
date Sun, 21 Feb 2016 11:04:06 -0500
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1 <?xml version="1.0" encoding="UTF-8"?>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2 <MzIdentML id="MS-GF+" version="1.1.0" xmlns="http://psidev.info/psi/pi/mzIdentML/1.1" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psidev.info/psi/pi/mzIdentML/1.1 http://www.psidev.info/files/mzIdentML1.1.0.xsd" creationDate="2015-11-09T22:47:09" >
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3 <cvList xmlns="http://psidev.info/psi/pi/mzIdentML/1.1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
4 <cv id="PSI-MS" uri="http://psidev.cvs.sourceforge.net/viewvc/*checkout*/psidev/psi/psi-ms/mzML/controlledVocabulary/psi-ms.obo" version="3.30.0" fullName="PSI-MS"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
5 <cv id="UNIMOD" uri="http://www.unimod.org/obo/unimod.obo" fullName="UNIMOD"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
6 <cv id="UO" uri="http://obo.cvs.sourceforge.net/*checkout*/obo/obo/ontology/phenotype/unit.obo" fullName="UNIT-ONTOLOGY"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
7 </cvList>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
8 <AnalysisSoftwareList xmlns="http://psidev.info/psi/pi/mzIdentML/1.1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
9 <AnalysisSoftware version="Beta (v10089)" name="MS-GF+" id="ID_software">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
10 <SoftwareName>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
11 <cvParam accession="MS:1002048" cvRef="PSI-MS" name="MS-GF+"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
12 </SoftwareName>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
13 </AnalysisSoftware>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
14 </AnalysisSoftwareList>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
15 <SequenceCollection xmlns="http://psidev.info/psi/pi/mzIdentML/1.1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
16 <DBSequence accession="gi|30794280|ref|NP_851335.1|" searchDatabase_ref="SearchDB_1" length="607" id="DBSeq43937">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
17 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|30794280|ref|NP_851335.1| serum albumin precursor [Bos taurus]" name="protein description"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
18 </DBSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
19 <DBSequence accession="XXX_gi|528944676|ref|XP_005204734.1|" searchDatabase_ref="SearchDB_1" length="7610" id="DBSeq65480"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
20 <DBSequence accession="gi|528968104|ref|XP_005212567.1|" searchDatabase_ref="SearchDB_1" length="815" id="DBSeq27657">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
21 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528968104|ref|XP_005212567.1| PREDICTED: exocyst complex component 6B isoform X1 [Bos taurus]" name="protein description"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
22 </DBSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
23 <DBSequence accession="gi|528968106|ref|XP_005212568.1|" searchDatabase_ref="SearchDB_1" length="811" id="DBSeq28473">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
24 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528968106|ref|XP_005212568.1| PREDICTED: exocyst complex component 6B isoform X2 [Bos taurus]" name="protein description"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
25 </DBSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
26 <DBSequence accession="gi|528968108|ref|XP_005212569.1|" searchDatabase_ref="SearchDB_1" length="766" id="DBSeq29285">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
27 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528968108|ref|XP_005212569.1| PREDICTED: exocyst complex component 6B isoform X3 [Bos taurus]" name="protein description"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
28 </DBSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
29 <DBSequence accession="gi|115497338|ref|NP_001069884.1|" searchDatabase_ref="SearchDB_1" length="626" id="DBSeq37511">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
30 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|115497338|ref|NP_001069884.1| exocyst complex component 6B [Bos taurus]" name="protein description"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
31 </DBSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
32 <DBSequence accession="XXX_gi|358418103|ref|XP_600387.4|" searchDatabase_ref="SearchDB_1" length="854" id="DBSeq63026"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
33 <DBSequence accession="XXX_gi|528923273|ref|XP_005196452.1|" searchDatabase_ref="SearchDB_1" length="854" id="DBSeq63881"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
34 <DBSequence accession="XXX_gi|297488451|ref|XP_002696970.1|" searchDatabase_ref="SearchDB_1" length="854" id="DBSeq91148"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
35 <DBSequence accession="XXX_gi|529000951|ref|XP_005222651.1|" searchDatabase_ref="SearchDB_1" length="854" id="DBSeq92003"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
36 <DBSequence accession="XXX_gi|358414198|ref|XP_002700672.2|" searchDatabase_ref="SearchDB_1" length="1099" id="DBSeq104353"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
37 <DBSequence accession="XXX_gi|528966552|ref|XP_005211956.1|" searchDatabase_ref="SearchDB_1" length="1131" id="DBSeq107227"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
38 <DBSequence accession="XXX_gi|528966554|ref|XP_005211957.1|" searchDatabase_ref="SearchDB_1" length="1099" id="DBSeq108359"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
39 <DBSequence accession="XXX_gi|297479727|ref|XP_002690982.1|" searchDatabase_ref="SearchDB_1" length="1099" id="DBSeq109459"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
40 <DBSequence accession="gi|358414198|ref|XP_002700672.2|" searchDatabase_ref="SearchDB_1" length="1099" id="DBSeq48378">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
41 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|358414198|ref|XP_002700672.2| PREDICTED: LOW QUALITY PROTEIN: solute carrier family 12 member 1 [Bos taurus]" name="protein description"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
42 </DBSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
43 <DBSequence accession="gi|528966552|ref|XP_005211956.1|" searchDatabase_ref="SearchDB_1" length="1131" id="DBSeq51252">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
44 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528966552|ref|XP_005211956.1| PREDICTED: solute carrier family 12 member 1 isoform X2 [Bos taurus]" name="protein description"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
45 </DBSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
46 <DBSequence accession="gi|528966554|ref|XP_005211957.1|" searchDatabase_ref="SearchDB_1" length="1099" id="DBSeq52384">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
47 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528966554|ref|XP_005211957.1| PREDICTED: solute carrier family 12 member 1 isoform X3 [Bos taurus]" name="protein description"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
48 </DBSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
49 <DBSequence accession="gi|297479727|ref|XP_002690982.1|" searchDatabase_ref="SearchDB_1" length="1099" id="DBSeq53484">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
50 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|297479727|ref|XP_002690982.1| PREDICTED: solute carrier family 12 member 1 isoform X1 [Bos taurus]" name="protein description"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
51 </DBSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
52 <DBSequence accession="XXX_gi|528928354|ref|XP_005193233.1|" searchDatabase_ref="SearchDB_1" length="588" id="DBSeq64736"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
53 <DBSequence accession="gi|528928354|ref|XP_005193233.1|" searchDatabase_ref="SearchDB_1" length="588" id="DBSeq8761">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
54 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528928354|ref|XP_005193233.1| PREDICTED: fibrous sheath-interacting protein 2-like [Bos taurus]" name="protein description"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
55 </DBSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
56 <DBSequence accession="XXX_gi|528944678|ref|XP_005204735.1|" searchDatabase_ref="SearchDB_1" length="5498" id="DBSeq73091"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
57 <DBSequence accession="XXX_gi|219804516|ref|NP_001137332.1|" searchDatabase_ref="SearchDB_1" length="5422" id="DBSeq94489"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
58 <DBSequence accession="gi|528944676|ref|XP_005204734.1|" searchDatabase_ref="SearchDB_1" length="7610" id="DBSeq9505">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
59 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528944676|ref|XP_005204734.1| PREDICTED: microtubule-actin cross-linking factor 1 isoform X1 [Bos taurus]" name="protein description"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
60 </DBSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
61 <DBSequence accession="gi|528944678|ref|XP_005204735.1|" searchDatabase_ref="SearchDB_1" length="5498" id="DBSeq17116">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
62 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528944678|ref|XP_005204735.1| PREDICTED: microtubule-actin cross-linking factor 1 isoform X2 [Bos taurus]" name="protein description"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
63 </DBSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
64 <DBSequence accession="gi|219804516|ref|NP_001137332.1|" searchDatabase_ref="SearchDB_1" length="5422" id="DBSeq38514">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
65 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|219804516|ref|NP_001137332.1| microtubule-actin cross-linking factor 1 [Bos taurus]" name="protein description"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
66 </DBSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
67 <DBSequence accession="gi|528953238|ref|XP_005208082.1|" searchDatabase_ref="SearchDB_1" length="206" id="DBSeq23283">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
68 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528953238|ref|XP_005208082.1| PREDICTED: alpha-S1-casein isoform X3 [Bos taurus]" name="protein description"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
69 </DBSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
70 <DBSequence accession="XXX_gi|528953240|ref|XP_005208083.1|" searchDatabase_ref="SearchDB_1" length="206" id="DBSeq79465"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
71 <DBSequence accession="gi|27806963|ref|NP_776953.1|" searchDatabase_ref="SearchDB_1" length="222" id="DBSeq46622">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
72 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|27806963|ref|NP_776953.1| alpha-S2-casein precursor [Bos taurus]" name="protein description"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
73 </DBSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
74 <DBSequence accession="XXX_gi|528993971|ref|XP_005219929.1|" searchDatabase_ref="SearchDB_1" length="768" id="DBSeq87068"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
75 <DBSequence accession="XXX_gi|528993973|ref|XP_005219930.1|" searchDatabase_ref="SearchDB_1" length="712" id="DBSeq87837"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
76 <DBSequence accession="XXX_gi|528993975|ref|XP_005219931.1|" searchDatabase_ref="SearchDB_1" length="685" id="DBSeq88550"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
77 <DBSequence accession="XXX_gi|27806851|ref|NP_776358.1|" searchDatabase_ref="SearchDB_1" length="712" id="DBSeq103640"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
78 <DBSequence accession="gi|528993971|ref|XP_005219929.1|" searchDatabase_ref="SearchDB_1" length="768" id="DBSeq31093">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
79 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528993971|ref|XP_005219929.1| PREDICTED: lactoperoxidase isoform X1 [Bos taurus]" name="protein description"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
80 </DBSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
81 <DBSequence accession="gi|528993973|ref|XP_005219930.1|" searchDatabase_ref="SearchDB_1" length="712" id="DBSeq31862">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
82 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528993973|ref|XP_005219930.1| PREDICTED: lactoperoxidase isoform X2 [Bos taurus]" name="protein description"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
83 </DBSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
84 <DBSequence accession="gi|27806851|ref|NP_776358.1|" searchDatabase_ref="SearchDB_1" length="712" id="DBSeq47665">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
85 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|27806851|ref|NP_776358.1| lactoperoxidase precursor [Bos taurus]" name="protein description"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
86 </DBSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
87 <DBSequence accession="XXX_gi|528968106|ref|XP_005212568.1|" searchDatabase_ref="SearchDB_1" length="811" id="DBSeq84448"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
88 <DBSequence accession="XXX_gi|528954392|ref|XP_005208526.1|" searchDatabase_ref="SearchDB_1" length="128" id="DBSeq79850"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
89 <DBSequence accession="XXX_gi|115496708|ref|NP_001069831.1|" searchDatabase_ref="SearchDB_1" length="128" id="DBSeq102315"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
90 <DBSequence accession="gi|528954392|ref|XP_005208526.1|" searchDatabase_ref="SearchDB_1" length="128" id="DBSeq23875">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
91 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528954392|ref|XP_005208526.1| PREDICTED: ubiquitin-60S ribosomal protein L40 isoform X1 [Bos taurus]" name="protein description"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
92 </DBSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
93 <DBSequence accession="gi|115496708|ref|NP_001069831.1|" searchDatabase_ref="SearchDB_1" length="128" id="DBSeq46340">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
94 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|115496708|ref|NP_001069831.1| ubiquitin-60S ribosomal protein L40 [Bos taurus]" name="protein description"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
95 </DBSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
96 <DBSequence accession="XXX_gi|30794280|ref|NP_851335.1|" searchDatabase_ref="SearchDB_1" length="607" id="DBSeq99912"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
97 <DBSequence accession="XXX_gi|528953238|ref|XP_005208082.1|" searchDatabase_ref="SearchDB_1" length="206" id="DBSeq79258"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
98 <DBSequence accession="XXX_gi|528968104|ref|XP_005212567.1|" searchDatabase_ref="SearchDB_1" length="815" id="DBSeq83632"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
99 <DBSequence accession="XXX_gi|528968108|ref|XP_005212569.1|" searchDatabase_ref="SearchDB_1" length="766" id="DBSeq85260"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
100 <DBSequence accession="XXX_gi|115497338|ref|NP_001069884.1|" searchDatabase_ref="SearchDB_1" length="626" id="DBSeq93486"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
101 <DBSequence accession="gi|528908812|ref|XP_609847.5|" searchDatabase_ref="SearchDB_1" length="588" id="DBSeq3312">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
102 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528908812|ref|XP_609847.5| PREDICTED: zinc finger protein 169 isoform X6 [Bos taurus]" name="protein description"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
103 </DBSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
104 <DBSequence accession="gi|528959657|ref|XP_002689899.2|" searchDatabase_ref="SearchDB_1" length="588" id="DBSeq27068">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
105 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528959657|ref|XP_002689899.2| PREDICTED: zinc finger protein 169 isoform X1 [Bos taurus]" name="protein description"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
106 </DBSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
107 <DBSequence accession="gi|528918160|ref|XP_005195085.1|" searchDatabase_ref="SearchDB_1" length="77" id="DBSeq3901">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
108 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528918160|ref|XP_005195085.1| PREDICTED: polyubiquitin-B-like [Bos taurus]" name="protein description"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
109 </DBSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
110 <DBSequence accession="gi|528988998|ref|XP_005218033.1|" searchDatabase_ref="SearchDB_1" length="77" id="DBSeq30388">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
111 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528988998|ref|XP_005218033.1| PREDICTED: polyubiquitin-B-like [Bos taurus]" name="protein description"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
112 </DBSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
113 <DBSequence accession="gi|528995061|ref|XP_005220351.1|" searchDatabase_ref="SearchDB_1" length="305" id="DBSeq33261">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
114 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528995061|ref|XP_005220351.1| PREDICTED: polyubiquitin-B isoform X1 [Bos taurus]" name="protein description"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
115 </DBSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
116 <DBSequence accession="gi|528995063|ref|XP_005220352.1|" searchDatabase_ref="SearchDB_1" length="305" id="DBSeq33567">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
117 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|528995063|ref|XP_005220352.1| PREDICTED: polyubiquitin-B isoform X2 [Bos taurus]" name="protein description"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
118 </DBSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
119 <DBSequence accession="gi|27806505|ref|NP_776558.1|" searchDatabase_ref="SearchDB_1" length="305" id="DBSeq44545">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
120 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|27806505|ref|NP_776558.1| polyubiquitin-B [Bos taurus]" name="protein description"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
121 </DBSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
122 <DBSequence accession="XXX_gi|528995061|ref|XP_005220351.1|" searchDatabase_ref="SearchDB_1" length="305" id="DBSeq89236"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
123 <DBSequence accession="XXX_gi|528995063|ref|XP_005220352.1|" searchDatabase_ref="SearchDB_1" length="305" id="DBSeq89542"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
124 <DBSequence accession="XXX_gi|27806505|ref|NP_776558.1|" searchDatabase_ref="SearchDB_1" length="305" id="DBSeq100520"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
125 <DBSequence accession="XXX_gi|329665078|ref|NP_001193236.1|" searchDatabase_ref="SearchDB_1" length="690" id="DBSeq101624"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
126 <DBSequence accession="gi|329665078|ref|NP_001193236.1|" searchDatabase_ref="SearchDB_1" length="690" id="DBSeq45649">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
127 <cvParam accession="MS:1001088" cvRef="PSI-MS" value="gi|329665078|ref|NP_001193236.1| polyubiquitin-C [Bos taurus]" name="protein description"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
128 </DBSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
129 <Peptide id="Pep1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
130 <PeptideSequence>PDPNTLCDEFKADEKKFWGK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
131 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
132 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
133 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
134 <Modification monoisotopicMassDelta="57.021463735" location="7">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
135 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
136 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
137 <Modification monoisotopicMassDelta="343.03178476" location="7">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
138 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
139 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
140 <Modification monoisotopicMassDelta="144.102063" location="11">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
141 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
142 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
143 <Modification monoisotopicMassDelta="144.102063" location="15">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
144 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
145 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
146 <Modification monoisotopicMassDelta="144.102063" location="16">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
147 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
148 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
149 <Modification monoisotopicMassDelta="144.102063" location="20">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
150 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
151 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
152 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
153 <Peptide id="Pep2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
154 <PeptideSequence>EIAEAVSLPGK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
155 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
156 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
157 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
158 <Modification monoisotopicMassDelta="343.03178476" location="7">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
159 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
160 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
161 <Modification monoisotopicMassDelta="144.102063" location="11">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
162 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
163 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
164 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
165 <Peptide id="Pep3">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
166 <PeptideSequence>QPFPKKFPFSEFVPK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
167 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
168 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
169 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
170 <Modification monoisotopicMassDelta="-17.026549105" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
171 <cvParam accession="UNIMOD:28" cvRef="UNIMOD" name="Gln-&gt;pyro-Glu"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
172 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
173 <Modification monoisotopicMassDelta="144.102063" location="5">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
174 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
175 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
176 <Modification monoisotopicMassDelta="144.102063" location="6">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
177 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
178 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
179 <Modification monoisotopicMassDelta="343.03178476" location="10">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
180 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
181 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
182 <Modification monoisotopicMassDelta="144.102063" location="15">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
183 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
184 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
185 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
186 <Peptide id="Pep4">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
187 <PeptideSequence>ESMKRALEYLRNRRK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
188 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
189 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
190 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
191 <Modification monoisotopicMassDelta="343.03178476" location="2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
192 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
193 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
194 <Modification monoisotopicMassDelta="144.102063" location="4">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
195 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
196 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
197 <Modification monoisotopicMassDelta="144.102063" location="15">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
198 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
199 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
200 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
201 <Peptide id="Pep5">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
202 <PeptideSequence>AMGSNMEKVCLK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
203 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
204 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
205 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
206 <Modification monoisotopicMassDelta="15.99491463" location="2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
207 <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
208 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
209 <Modification monoisotopicMassDelta="144.102063" location="8">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
210 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
211 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
212 <Modification monoisotopicMassDelta="57.021463735" location="10">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
213 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
214 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
215 <Modification monoisotopicMassDelta="343.03178476" location="10">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
216 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
217 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
218 <Modification monoisotopicMassDelta="144.102063" location="12">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
219 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
220 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
221 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
222 <Peptide id="Pep6">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
223 <PeptideSequence>LCVKEMNSGMAK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
224 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
225 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
226 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
227 <Modification monoisotopicMassDelta="57.021463735" location="2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
228 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
229 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
230 <Modification monoisotopicMassDelta="144.102063" location="4">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
231 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
232 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
233 <Modification monoisotopicMassDelta="15.99491463" location="6">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
234 <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
235 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
236 <Modification monoisotopicMassDelta="343.03178476" location="8">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
237 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
238 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
239 <Modification monoisotopicMassDelta="144.102063" location="12">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
240 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
241 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
242 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
243 <Peptide id="Pep7">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
244 <PeptideSequence>KLSHNSMLPK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
245 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
246 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
247 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
248 <Modification monoisotopicMassDelta="144.102063" location="1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
249 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
250 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
251 <Modification monoisotopicMassDelta="343.03178476" location="6">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
252 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
253 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
254 <Modification monoisotopicMassDelta="15.99491463" location="7">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
255 <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
256 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
257 <Modification monoisotopicMassDelta="144.102063" location="10">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
258 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
259 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
260 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
261 <Peptide id="Pep8">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
262 <PeptideSequence>PLMSNHSLKK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
263 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
264 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
265 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
266 <Modification monoisotopicMassDelta="15.99491463" location="3">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
267 <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
268 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
269 <Modification monoisotopicMassDelta="343.03178476" location="4">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
270 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
271 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
272 <Modification monoisotopicMassDelta="144.102063" location="9">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
273 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
274 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
275 <Modification monoisotopicMassDelta="144.102063" location="10">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
276 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
277 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
278 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
279 <Peptide id="Pep9">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
280 <PeptideSequence>RLYNWSILSK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
281 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
282 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
283 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
284 <Modification monoisotopicMassDelta="343.03178476" location="6">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
285 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
286 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
287 <Modification monoisotopicMassDelta="144.102063" location="10">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
288 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
289 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
290 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
291 <Peptide id="Pep10">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
292 <PeptideSequence>RLYNWSILSK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
293 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
294 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
295 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
296 <Modification monoisotopicMassDelta="343.03178476" location="9">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
297 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
298 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
299 <Modification monoisotopicMassDelta="144.102063" location="10">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
300 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
301 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
302 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
303 <Peptide id="Pep11">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
304 <PeptideSequence>RDDLLRQLLK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
305 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
306 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
307 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
308 <Modification monoisotopicMassDelta="144.102063" location="10">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
309 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
310 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
311 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
312 <Peptide id="Pep12">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
313 <PeptideSequence>LLQRLLDDRK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
314 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
315 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
316 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
317 <Modification monoisotopicMassDelta="144.102063" location="10">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
318 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
319 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
320 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
321 <Peptide id="Pep13">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
322 <PeptideSequence>NLNEWANNMEDISKKVEPK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
323 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
324 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
325 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
326 <Modification monoisotopicMassDelta="15.99491463" location="9">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
327 <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
328 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
329 <Modification monoisotopicMassDelta="343.03178476" location="13">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
330 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
331 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
332 <Modification monoisotopicMassDelta="144.102063" location="14">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
333 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
334 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
335 <Modification monoisotopicMassDelta="144.102063" location="15">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
336 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
337 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
338 <Modification monoisotopicMassDelta="144.102063" location="19">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
339 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
340 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
341 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
342 <Peptide id="Pep14">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
343 <PeptideSequence>PEVKKSIDEMNNAWENLNK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
344 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
345 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
346 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
347 <Modification monoisotopicMassDelta="144.102063" location="4">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
348 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
349 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
350 <Modification monoisotopicMassDelta="144.102063" location="5">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
351 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
352 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
353 <Modification monoisotopicMassDelta="343.03178476" location="6">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
354 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
355 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
356 <Modification monoisotopicMassDelta="15.99491463" location="10">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
357 <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
358 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
359 <Modification monoisotopicMassDelta="144.102063" location="19">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
360 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
361 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
362 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
363 <Peptide id="Pep15">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
364 <PeptideSequence>LVSDANEQYK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
365 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
366 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
367 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
368 <Modification monoisotopicMassDelta="343.03178476" location="3">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
369 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
370 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
371 <Modification monoisotopicMassDelta="144.102063" location="10">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
372 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
373 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
374 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
375 <Peptide id="Pep16">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
376 <PeptideSequence>YQENADSVLK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
377 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
378 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
379 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
380 <Modification monoisotopicMassDelta="343.03178476" location="7">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
381 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
382 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
383 <Modification monoisotopicMassDelta="144.102063" location="10">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
384 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
385 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
386 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
387 <Peptide id="Pep17">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
388 <PeptideSequence>QMEAESISSSEQKHIQK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
389 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
390 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
391 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
392 <Modification monoisotopicMassDelta="-17.026549105" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
393 <cvParam accession="UNIMOD:28" cvRef="UNIMOD" name="Gln-&gt;pyro-Glu"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
394 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
395 <Modification monoisotopicMassDelta="15.99491463" location="2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
396 <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
397 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
398 <Modification monoisotopicMassDelta="144.102063" location="13">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
399 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
400 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
401 <Modification monoisotopicMassDelta="144.102063" location="17">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
402 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
403 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
404 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
405 <Peptide id="Pep18">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
406 <PeptideSequence>QQAHIGEKMSHLRELQPVK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
407 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
408 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
409 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
410 <Modification monoisotopicMassDelta="-17.026549105" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
411 <cvParam accession="UNIMOD:28" cvRef="UNIMOD" name="Gln-&gt;pyro-Glu"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
412 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
413 <Modification monoisotopicMassDelta="144.102063" location="8">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
414 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
415 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
416 <Modification monoisotopicMassDelta="343.03178476" location="10">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
417 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
418 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
419 <Modification monoisotopicMassDelta="144.102063" location="19">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
420 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
421 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
422 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
423 <Peptide id="Pep19">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
424 <PeptideSequence>EDHELCLQRTFVNK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
425 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
426 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
427 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
428 <Modification monoisotopicMassDelta="57.021463735" location="6">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
429 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
430 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
431 <Modification monoisotopicMassDelta="343.03178476" location="6">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
432 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
433 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
434 <Modification monoisotopicMassDelta="144.102063" location="14">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
435 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
436 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
437 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
438 <Peptide id="Pep20">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
439 <PeptideSequence>QEKNMAINPSK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
440 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
441 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
442 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
443 <Modification monoisotopicMassDelta="-17.026549105" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
444 <cvParam accession="UNIMOD:28" cvRef="UNIMOD" name="Gln-&gt;pyro-Glu"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
445 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
446 <Modification monoisotopicMassDelta="144.102063" location="3">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
447 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
448 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
449 <Modification monoisotopicMassDelta="343.03178476" location="10">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
450 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
451 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
452 <Modification monoisotopicMassDelta="144.102063" location="11">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
453 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
454 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
455 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
456 <Peptide id="Pep21">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
457 <PeptideSequence>SFPQNPVELK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
458 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
459 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
460 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
461 <Modification monoisotopicMassDelta="343.03178476" location="1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
462 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
463 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
464 <Modification monoisotopicMassDelta="144.102063" location="10">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
465 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
466 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
467 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
468 <Peptide id="Pep22">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
469 <PeptideSequence>TRGPAALSEEK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
470 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
471 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
472 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
473 <Modification monoisotopicMassDelta="343.03178476" location="8">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
474 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
475 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
476 <Modification monoisotopicMassDelta="144.102063" location="11">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
477 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
478 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
479 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
480 <Peptide id="Pep23">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
481 <PeptideSequence>PFMIPFCNDGQICYEECQTK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
482 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
483 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
484 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
485 <Modification monoisotopicMassDelta="57.021463735" location="7">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
486 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
487 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
488 <Modification monoisotopicMassDelta="343.03178476" location="7">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
489 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
490 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
491 <Modification monoisotopicMassDelta="57.021463735" location="13">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
492 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
493 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
494 <Modification monoisotopicMassDelta="57.021463735" location="17">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
495 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
496 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
497 <Modification monoisotopicMassDelta="144.102063" location="20">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
498 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
499 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
500 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
501 <Peptide id="Pep24">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
502 <PeptideSequence>PFMIPFCNDGQICYEECQTK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
503 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
504 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
505 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
506 <Modification monoisotopicMassDelta="57.021463735" location="7">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
507 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
508 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
509 <Modification monoisotopicMassDelta="57.021463735" location="13">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
510 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
511 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
512 <Modification monoisotopicMassDelta="343.03178476" location="13">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
513 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
514 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
515 <Modification monoisotopicMassDelta="57.021463735" location="17">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
516 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
517 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
518 <Modification monoisotopicMassDelta="144.102063" location="20">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
519 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
520 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
521 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
522 <Peptide id="Pep25">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
523 <PeptideSequence>LHQEVCLCLQK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
524 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
525 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
526 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
527 <Modification monoisotopicMassDelta="57.021463735" location="6">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
528 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
529 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
530 <Modification monoisotopicMassDelta="343.03178476" location="6">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
531 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
532 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
533 <Modification monoisotopicMassDelta="57.021463735" location="8">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
534 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
535 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
536 <Modification monoisotopicMassDelta="343.03178476" location="8">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
537 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
538 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
539 <Modification monoisotopicMassDelta="144.102063" location="11">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
540 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
541 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
542 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
543 <Peptide id="Pep26">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
544 <PeptideSequence>QLCLCVEQHLK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
545 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
546 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
547 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
548 <Modification monoisotopicMassDelta="57.021463735" location="3">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
549 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
550 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
551 <Modification monoisotopicMassDelta="343.03178476" location="3">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
552 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
553 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
554 <Modification monoisotopicMassDelta="57.021463735" location="5">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
555 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
556 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
557 <Modification monoisotopicMassDelta="343.03178476" location="5">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
558 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
559 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
560 <Modification monoisotopicMassDelta="144.102063" location="11">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
561 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
562 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
563 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
564 <Peptide id="Pep27">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
565 <PeptideSequence>NEMAMCGSNVRQK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
566 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
567 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
568 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
569 <Modification monoisotopicMassDelta="15.99491463" location="3">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
570 <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
571 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
572 <Modification monoisotopicMassDelta="15.99491463" location="5">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
573 <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
574 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
575 <Modification monoisotopicMassDelta="57.021463735" location="6">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
576 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
577 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
578 <Modification monoisotopicMassDelta="144.102063" location="13">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
579 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
580 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
581 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
582 <Peptide id="Pep28">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
583 <PeptideSequence>QRVNSGCMAMENK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
584 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
585 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
586 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
587 <Modification monoisotopicMassDelta="57.021463735" location="7">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
588 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
589 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
590 <Modification monoisotopicMassDelta="15.99491463" location="8">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
591 <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
592 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
593 <Modification monoisotopicMassDelta="15.99491463" location="10">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
594 <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
595 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
596 <Modification monoisotopicMassDelta="144.102063" location="13">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
597 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
598 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
599 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
600 <Peptide id="Pep29">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
601 <PeptideSequence>GRTRTAIRNGQVWEESLK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
602 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
603 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
604 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
605 <Modification monoisotopicMassDelta="343.03178476" location="16">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
606 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
607 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
608 <Modification monoisotopicMassDelta="144.102063" location="18">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
609 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
610 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
611 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
612 <Peptide id="Pep30">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
613 <PeptideSequence>LPQGYHPNDVEEEWGK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
614 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
615 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
616 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
617 <Modification monoisotopicMassDelta="144.102063" location="16">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
618 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
619 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
620 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
621 <Peptide id="Pep31">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
622 <PeptideSequence>RFQAFMNNKRSTDKMK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
623 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
624 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
625 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
626 <Modification monoisotopicMassDelta="15.99491463" location="6">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
627 <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
628 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
629 <Modification monoisotopicMassDelta="144.102063" location="9">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
630 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
631 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
632 <Modification monoisotopicMassDelta="144.102063" location="14">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
633 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
634 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
635 <Modification monoisotopicMassDelta="15.99491463" location="15">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
636 <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
637 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
638 <Modification monoisotopicMassDelta="144.102063" location="16">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
639 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
640 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
641 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
642 <Peptide id="Pep32">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
643 <PeptideSequence>MKDTSRKNNMFAQFRK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
644 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
645 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
646 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
647 <Modification monoisotopicMassDelta="15.99491463" location="1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
648 <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
649 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
650 <Modification monoisotopicMassDelta="144.102063" location="2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
651 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
652 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
653 <Modification monoisotopicMassDelta="144.102063" location="7">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
654 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
655 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
656 <Modification monoisotopicMassDelta="15.99491463" location="10">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
657 <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
658 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
659 <Modification monoisotopicMassDelta="144.102063" location="16">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
660 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
661 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
662 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
663 <Peptide id="Pep33">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
664 <PeptideSequence>FLGRIGGNGEESENDK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
665 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
666 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
667 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
668 <Modification monoisotopicMassDelta="343.03178476" location="12">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
669 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
670 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
671 <Modification monoisotopicMassDelta="144.102063" location="16">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
672 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
673 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
674 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
675 <Peptide id="Pep34">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
676 <PeptideSequence>DNESEEGNGGIRGLFK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
677 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
678 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
679 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
680 <Modification monoisotopicMassDelta="343.03178476" location="4">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
681 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
682 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
683 <Modification monoisotopicMassDelta="144.102063" location="16">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
684 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
685 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
686 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
687 <Peptide id="Pep35">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
688 <PeptideSequence>RCNVARPHLRAYCK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
689 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
690 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
691 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
692 <Modification monoisotopicMassDelta="57.021463735" location="2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
693 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
694 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
695 <Modification monoisotopicMassDelta="57.021463735" location="13">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
696 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
697 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
698 <Modification monoisotopicMassDelta="343.03178476" location="13">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
699 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
700 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
701 <Modification monoisotopicMassDelta="144.102063" location="14">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
702 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
703 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
704 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
705 <Peptide id="Pep36">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
706 <PeptideSequence>CYARLHPRAVNCRK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
707 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
708 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
709 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
710 <Modification monoisotopicMassDelta="57.021463735" location="1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
711 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
712 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
713 <Modification monoisotopicMassDelta="343.03178476" location="1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
714 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
715 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
716 <Modification monoisotopicMassDelta="57.021463735" location="12">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
717 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
718 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
719 <Modification monoisotopicMassDelta="144.102063" location="14">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
720 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
721 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
722 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
723 <Peptide id="Pep37">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
724 <PeptideSequence>MSHLRELQPVKYK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
725 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
726 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
727 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
728 <Modification monoisotopicMassDelta="15.99491463" location="1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
729 <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
730 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
731 <Modification monoisotopicMassDelta="343.03178476" location="2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
732 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
733 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
734 <Modification monoisotopicMassDelta="144.102063" location="11">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
735 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
736 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
737 <Modification monoisotopicMassDelta="144.102063" location="13">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
738 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
739 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
740 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
741 <Peptide id="Pep38">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
742 <PeptideSequence>ERMTEIKPLLCAGK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
743 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
744 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
745 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
746 <Modification monoisotopicMassDelta="144.102063" location="7">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
747 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
748 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
749 <Modification monoisotopicMassDelta="57.021463735" location="11">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
750 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
751 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
752 <Modification monoisotopicMassDelta="343.03178476" location="11">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
753 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
754 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
755 <Modification monoisotopicMassDelta="144.102063" location="14">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
756 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
757 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
758 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
759 <Peptide id="Pep39">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
760 <PeptideSequence>QLCLCVEQHLK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
761 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
762 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
763 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
764 <Modification monoisotopicMassDelta="-17.026549105" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
765 <cvParam accession="UNIMOD:28" cvRef="UNIMOD" name="Gln-&gt;pyro-Glu"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
766 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
767 <Modification monoisotopicMassDelta="57.021463735" location="3">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
768 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
769 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
770 <Modification monoisotopicMassDelta="57.021463735" location="5">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
771 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
772 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
773 <Modification monoisotopicMassDelta="343.03178476" location="5">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
774 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
775 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
776 <Modification monoisotopicMassDelta="144.102063" location="11">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
777 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
778 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
779 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
780 <Peptide id="Pep40">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
781 <PeptideSequence>QLCLCVEQHLK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
782 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
783 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
784 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
785 <Modification monoisotopicMassDelta="-17.026549105" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
786 <cvParam accession="UNIMOD:28" cvRef="UNIMOD" name="Gln-&gt;pyro-Glu"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
787 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
788 <Modification monoisotopicMassDelta="57.021463735" location="3">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
789 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
790 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
791 <Modification monoisotopicMassDelta="343.03178476" location="3">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
792 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
793 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
794 <Modification monoisotopicMassDelta="57.021463735" location="5">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
795 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
796 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
797 <Modification monoisotopicMassDelta="144.102063" location="11">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
798 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
799 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
800 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
801 <Peptide id="Pep41">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
802 <PeptideSequence>ECCDKPLLEK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
803 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
804 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
805 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
806 <Modification monoisotopicMassDelta="57.021463735" location="2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
807 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
808 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
809 <Modification monoisotopicMassDelta="57.021463735" location="3">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
810 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
811 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
812 <Modification monoisotopicMassDelta="144.102063" location="5">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
813 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
814 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
815 <Modification monoisotopicMassDelta="144.102063" location="10">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
816 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
817 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
818 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
819 <Peptide id="Pep42">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
820 <PeptideSequence>LKETSSFRMRHLQSLHK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
821 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
822 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
823 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
824 <Modification monoisotopicMassDelta="144.102063" location="2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
825 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
826 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
827 <Modification monoisotopicMassDelta="343.03178476" location="14">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
828 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
829 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
830 <Modification monoisotopicMassDelta="144.102063" location="17">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
831 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
832 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
833 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
834 <Peptide id="Pep43">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
835 <PeptideSequence>QESSSISEAEMQK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
836 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
837 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
838 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
839 <Modification monoisotopicMassDelta="-17.026549105" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
840 <cvParam accession="UNIMOD:28" cvRef="UNIMOD" name="Gln-&gt;pyro-Glu"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
841 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
842 <Modification monoisotopicMassDelta="15.99491463" location="11">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
843 <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
844 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
845 <Modification monoisotopicMassDelta="144.102063" location="13">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
846 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
847 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
848 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
849 <Peptide id="Pep44">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
850 <PeptideSequence>QMEAESISSSEQK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
851 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
852 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
853 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
854 <Modification monoisotopicMassDelta="-17.026549105" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
855 <cvParam accession="UNIMOD:28" cvRef="UNIMOD" name="Gln-&gt;pyro-Glu"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
856 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
857 <Modification monoisotopicMassDelta="15.99491463" location="2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
858 <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
859 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
860 <Modification monoisotopicMassDelta="144.102063" location="13">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
861 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
862 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
863 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
864 <Peptide id="Pep45">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
865 <PeptideSequence>QEPERNECFLSHK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
866 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
867 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
868 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
869 <Modification monoisotopicMassDelta="57.021463735" location="8">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
870 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
871 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
872 <Modification monoisotopicMassDelta="343.03178476" location="8">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
873 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
874 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
875 <Modification monoisotopicMassDelta="343.03178476" location="11">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
876 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
877 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
878 <Modification monoisotopicMassDelta="144.102063" location="13">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
879 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
880 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
881 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
882 <Peptide id="Pep46">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
883 <PeptideSequence>HSLFCENREPEQK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
884 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
885 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
886 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
887 <Modification monoisotopicMassDelta="343.03178476" location="2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
888 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
889 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
890 <Modification monoisotopicMassDelta="57.021463735" location="5">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
891 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
892 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
893 <Modification monoisotopicMassDelta="343.03178476" location="5">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
894 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
895 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
896 <Modification monoisotopicMassDelta="144.102063" location="13">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
897 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
898 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
899 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
900 <Peptide id="Pep47">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
901 <PeptideSequence>LDSMSVDKIEERLK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
902 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
903 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
904 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
905 <Modification monoisotopicMassDelta="343.03178476" location="3">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
906 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
907 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
908 <Modification monoisotopicMassDelta="343.03178476" location="5">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
909 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
910 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
911 <Modification monoisotopicMassDelta="144.102063" location="8">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
912 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
913 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
914 <Modification monoisotopicMassDelta="144.102063" location="14">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
915 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
916 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
917 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
918 <Peptide id="Pep48">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
919 <PeptideSequence>LREEIKDVSMSDLK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
920 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
921 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
922 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
923 <Modification monoisotopicMassDelta="144.102063" location="6">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
924 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
925 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
926 <Modification monoisotopicMassDelta="343.03178476" location="9">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
927 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
928 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
929 <Modification monoisotopicMassDelta="343.03178476" location="11">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
930 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
931 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
932 <Modification monoisotopicMassDelta="144.102063" location="14">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
933 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
934 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
935 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
936 <Peptide id="Pep49">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
937 <PeptideSequence>VASLRETYGDMADCCEK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
938 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
939 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
940 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
941 <Modification monoisotopicMassDelta="15.99491463" location="11">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
942 <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
943 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
944 <Modification monoisotopicMassDelta="57.021463735" location="14">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
945 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
946 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
947 <Modification monoisotopicMassDelta="57.021463735" location="15">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
948 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
949 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
950 <Modification monoisotopicMassDelta="144.102063" location="17">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
951 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
952 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
953 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
954 <Peptide id="Pep50">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
955 <PeptideSequence>ECCDAMDGYTERLSAVK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
956 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
957 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
958 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
959 <Modification monoisotopicMassDelta="57.021463735" location="2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
960 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
961 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
962 <Modification monoisotopicMassDelta="57.021463735" location="3">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
963 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
964 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
965 <Modification monoisotopicMassDelta="15.99491463" location="6">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
966 <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
967 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
968 <Modification monoisotopicMassDelta="144.102063" location="17">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
969 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
970 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
971 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
972 <Peptide id="Pep51">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
973 <PeptideSequence>LQKVAHDLMEIEGEPAPDRK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
974 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
975 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
976 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
977 <Modification monoisotopicMassDelta="144.102063" location="3">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
978 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
979 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
980 <Modification monoisotopicMassDelta="144.102063" location="20">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
981 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
982 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
983 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
984 <Peptide id="Pep52">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
985 <PeptideSequence>RDPAPEGEIEMLDHAVKQLK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
986 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
987 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
988 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
989 <Modification monoisotopicMassDelta="144.102063" location="17">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
990 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
991 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
992 <Modification monoisotopicMassDelta="144.102063" location="20">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
993 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
994 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
995 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
996 <Peptide id="Pep53">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
997 <PeptideSequence>RFQAFMNNKRSTDKMK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
998 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
999 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1000 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1001 <Modification monoisotopicMassDelta="144.102063" location="9">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1002 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1003 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1004 <Modification monoisotopicMassDelta="343.03178476" location="11">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1005 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1006 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1007 <Modification monoisotopicMassDelta="144.102063" location="14">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1008 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1009 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1010 <Modification monoisotopicMassDelta="15.99491463" location="15">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1011 <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1012 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1013 <Modification monoisotopicMassDelta="144.102063" location="16">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1014 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1015 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1016 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1017 <Peptide id="Pep54">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1018 <PeptideSequence>SMENEDKEETVAK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1019 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1020 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1021 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1022 <Modification monoisotopicMassDelta="15.99491463" location="2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1023 <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1024 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1025 <Modification monoisotopicMassDelta="144.102063" location="7">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1026 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1027 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1028 <Modification monoisotopicMassDelta="144.102063" location="13">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1029 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1030 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1031 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1032 <Peptide id="Pep55">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1033 <PeptideSequence>SRGVLSAVSSKSQILQEK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1034 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1035 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1036 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1037 <Modification monoisotopicMassDelta="343.03178476" location="6">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1038 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1039 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1040 <Modification monoisotopicMassDelta="343.03178476" location="10">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1041 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1042 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1043 <Modification monoisotopicMassDelta="144.102063" location="11">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1044 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1045 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1046 <Modification monoisotopicMassDelta="144.102063" location="18">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1047 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1048 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1049 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1050 <Peptide id="Pep56">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1051 <PeptideSequence>SRGVLSAVSSKSQILQEK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1052 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1053 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1054 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1055 <Modification monoisotopicMassDelta="343.03178476" location="6">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1056 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1057 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1058 <Modification monoisotopicMassDelta="343.03178476" location="9">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1059 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1060 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1061 <Modification monoisotopicMassDelta="144.102063" location="11">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1062 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1063 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1064 <Modification monoisotopicMassDelta="144.102063" location="18">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1065 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1066 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1067 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1068 <Peptide id="Pep57">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1069 <PeptideSequence>SRGVLSAVSSKSQILQEK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1070 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1071 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1072 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1073 <Modification monoisotopicMassDelta="343.03178476" location="9">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1074 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1075 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1076 <Modification monoisotopicMassDelta="343.03178476" location="10">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1077 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1078 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1079 <Modification monoisotopicMassDelta="144.102063" location="11">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1080 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1081 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1082 <Modification monoisotopicMassDelta="144.102063" location="18">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1083 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1084 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1085 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1086 <Peptide id="Pep58">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1087 <PeptideSequence>SRGVLSAVSSKSQILQEK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1088 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1089 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1090 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1091 <Modification monoisotopicMassDelta="343.03178476" location="6">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1092 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1093 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1094 <Modification monoisotopicMassDelta="144.102063" location="11">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1095 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1096 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1097 <Modification monoisotopicMassDelta="343.03178476" location="12">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1098 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1099 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1100 <Modification monoisotopicMassDelta="144.102063" location="18">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1101 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1102 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1103 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1104 <Peptide id="Pep59">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1105 <PeptideSequence>SRGVLSAVSSKSQILQEK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1106 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1107 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1108 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1109 <Modification monoisotopicMassDelta="343.03178476" location="10">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1110 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1111 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1112 <Modification monoisotopicMassDelta="144.102063" location="11">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1113 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1114 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1115 <Modification monoisotopicMassDelta="343.03178476" location="12">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1116 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1117 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1118 <Modification monoisotopicMassDelta="144.102063" location="18">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1119 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1120 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1121 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1122 <Peptide id="Pep60">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1123 <PeptideSequence>SRGVLSAVSSKSQILQEK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1124 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1125 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1126 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1127 <Modification monoisotopicMassDelta="343.03178476" location="9">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1128 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1129 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1130 <Modification monoisotopicMassDelta="144.102063" location="11">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1131 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1132 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1133 <Modification monoisotopicMassDelta="343.03178476" location="12">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1134 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1135 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1136 <Modification monoisotopicMassDelta="144.102063" location="18">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1137 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1138 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1139 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1140 <Peptide id="Pep61">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1141 <PeptideSequence>KSIDEMNNAWENLNK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1142 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1143 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1144 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1145 <Modification monoisotopicMassDelta="144.102063" location="1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1146 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1147 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1148 <Modification monoisotopicMassDelta="343.03178476" location="2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1149 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1150 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1151 <Modification monoisotopicMassDelta="15.99491463" location="6">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1152 <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1153 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1154 <Modification monoisotopicMassDelta="144.102063" location="15">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1155 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1156 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1157 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1158 <Peptide id="Pep62">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1159 <PeptideSequence>NLNEWANNMEDISKK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1160 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1161 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1162 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1163 <Modification monoisotopicMassDelta="15.99491463" location="9">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1164 <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1165 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1166 <Modification monoisotopicMassDelta="343.03178476" location="13">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1167 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1168 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1169 <Modification monoisotopicMassDelta="144.102063" location="14">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1170 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1171 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1172 <Modification monoisotopicMassDelta="144.102063" location="15">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1173 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1174 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1175 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1176 <Peptide id="Pep63">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1177 <PeptideSequence>VKESLDQLLEQYQTSK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1178 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1179 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1180 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1181 <Modification monoisotopicMassDelta="144.102063" location="2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1182 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1183 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1184 <Modification monoisotopicMassDelta="343.03178476" location="4">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1185 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1186 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1187 <Modification monoisotopicMassDelta="343.03178476" location="15">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1188 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1189 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1190 <Modification monoisotopicMassDelta="144.102063" location="16">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1191 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1192 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1193 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1194 <Peptide id="Pep64">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1195 <PeptideSequence>STQYQELLQDLSEKVK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1196 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1197 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1198 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1199 <Modification monoisotopicMassDelta="343.03178476" location="1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1200 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1201 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1202 <Modification monoisotopicMassDelta="343.03178476" location="12">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1203 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1204 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1205 <Modification monoisotopicMassDelta="144.102063" location="14">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1206 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1207 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1208 <Modification monoisotopicMassDelta="144.102063" location="16">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1209 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1210 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1211 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1212 <Peptide id="Pep65">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1213 <PeptideSequence>MAFRDVAVAFTQK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1214 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1215 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1216 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1217 <Modification monoisotopicMassDelta="144.102063" location="13">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1218 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1219 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1220 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1221 <Peptide id="Pep66">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1222 <PeptideSequence>ESTLHLVLRLRGGC</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1223 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1224 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1225 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1226 <Modification monoisotopicMassDelta="343.03178476" location="2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1227 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1228 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1229 <Modification monoisotopicMassDelta="57.021463735" location="14">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1230 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1231 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1232 <Modification monoisotopicMassDelta="343.03178476" location="14">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1233 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1234 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1235 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1236 <Peptide id="Pep67">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1237 <PeptideSequence>ILWAQKKAMGSNMEKVCLK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1238 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1239 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1240 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1241 <Modification monoisotopicMassDelta="144.102063" location="6">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1242 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1243 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1244 <Modification monoisotopicMassDelta="144.102063" location="7">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1245 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1246 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1247 <Modification monoisotopicMassDelta="144.102063" location="15">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1248 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1249 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1250 <Modification monoisotopicMassDelta="57.021463735" location="17">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1251 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1252 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1253 <Modification monoisotopicMassDelta="144.102063" location="19">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1254 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1255 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1256 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1257 <Peptide id="Pep68">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1258 <PeptideSequence>LCVKEMNSGMAKKQAWLIK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1259 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1260 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1261 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1262 <Modification monoisotopicMassDelta="57.021463735" location="2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1263 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1264 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1265 <Modification monoisotopicMassDelta="144.102063" location="4">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1266 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1267 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1268 <Modification monoisotopicMassDelta="144.102063" location="12">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1269 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1270 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1271 <Modification monoisotopicMassDelta="144.102063" location="13">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1272 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1273 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1274 <Modification monoisotopicMassDelta="144.102063" location="19">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1275 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1276 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1277 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1278 <Peptide id="Pep69">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1279 <PeptideSequence>VFIQMGGRLRLVLHLTSEK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1280 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1281 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1282 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1283 <Modification monoisotopicMassDelta="144.102063" location="19">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1284 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1285 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1286 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1287 <Peptide id="Pep70">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1288 <PeptideSequence>ESTLHLVLRLRGGMQIFVK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1289 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1290 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1291 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1292 <Modification monoisotopicMassDelta="144.102063" location="19">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1293 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1294 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1295 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1296 <Peptide id="Pep71">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1297 <PeptideSequence>QTVEAYSAAVQSQLQWMK</PeptideSequence>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1298 <Modification monoisotopicMassDelta="144.102063" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1299 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1300 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1301 <Modification monoisotopicMassDelta="-17.026549105" location="0">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1302 <cvParam accession="UNIMOD:28" cvRef="UNIMOD" name="Gln-&gt;pyro-Glu"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1303 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1304 <Modification monoisotopicMassDelta="144.102063" location="18">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1305 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1306 </Modification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1307 </Peptide>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1308 <PeptideEvidence isDecoy="false" post="Y" pre="K" end="160" start="141" peptide_ref="Pep1" dBSequence_ref="DBSeq43937" id="PepEv_44077_1_141"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1309 <PeptideEvidence isDecoy="true" post="N" pre="K" end="5899" start="5889" peptide_ref="Pep2" dBSequence_ref="DBSeq65480" id="PepEv_71368_2_5889"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1310 <PeptideEvidence isDecoy="false" post="V" pre="K" end="496" start="482" peptide_ref="Pep3" dBSequence_ref="DBSeq27657" id="PepEv_28138_3_482"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1311 <PeptideEvidence isDecoy="false" post="V" pre="K" end="496" start="482" peptide_ref="Pep3" dBSequence_ref="DBSeq28473" id="PepEv_28954_3_482"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1312 <PeptideEvidence isDecoy="false" post="V" pre="K" end="496" start="482" peptide_ref="Pep3" dBSequence_ref="DBSeq29285" id="PepEv_29766_3_482"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1313 <PeptideEvidence isDecoy="false" post="V" pre="K" end="496" start="482" peptide_ref="Pep3" dBSequence_ref="DBSeq37511" id="PepEv_37992_3_482"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1314 <PeptideEvidence isDecoy="true" post="E" pre="K" end="278" start="264" peptide_ref="Pep4" dBSequence_ref="DBSeq63026" id="PepEv_63289_4_264"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1315 <PeptideEvidence isDecoy="true" post="E" pre="K" end="278" start="264" peptide_ref="Pep4" dBSequence_ref="DBSeq63881" id="PepEv_64144_4_264"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1316 <PeptideEvidence isDecoy="true" post="E" pre="K" end="278" start="264" peptide_ref="Pep4" dBSequence_ref="DBSeq91148" id="PepEv_91411_4_264"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1317 <PeptideEvidence isDecoy="true" post="E" pre="K" end="278" start="264" peptide_ref="Pep4" dBSequence_ref="DBSeq92003" id="PepEv_92266_4_264"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1318 <PeptideEvidence isDecoy="true" post="R" pre="K" end="378" start="367" peptide_ref="Pep5" dBSequence_ref="DBSeq104353" id="PepEv_104719_5_367"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1319 <PeptideEvidence isDecoy="true" post="R" pre="K" end="378" start="367" peptide_ref="Pep5" dBSequence_ref="DBSeq107227" id="PepEv_107593_5_367"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1320 <PeptideEvidence isDecoy="true" post="R" pre="K" end="378" start="367" peptide_ref="Pep5" dBSequence_ref="DBSeq108359" id="PepEv_108725_5_367"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1321 <PeptideEvidence isDecoy="true" post="R" pre="K" end="378" start="367" peptide_ref="Pep5" dBSequence_ref="DBSeq109459" id="PepEv_109825_5_367"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1322 <PeptideEvidence isDecoy="false" post="K" pre="K" end="734" start="723" peptide_ref="Pep6" dBSequence_ref="DBSeq48378" id="PepEv_49100_6_723"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1323 <PeptideEvidence isDecoy="false" post="K" pre="K" end="766" start="755" peptide_ref="Pep6" dBSequence_ref="DBSeq51252" id="PepEv_52006_6_755"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1324 <PeptideEvidence isDecoy="false" post="K" pre="K" end="734" start="723" peptide_ref="Pep6" dBSequence_ref="DBSeq52384" id="PepEv_53106_6_723"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1325 <PeptideEvidence isDecoy="false" post="K" pre="K" end="734" start="723" peptide_ref="Pep6" dBSequence_ref="DBSeq53484" id="PepEv_54206_6_723"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1326 <PeptideEvidence isDecoy="true" post="P" pre="K" end="205" start="196" peptide_ref="Pep7" dBSequence_ref="DBSeq64736" id="PepEv_64931_7_196"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1327 <PeptideEvidence isDecoy="false" post="F" pre="K" end="394" start="385" peptide_ref="Pep8" dBSequence_ref="DBSeq8761" id="PepEv_9145_8_385"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1328 <PeptideEvidence isDecoy="true" post="T" pre="K" end="6578" start="6569" peptide_ref="Pep9" dBSequence_ref="DBSeq65480" id="PepEv_72048_9_6569"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1329 <PeptideEvidence isDecoy="true" post="T" pre="K" end="4468" start="4459" peptide_ref="Pep9" dBSequence_ref="DBSeq73091" id="PepEv_77549_9_4459"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1330 <PeptideEvidence isDecoy="true" post="T" pre="K" end="4468" start="4459" peptide_ref="Pep9" dBSequence_ref="DBSeq94489" id="PepEv_98947_9_4459"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1331 <PeptideEvidence isDecoy="true" post="T" pre="K" end="6578" start="6569" peptide_ref="Pep10" dBSequence_ref="DBSeq65480" id="PepEv_72048_10_6569"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1332 <PeptideEvidence isDecoy="true" post="T" pre="K" end="4468" start="4459" peptide_ref="Pep10" dBSequence_ref="DBSeq73091" id="PepEv_77549_10_4459"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1333 <PeptideEvidence isDecoy="true" post="T" pre="K" end="4468" start="4459" peptide_ref="Pep10" dBSequence_ref="DBSeq94489" id="PepEv_98947_10_4459"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1334 <PeptideEvidence isDecoy="true" post="Q" pre="K" end="2180" start="2171" peptide_ref="Pep11" dBSequence_ref="DBSeq65480" id="PepEv_67650_11_2171"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1335 <PeptideEvidence isDecoy="true" post="Q" pre="K" end="2110" start="2101" peptide_ref="Pep11" dBSequence_ref="DBSeq73091" id="PepEv_75191_11_2101"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1336 <PeptideEvidence isDecoy="true" post="Q" pre="K" end="2110" start="2101" peptide_ref="Pep11" dBSequence_ref="DBSeq94489" id="PepEv_96589_11_2101"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1337 <PeptideEvidence isDecoy="false" post="A" pre="K" end="5441" start="5432" peptide_ref="Pep12" dBSequence_ref="DBSeq9505" id="PepEv_14936_12_5432"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1338 <PeptideEvidence isDecoy="false" post="A" pre="K" end="3399" start="3390" peptide_ref="Pep12" dBSequence_ref="DBSeq17116" id="PepEv_20505_12_3390"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1339 <PeptideEvidence isDecoy="false" post="A" pre="K" end="3323" start="3314" peptide_ref="Pep12" dBSequence_ref="DBSeq38514" id="PepEv_41827_12_3314"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1340 <PeptideEvidence isDecoy="true" post="E" pre="K" end="1379" start="1361" peptide_ref="Pep13" dBSequence_ref="DBSeq65480" id="PepEv_66840_13_1361"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1341 <PeptideEvidence isDecoy="true" post="E" pre="K" end="1309" start="1291" peptide_ref="Pep13" dBSequence_ref="DBSeq73091" id="PepEv_74381_13_1291"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1342 <PeptideEvidence isDecoy="true" post="E" pre="K" end="1309" start="1291" peptide_ref="Pep13" dBSequence_ref="DBSeq94489" id="PepEv_95779_13_1291"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1343 <PeptideEvidence isDecoy="false" post="T" pre="K" end="6251" start="6233" peptide_ref="Pep14" dBSequence_ref="DBSeq9505" id="PepEv_15737_14_6233"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1344 <PeptideEvidence isDecoy="false" post="T" pre="K" end="4209" start="4191" peptide_ref="Pep14" dBSequence_ref="DBSeq17116" id="PepEv_21306_14_4191"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1345 <PeptideEvidence isDecoy="false" post="T" pre="K" end="4133" start="4115" peptide_ref="Pep14" dBSequence_ref="DBSeq38514" id="PepEv_42628_14_4115"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1346 <PeptideEvidence isDecoy="false" post="L" pre="K" end="5805" start="5796" peptide_ref="Pep15" dBSequence_ref="DBSeq9505" id="PepEv_15300_15_5796"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1347 <PeptideEvidence isDecoy="false" post="L" pre="K" end="3763" start="3754" peptide_ref="Pep15" dBSequence_ref="DBSeq17116" id="PepEv_20869_15_3754"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1348 <PeptideEvidence isDecoy="false" post="L" pre="K" end="3687" start="3678" peptide_ref="Pep15" dBSequence_ref="DBSeq38514" id="PepEv_42191_15_3678"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1349 <PeptideEvidence isDecoy="true" post="D" pre="K" end="1816" start="1807" peptide_ref="Pep16" dBSequence_ref="DBSeq65480" id="PepEv_67286_16_1807"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1350 <PeptideEvidence isDecoy="true" post="D" pre="K" end="1746" start="1737" peptide_ref="Pep16" dBSequence_ref="DBSeq73091" id="PepEv_74827_16_1737"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1351 <PeptideEvidence isDecoy="true" post="D" pre="K" end="1746" start="1737" peptide_ref="Pep16" dBSequence_ref="DBSeq94489" id="PepEv_96225_16_1737"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1352 <PeptideEvidence isDecoy="false" post="E" pre="K" end="90" start="74" peptide_ref="Pep17" dBSequence_ref="DBSeq23283" id="PepEv_23356_17_74"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1353 <PeptideEvidence isDecoy="true" post="Y" pre="K" end="87" start="69" peptide_ref="Pep18" dBSequence_ref="DBSeq79465" id="PepEv_79533_18_69"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1354 <PeptideEvidence isDecoy="true" post="T" pre="K" end="4200" start="4187" peptide_ref="Pep19" dBSequence_ref="DBSeq65480" id="PepEv_69666_19_4187"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1355 <PeptideEvidence isDecoy="false" post="E" pre="K" end="47" start="37" peptide_ref="Pep20" dBSequence_ref="DBSeq46622" id="PepEv_46658_20_37"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1356 <PeptideEvidence isDecoy="false" post="A" pre="K" end="426" start="417" peptide_ref="Pep21" dBSequence_ref="DBSeq9505" id="PepEv_9921_21_417"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1357 <PeptideEvidence isDecoy="false" post="A" pre="K" end="426" start="417" peptide_ref="Pep21" dBSequence_ref="DBSeq17116" id="PepEv_17532_21_417"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1358 <PeptideEvidence isDecoy="false" post="A" pre="K" end="350" start="341" peptide_ref="Pep21" dBSequence_ref="DBSeq38514" id="PepEv_38854_21_341"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1359 <PeptideEvidence isDecoy="false" post="L" pre="K" end="3077" start="3067" peptide_ref="Pep22" dBSequence_ref="DBSeq9505" id="PepEv_12571_22_3067"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1360 <PeptideEvidence isDecoy="true" post="S" pre="K" end="470" start="451" peptide_ref="Pep23" dBSequence_ref="DBSeq87068" id="PepEv_87518_23_451"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1361 <PeptideEvidence isDecoy="true" post="S" pre="K" end="470" start="451" peptide_ref="Pep23" dBSequence_ref="DBSeq87837" id="PepEv_88287_23_451"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1362 <PeptideEvidence isDecoy="true" post="S" pre="K" end="470" start="451" peptide_ref="Pep23" dBSequence_ref="DBSeq88550" id="PepEv_89000_23_451"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1363 <PeptideEvidence isDecoy="true" post="S" pre="K" end="470" start="451" peptide_ref="Pep23" dBSequence_ref="DBSeq103640" id="PepEv_104090_23_451"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1364 <PeptideEvidence isDecoy="true" post="S" pre="K" end="470" start="451" peptide_ref="Pep24" dBSequence_ref="DBSeq87068" id="PepEv_87518_24_451"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1365 <PeptideEvidence isDecoy="true" post="S" pre="K" end="470" start="451" peptide_ref="Pep24" dBSequence_ref="DBSeq87837" id="PepEv_88287_24_451"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1366 <PeptideEvidence isDecoy="true" post="S" pre="K" end="470" start="451" peptide_ref="Pep24" dBSequence_ref="DBSeq88550" id="PepEv_89000_24_451"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1367 <PeptideEvidence isDecoy="true" post="S" pre="K" end="470" start="451" peptide_ref="Pep24" dBSequence_ref="DBSeq103640" id="PepEv_104090_24_451"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1368 <PeptideEvidence isDecoy="true" post="M" pre="K" end="6763" start="6753" peptide_ref="Pep25" dBSequence_ref="DBSeq65480" id="PepEv_72232_25_6753"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1369 <PeptideEvidence isDecoy="true" post="M" pre="K" end="4651" start="4641" peptide_ref="Pep25" dBSequence_ref="DBSeq73091" id="PepEv_77731_25_4641"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1370 <PeptideEvidence isDecoy="true" post="M" pre="K" end="4651" start="4641" peptide_ref="Pep25" dBSequence_ref="DBSeq94489" id="PepEv_99129_25_4641"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1371 <PeptideEvidence isDecoy="false" post="E" pre="K" end="859" start="849" peptide_ref="Pep26" dBSequence_ref="DBSeq9505" id="PepEv_10353_26_849"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1372 <PeptideEvidence isDecoy="false" post="E" pre="K" end="859" start="849" peptide_ref="Pep26" dBSequence_ref="DBSeq17116" id="PepEv_17964_26_849"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1373 <PeptideEvidence isDecoy="false" post="E" pre="K" end="783" start="773" peptide_ref="Pep26" dBSequence_ref="DBSeq38514" id="PepEv_39286_26_773"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1374 <PeptideEvidence isDecoy="true" post="V" pre="K" end="2459" start="2447" peptide_ref="Pep27" dBSequence_ref="DBSeq65480" id="PepEv_67926_27_2447"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1375 <PeptideEvidence isDecoy="true" post="V" pre="K" end="2389" start="2377" peptide_ref="Pep27" dBSequence_ref="DBSeq73091" id="PepEv_75467_27_2377"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1376 <PeptideEvidence isDecoy="true" post="V" pre="K" end="2389" start="2377" peptide_ref="Pep27" dBSequence_ref="DBSeq94489" id="PepEv_96865_27_2377"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1377 <PeptideEvidence isDecoy="false" post="L" pre="K" end="5165" start="5153" peptide_ref="Pep28" dBSequence_ref="DBSeq9505" id="PepEv_14657_28_5153"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1378 <PeptideEvidence isDecoy="false" post="L" pre="K" end="3123" start="3111" peptide_ref="Pep28" dBSequence_ref="DBSeq17116" id="PepEv_20226_28_3111"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1379 <PeptideEvidence isDecoy="false" post="L" pre="K" end="3047" start="3035" peptide_ref="Pep28" dBSequence_ref="DBSeq38514" id="PepEv_41548_28_3035"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1380 <PeptideEvidence isDecoy="false" post="R" pre="K" end="152" start="135" peptide_ref="Pep29" dBSequence_ref="DBSeq31093" id="PepEv_31227_29_135"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1381 <PeptideEvidence isDecoy="false" post="R" pre="K" end="96" start="79" peptide_ref="Pep29" dBSequence_ref="DBSeq31862" id="PepEv_31940_29_79"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1382 <PeptideEvidence isDecoy="false" post="R" pre="K" end="96" start="79" peptide_ref="Pep29" dBSequence_ref="DBSeq47665" id="PepEv_47743_29_79"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1383 <PeptideEvidence isDecoy="false" post="L" pre="K" end="483" start="468" peptide_ref="Pep30" dBSequence_ref="DBSeq9505" id="PepEv_9972_30_468"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1384 <PeptideEvidence isDecoy="false" post="L" pre="K" end="483" start="468" peptide_ref="Pep30" dBSequence_ref="DBSeq17116" id="PepEv_17583_30_468"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1385 <PeptideEvidence isDecoy="false" post="L" pre="K" end="407" start="392" peptide_ref="Pep30" dBSequence_ref="DBSeq38514" id="PepEv_38905_30_392"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1386 <PeptideEvidence isDecoy="true" post="E" pre="K" end="42" start="27" peptide_ref="Pep31" dBSequence_ref="DBSeq84448" id="PepEv_84474_31_27"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1387 <PeptideEvidence isDecoy="false" post="N" pre="K" end="786" start="771" peptide_ref="Pep32" dBSequence_ref="DBSeq28473" id="PepEv_29243_32_771"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1388 <PeptideEvidence isDecoy="true" post="I" pre="K" end="254" start="239" peptide_ref="Pep33" dBSequence_ref="DBSeq104353" id="PepEv_104591_33_239"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1389 <PeptideEvidence isDecoy="true" post="I" pre="K" end="254" start="239" peptide_ref="Pep33" dBSequence_ref="DBSeq107227" id="PepEv_107465_33_239"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1390 <PeptideEvidence isDecoy="true" post="I" pre="K" end="254" start="239" peptide_ref="Pep33" dBSequence_ref="DBSeq108359" id="PepEv_108597_33_239"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1391 <PeptideEvidence isDecoy="true" post="I" pre="K" end="254" start="239" peptide_ref="Pep33" dBSequence_ref="DBSeq109459" id="PepEv_109697_33_239"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1392 <PeptideEvidence isDecoy="false" post="K" pre="K" end="862" start="847" peptide_ref="Pep34" dBSequence_ref="DBSeq48378" id="PepEv_49224_34_847"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1393 <PeptideEvidence isDecoy="false" post="K" pre="K" end="894" start="879" peptide_ref="Pep34" dBSequence_ref="DBSeq51252" id="PepEv_52130_34_879"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1394 <PeptideEvidence isDecoy="false" post="K" pre="K" end="862" start="847" peptide_ref="Pep34" dBSequence_ref="DBSeq52384" id="PepEv_53230_34_847"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1395 <PeptideEvidence isDecoy="false" post="K" pre="K" end="862" start="847" peptide_ref="Pep34" dBSequence_ref="DBSeq53484" id="PepEv_54330_34_847"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1396 <PeptideEvidence isDecoy="true" post="R" pre="K" end="31" start="18" peptide_ref="Pep35" dBSequence_ref="DBSeq79850" id="PepEv_79867_35_18"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1397 <PeptideEvidence isDecoy="true" post="R" pre="K" end="31" start="18" peptide_ref="Pep35" dBSequence_ref="DBSeq102315" id="PepEv_102332_35_18"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1398 <PeptideEvidence isDecoy="false" post="K" pre="K" end="112" start="99" peptide_ref="Pep36" dBSequence_ref="DBSeq23875" id="PepEv_23973_36_99"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1399 <PeptideEvidence isDecoy="false" post="K" pre="K" end="112" start="99" peptide_ref="Pep36" dBSequence_ref="DBSeq46340" id="PepEv_46438_36_99"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1400 <PeptideEvidence isDecoy="true" post="K" pre="K" end="89" start="77" peptide_ref="Pep37" dBSequence_ref="DBSeq79465" id="PepEv_79541_37_77"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1401 <PeptideEvidence isDecoy="true" post="D" pre="K" end="411" start="398" peptide_ref="Pep38" dBSequence_ref="DBSeq99912" id="PepEv_100309_38_398"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1402 <PeptideEvidence isDecoy="false" post="E" pre="K" end="859" start="849" peptide_ref="Pep39" dBSequence_ref="DBSeq9505" id="PepEv_10353_39_849"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1403 <PeptideEvidence isDecoy="false" post="E" pre="K" end="859" start="849" peptide_ref="Pep39" dBSequence_ref="DBSeq17116" id="PepEv_17964_39_849"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1404 <PeptideEvidence isDecoy="false" post="E" pre="K" end="783" start="773" peptide_ref="Pep39" dBSequence_ref="DBSeq38514" id="PepEv_39286_39_773"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1405 <PeptideEvidence isDecoy="false" post="E" pre="K" end="859" start="849" peptide_ref="Pep40" dBSequence_ref="DBSeq9505" id="PepEv_10353_40_849"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1406 <PeptideEvidence isDecoy="false" post="E" pre="K" end="859" start="849" peptide_ref="Pep40" dBSequence_ref="DBSeq17116" id="PepEv_17964_40_849"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1407 <PeptideEvidence isDecoy="false" post="E" pre="K" end="783" start="773" peptide_ref="Pep40" dBSequence_ref="DBSeq38514" id="PepEv_39286_40_773"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1408 <PeptideEvidence isDecoy="false" post="S" pre="K" end="309" start="300" peptide_ref="Pep41" dBSequence_ref="DBSeq43937" id="PepEv_44236_41_300"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1409 <PeptideEvidence isDecoy="false" post="F" pre="K" end="760" start="744" peptide_ref="Pep42" dBSequence_ref="DBSeq9505" id="PepEv_10248_42_744"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1410 <PeptideEvidence isDecoy="false" post="F" pre="K" end="760" start="744" peptide_ref="Pep42" dBSequence_ref="DBSeq17116" id="PepEv_17859_42_744"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1411 <PeptideEvidence isDecoy="false" post="F" pre="K" end="684" start="668" peptide_ref="Pep42" dBSequence_ref="DBSeq38514" id="PepEv_39181_42_668"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1412 <PeptideEvidence isDecoy="true" post="I" pre="K" end="134" start="122" peptide_ref="Pep43" dBSequence_ref="DBSeq79258" id="PepEv_79379_43_122"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1413 <PeptideEvidence isDecoy="false" post="H" pre="K" end="86" start="74" peptide_ref="Pep44" dBSequence_ref="DBSeq23283" id="PepEv_23356_44_74"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1414 <PeptideEvidence isDecoy="false" post="D" pre="K" end="130" start="118" peptide_ref="Pep45" dBSequence_ref="DBSeq43937" id="PepEv_44054_45_118"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1415 <PeptideEvidence isDecoy="true" post="E" pre="K" end="491" start="479" peptide_ref="Pep46" dBSequence_ref="DBSeq99912" id="PepEv_100390_46_479"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1416 <PeptideEvidence isDecoy="true" post="P" pre="K" end="627" start="614" peptide_ref="Pep47" dBSequence_ref="DBSeq83632" id="PepEv_84245_47_614"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1417 <PeptideEvidence isDecoy="true" post="P" pre="K" end="623" start="610" peptide_ref="Pep47" dBSequence_ref="DBSeq84448" id="PepEv_85057_47_610"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1418 <PeptideEvidence isDecoy="true" post="P" pre="K" end="578" start="565" peptide_ref="Pep47" dBSequence_ref="DBSeq85260" id="PepEv_85824_47_565"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1419 <PeptideEvidence isDecoy="true" post="P" pre="K" end="438" start="425" peptide_ref="Pep47" dBSequence_ref="DBSeq93486" id="PepEv_93910_47_425"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1420 <PeptideEvidence isDecoy="false" post="D" pre="K" end="203" start="190" peptide_ref="Pep48" dBSequence_ref="DBSeq27657" id="PepEv_27846_48_190"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1421 <PeptideEvidence isDecoy="false" post="D" pre="K" end="203" start="190" peptide_ref="Pep48" dBSequence_ref="DBSeq28473" id="PepEv_28662_48_190"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1422 <PeptideEvidence isDecoy="false" post="D" pre="K" end="203" start="190" peptide_ref="Pep48" dBSequence_ref="DBSeq29285" id="PepEv_29474_48_190"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1423 <PeptideEvidence isDecoy="false" post="D" pre="K" end="203" start="190" peptide_ref="Pep48" dBSequence_ref="DBSeq37511" id="PepEv_37700_48_190"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1424 <PeptideEvidence isDecoy="false" post="Q" pre="K" end="117" start="101" peptide_ref="Pep49" dBSequence_ref="DBSeq43937" id="PepEv_44037_49_101"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1425 <PeptideEvidence isDecoy="true" post="C" pre="K" end="508" start="492" peptide_ref="Pep50" dBSequence_ref="DBSeq99912" id="PepEv_100403_50_492"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1426 <PeptideEvidence isDecoy="false" post="H" pre="K" end="4123" start="4104" peptide_ref="Pep51" dBSequence_ref="DBSeq9505" id="PepEv_13608_51_4104"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1427 <PeptideEvidence isDecoy="false" post="H" pre="K" end="2081" start="2062" peptide_ref="Pep51" dBSequence_ref="DBSeq17116" id="PepEv_19177_51_2062"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1428 <PeptideEvidence isDecoy="false" post="H" pre="K" end="2005" start="1986" peptide_ref="Pep51" dBSequence_ref="DBSeq38514" id="PepEv_40499_51_1986"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1429 <PeptideEvidence isDecoy="true" post="E" pre="K" end="3508" start="3489" peptide_ref="Pep52" dBSequence_ref="DBSeq65480" id="PepEv_68968_52_3489"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1430 <PeptideEvidence isDecoy="true" post="E" pre="K" end="3438" start="3419" peptide_ref="Pep52" dBSequence_ref="DBSeq73091" id="PepEv_76509_52_3419"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1431 <PeptideEvidence isDecoy="true" post="E" pre="K" end="3438" start="3419" peptide_ref="Pep52" dBSequence_ref="DBSeq94489" id="PepEv_97907_52_3419"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1432 <PeptideEvidence isDecoy="true" post="E" pre="K" end="42" start="27" peptide_ref="Pep53" dBSequence_ref="DBSeq84448" id="PepEv_84474_53_27"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1433 <PeptideEvidence isDecoy="false" post="M" pre="K" end="1125" start="1113" peptide_ref="Pep54" dBSequence_ref="DBSeq9505" id="PepEv_10617_54_1113"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1434 <PeptideEvidence isDecoy="false" post="M" pre="K" end="1123" start="1111" peptide_ref="Pep54" dBSequence_ref="DBSeq17116" id="PepEv_18226_54_1111"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1435 <PeptideEvidence isDecoy="false" post="M" pre="K" end="1047" start="1035" peptide_ref="Pep54" dBSequence_ref="DBSeq38514" id="PepEv_39548_54_1035"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1436 <PeptideEvidence isDecoy="true" post="E" pre="K" end="6698" start="6681" peptide_ref="Pep55" dBSequence_ref="DBSeq65480" id="PepEv_72160_55_6681"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1437 <PeptideEvidence isDecoy="true" post="E" pre="K" end="4588" start="4571" peptide_ref="Pep55" dBSequence_ref="DBSeq73091" id="PepEv_77661_55_4571"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1438 <PeptideEvidence isDecoy="true" post="E" pre="K" end="4588" start="4571" peptide_ref="Pep55" dBSequence_ref="DBSeq94489" id="PepEv_99059_55_4571"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1439 <PeptideEvidence isDecoy="true" post="E" pre="K" end="6698" start="6681" peptide_ref="Pep56" dBSequence_ref="DBSeq65480" id="PepEv_72160_56_6681"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1440 <PeptideEvidence isDecoy="true" post="E" pre="K" end="4588" start="4571" peptide_ref="Pep56" dBSequence_ref="DBSeq73091" id="PepEv_77661_56_4571"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1441 <PeptideEvidence isDecoy="true" post="E" pre="K" end="4588" start="4571" peptide_ref="Pep56" dBSequence_ref="DBSeq94489" id="PepEv_99059_56_4571"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1442 <PeptideEvidence isDecoy="true" post="E" pre="K" end="6698" start="6681" peptide_ref="Pep57" dBSequence_ref="DBSeq65480" id="PepEv_72160_57_6681"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1443 <PeptideEvidence isDecoy="true" post="E" pre="K" end="4588" start="4571" peptide_ref="Pep57" dBSequence_ref="DBSeq73091" id="PepEv_77661_57_4571"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1444 <PeptideEvidence isDecoy="true" post="E" pre="K" end="4588" start="4571" peptide_ref="Pep57" dBSequence_ref="DBSeq94489" id="PepEv_99059_57_4571"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1445 <PeptideEvidence isDecoy="true" post="E" pre="K" end="6698" start="6681" peptide_ref="Pep58" dBSequence_ref="DBSeq65480" id="PepEv_72160_58_6681"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1446 <PeptideEvidence isDecoy="true" post="E" pre="K" end="4588" start="4571" peptide_ref="Pep58" dBSequence_ref="DBSeq73091" id="PepEv_77661_58_4571"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1447 <PeptideEvidence isDecoy="true" post="E" pre="K" end="4588" start="4571" peptide_ref="Pep58" dBSequence_ref="DBSeq94489" id="PepEv_99059_58_4571"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1448 <PeptideEvidence isDecoy="true" post="E" pre="K" end="6698" start="6681" peptide_ref="Pep59" dBSequence_ref="DBSeq65480" id="PepEv_72160_59_6681"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1449 <PeptideEvidence isDecoy="true" post="E" pre="K" end="4588" start="4571" peptide_ref="Pep59" dBSequence_ref="DBSeq73091" id="PepEv_77661_59_4571"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1450 <PeptideEvidence isDecoy="true" post="E" pre="K" end="4588" start="4571" peptide_ref="Pep59" dBSequence_ref="DBSeq94489" id="PepEv_99059_59_4571"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1451 <PeptideEvidence isDecoy="true" post="E" pre="K" end="6698" start="6681" peptide_ref="Pep60" dBSequence_ref="DBSeq65480" id="PepEv_72160_60_6681"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1452 <PeptideEvidence isDecoy="true" post="E" pre="K" end="4588" start="4571" peptide_ref="Pep60" dBSequence_ref="DBSeq73091" id="PepEv_77661_60_4571"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1453 <PeptideEvidence isDecoy="true" post="E" pre="K" end="4588" start="4571" peptide_ref="Pep60" dBSequence_ref="DBSeq94489" id="PepEv_99059_60_4571"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1454 <PeptideEvidence isDecoy="false" post="T" pre="K" end="6251" start="6237" peptide_ref="Pep61" dBSequence_ref="DBSeq9505" id="PepEv_15741_61_6237"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1455 <PeptideEvidence isDecoy="false" post="T" pre="K" end="4209" start="4195" peptide_ref="Pep61" dBSequence_ref="DBSeq17116" id="PepEv_21310_61_4195"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1456 <PeptideEvidence isDecoy="false" post="T" pre="K" end="4133" start="4119" peptide_ref="Pep61" dBSequence_ref="DBSeq38514" id="PepEv_42632_61_4119"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1457 <PeptideEvidence isDecoy="true" post="V" pre="K" end="1375" start="1361" peptide_ref="Pep62" dBSequence_ref="DBSeq65480" id="PepEv_66840_62_1361"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1458 <PeptideEvidence isDecoy="true" post="V" pre="K" end="1305" start="1291" peptide_ref="Pep62" dBSequence_ref="DBSeq73091" id="PepEv_74381_62_1291"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1459 <PeptideEvidence isDecoy="true" post="V" pre="K" end="1305" start="1291" peptide_ref="Pep62" dBSequence_ref="DBSeq94489" id="PepEv_95779_62_1291"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1460 <PeptideEvidence isDecoy="true" post="V" pre="K" end="2879" start="2864" peptide_ref="Pep63" dBSequence_ref="DBSeq65480" id="PepEv_68343_63_2864"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1461 <PeptideEvidence isDecoy="true" post="V" pre="K" end="2809" start="2794" peptide_ref="Pep63" dBSequence_ref="DBSeq73091" id="PepEv_75884_63_2794"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1462 <PeptideEvidence isDecoy="true" post="V" pre="K" end="2809" start="2794" peptide_ref="Pep63" dBSequence_ref="DBSeq94489" id="PepEv_97282_63_2794"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1463 <PeptideEvidence isDecoy="false" post="A" pre="K" end="4748" start="4733" peptide_ref="Pep64" dBSequence_ref="DBSeq9505" id="PepEv_14237_64_4733"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1464 <PeptideEvidence isDecoy="false" post="A" pre="K" end="2706" start="2691" peptide_ref="Pep64" dBSequence_ref="DBSeq17116" id="PepEv_19806_64_2691"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1465 <PeptideEvidence isDecoy="false" post="A" pre="K" end="2630" start="2615" peptide_ref="Pep64" dBSequence_ref="DBSeq38514" id="PepEv_41128_64_2615"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1466 <PeptideEvidence isDecoy="false" post="E" pre="-" end="13" start="1" peptide_ref="Pep65" dBSequence_ref="DBSeq3312" id="PepEv_3312_65_1"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1467 <PeptideEvidence isDecoy="false" post="E" pre="-" end="13" start="1" peptide_ref="Pep65" dBSequence_ref="DBSeq27068" id="PepEv_27068_65_1"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1468 <PeptideEvidence isDecoy="false" post="-" pre="K" end="77" start="64" peptide_ref="Pep66" dBSequence_ref="DBSeq3901" id="PepEv_3964_66_64"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1469 <PeptideEvidence isDecoy="false" post="-" pre="K" end="77" start="64" peptide_ref="Pep66" dBSequence_ref="DBSeq30388" id="PepEv_30451_66_64"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1470 <PeptideEvidence isDecoy="false" post="-" pre="K" end="305" start="292" peptide_ref="Pep66" dBSequence_ref="DBSeq33261" id="PepEv_33552_66_292"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1471 <PeptideEvidence isDecoy="false" post="-" pre="K" end="305" start="292" peptide_ref="Pep66" dBSequence_ref="DBSeq33567" id="PepEv_33858_66_292"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1472 <PeptideEvidence isDecoy="false" post="-" pre="K" end="305" start="292" peptide_ref="Pep66" dBSequence_ref="DBSeq44545" id="PepEv_44836_66_292"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1473 <PeptideEvidence isDecoy="true" post="R" pre="K" end="378" start="360" peptide_ref="Pep67" dBSequence_ref="DBSeq104353" id="PepEv_104712_67_360"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1474 <PeptideEvidence isDecoy="true" post="R" pre="K" end="378" start="360" peptide_ref="Pep67" dBSequence_ref="DBSeq107227" id="PepEv_107586_67_360"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1475 <PeptideEvidence isDecoy="true" post="R" pre="K" end="378" start="360" peptide_ref="Pep67" dBSequence_ref="DBSeq108359" id="PepEv_108718_67_360"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1476 <PeptideEvidence isDecoy="true" post="R" pre="K" end="378" start="360" peptide_ref="Pep67" dBSequence_ref="DBSeq109459" id="PepEv_109818_67_360"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1477 <PeptideEvidence isDecoy="false" post="N" pre="K" end="741" start="723" peptide_ref="Pep68" dBSequence_ref="DBSeq48378" id="PepEv_49100_68_723"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1478 <PeptideEvidence isDecoy="false" post="N" pre="K" end="773" start="755" peptide_ref="Pep68" dBSequence_ref="DBSeq51252" id="PepEv_52006_68_755"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1479 <PeptideEvidence isDecoy="false" post="N" pre="K" end="741" start="723" peptide_ref="Pep68" dBSequence_ref="DBSeq52384" id="PepEv_53106_68_723"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1480 <PeptideEvidence isDecoy="false" post="N" pre="K" end="741" start="723" peptide_ref="Pep68" dBSequence_ref="DBSeq53484" id="PepEv_54206_68_723"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1481 <PeptideEvidence isDecoy="true" post="Q" pre="K" end="91" start="73" peptide_ref="Pep69" dBSequence_ref="DBSeq89236" id="PepEv_89308_69_73"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1482 <PeptideEvidence isDecoy="true" post="Q" pre="K" end="167" start="149" peptide_ref="Pep69" dBSequence_ref="DBSeq89236" id="PepEv_89384_69_149"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1483 <PeptideEvidence isDecoy="true" post="Q" pre="K" end="243" start="225" peptide_ref="Pep69" dBSequence_ref="DBSeq89236" id="PepEv_89460_69_225"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1484 <PeptideEvidence isDecoy="true" post="Q" pre="K" end="91" start="73" peptide_ref="Pep69" dBSequence_ref="DBSeq89542" id="PepEv_89614_69_73"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1485 <PeptideEvidence isDecoy="true" post="Q" pre="K" end="167" start="149" peptide_ref="Pep69" dBSequence_ref="DBSeq89542" id="PepEv_89690_69_149"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1486 <PeptideEvidence isDecoy="true" post="Q" pre="K" end="243" start="225" peptide_ref="Pep69" dBSequence_ref="DBSeq89542" id="PepEv_89766_69_225"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1487 <PeptideEvidence isDecoy="true" post="Q" pre="K" end="91" start="73" peptide_ref="Pep69" dBSequence_ref="DBSeq100520" id="PepEv_100592_69_73"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1488 <PeptideEvidence isDecoy="true" post="Q" pre="K" end="167" start="149" peptide_ref="Pep69" dBSequence_ref="DBSeq100520" id="PepEv_100668_69_149"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1489 <PeptideEvidence isDecoy="true" post="Q" pre="K" end="243" start="225" peptide_ref="Pep69" dBSequence_ref="DBSeq100520" id="PepEv_100744_69_225"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1490 <PeptideEvidence isDecoy="true" post="Q" pre="K" end="96" start="78" peptide_ref="Pep69" dBSequence_ref="DBSeq101624" id="PepEv_101701_69_78"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1491 <PeptideEvidence isDecoy="true" post="Q" pre="K" end="172" start="154" peptide_ref="Pep69" dBSequence_ref="DBSeq101624" id="PepEv_101777_69_154"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1492 <PeptideEvidence isDecoy="true" post="Q" pre="K" end="248" start="230" peptide_ref="Pep69" dBSequence_ref="DBSeq101624" id="PepEv_101853_69_230"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1493 <PeptideEvidence isDecoy="true" post="Q" pre="K" end="324" start="306" peptide_ref="Pep69" dBSequence_ref="DBSeq101624" id="PepEv_101929_69_306"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1494 <PeptideEvidence isDecoy="true" post="Q" pre="K" end="400" start="382" peptide_ref="Pep69" dBSequence_ref="DBSeq101624" id="PepEv_102005_69_382"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1495 <PeptideEvidence isDecoy="true" post="Q" pre="K" end="476" start="458" peptide_ref="Pep69" dBSequence_ref="DBSeq101624" id="PepEv_102081_69_458"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1496 <PeptideEvidence isDecoy="true" post="Q" pre="K" end="552" start="534" peptide_ref="Pep69" dBSequence_ref="DBSeq101624" id="PepEv_102157_69_534"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1497 <PeptideEvidence isDecoy="true" post="Q" pre="K" end="628" start="610" peptide_ref="Pep69" dBSequence_ref="DBSeq101624" id="PepEv_102233_69_610"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1498 <PeptideEvidence isDecoy="false" post="T" pre="K" end="82" start="64" peptide_ref="Pep70" dBSequence_ref="DBSeq33261" id="PepEv_33324_70_64"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1499 <PeptideEvidence isDecoy="false" post="T" pre="K" end="158" start="140" peptide_ref="Pep70" dBSequence_ref="DBSeq33261" id="PepEv_33400_70_140"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1500 <PeptideEvidence isDecoy="false" post="T" pre="K" end="234" start="216" peptide_ref="Pep70" dBSequence_ref="DBSeq33261" id="PepEv_33476_70_216"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1501 <PeptideEvidence isDecoy="false" post="T" pre="K" end="82" start="64" peptide_ref="Pep70" dBSequence_ref="DBSeq33567" id="PepEv_33630_70_64"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1502 <PeptideEvidence isDecoy="false" post="T" pre="K" end="158" start="140" peptide_ref="Pep70" dBSequence_ref="DBSeq33567" id="PepEv_33706_70_140"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1503 <PeptideEvidence isDecoy="false" post="T" pre="K" end="234" start="216" peptide_ref="Pep70" dBSequence_ref="DBSeq33567" id="PepEv_33782_70_216"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1504 <PeptideEvidence isDecoy="false" post="T" pre="K" end="82" start="64" peptide_ref="Pep70" dBSequence_ref="DBSeq44545" id="PepEv_44608_70_64"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1505 <PeptideEvidence isDecoy="false" post="T" pre="K" end="158" start="140" peptide_ref="Pep70" dBSequence_ref="DBSeq44545" id="PepEv_44684_70_140"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1506 <PeptideEvidence isDecoy="false" post="T" pre="K" end="234" start="216" peptide_ref="Pep70" dBSequence_ref="DBSeq44545" id="PepEv_44760_70_216"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1507 <PeptideEvidence isDecoy="false" post="T" pre="K" end="82" start="64" peptide_ref="Pep70" dBSequence_ref="DBSeq45649" id="PepEv_45712_70_64"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1508 <PeptideEvidence isDecoy="false" post="T" pre="K" end="158" start="140" peptide_ref="Pep70" dBSequence_ref="DBSeq45649" id="PepEv_45788_70_140"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1509 <PeptideEvidence isDecoy="false" post="T" pre="K" end="234" start="216" peptide_ref="Pep70" dBSequence_ref="DBSeq45649" id="PepEv_45864_70_216"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1510 <PeptideEvidence isDecoy="false" post="T" pre="K" end="310" start="292" peptide_ref="Pep70" dBSequence_ref="DBSeq45649" id="PepEv_45940_70_292"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1511 <PeptideEvidence isDecoy="false" post="T" pre="K" end="386" start="368" peptide_ref="Pep70" dBSequence_ref="DBSeq45649" id="PepEv_46016_70_368"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1512 <PeptideEvidence isDecoy="false" post="T" pre="K" end="462" start="444" peptide_ref="Pep70" dBSequence_ref="DBSeq45649" id="PepEv_46092_70_444"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1513 <PeptideEvidence isDecoy="false" post="T" pre="K" end="538" start="520" peptide_ref="Pep70" dBSequence_ref="DBSeq45649" id="PepEv_46168_70_520"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1514 <PeptideEvidence isDecoy="false" post="T" pre="K" end="614" start="596" peptide_ref="Pep70" dBSequence_ref="DBSeq45649" id="PepEv_46244_70_596"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1515 <PeptideEvidence isDecoy="false" post="Q" pre="K" end="848" start="831" peptide_ref="Pep71" dBSequence_ref="DBSeq9505" id="PepEv_10335_71_831"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1516 <PeptideEvidence isDecoy="false" post="Q" pre="K" end="848" start="831" peptide_ref="Pep71" dBSequence_ref="DBSeq17116" id="PepEv_17946_71_831"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1517 <PeptideEvidence isDecoy="false" post="Q" pre="K" end="772" start="755" peptide_ref="Pep71" dBSequence_ref="DBSeq38514" id="PepEv_39268_71_755"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1518 </SequenceCollection>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1519 <AnalysisCollection xmlns="http://psidev.info/psi/pi/mzIdentML/1.1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1520 <SpectrumIdentification spectrumIdentificationList_ref="SI_LIST_1" spectrumIdentificationProtocol_ref="SearchProtocol_1" id="SpecIdent_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1521 <InputSpectra spectraData_ref="SID_1"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1522 <SearchDatabaseRef searchDatabase_ref="SearchDB_1"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1523 </SpectrumIdentification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1524 </AnalysisCollection>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1525 <AnalysisProtocolCollection xmlns="http://psidev.info/psi/pi/mzIdentML/1.1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1526 <SpectrumIdentificationProtocol analysisSoftware_ref="ID_software" id="SearchProtocol_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1527 <SearchType>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1528 <cvParam accession="MS:1001083" cvRef="PSI-MS" name="ms-ms search"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1529 </SearchType>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1530 <AdditionalSearchParams>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1531 <cvParam accession="MS:1001211" cvRef="PSI-MS" name="parent mass type mono"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1532 <cvParam accession="MS:1001256" cvRef="PSI-MS" name="fragment mass type mono"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1533 <userParam value="true" name="TargetDecoyApproach"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1534 <userParam value="-1" name="MinIsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1535 <userParam value="0" name="MaxIsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1536 <userParam value="HCD" name="FragmentMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1537 <userParam value="QExactive" name="Instrument"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1538 <userParam value="iTRAQ" name="Protocol"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1539 <userParam value="2" name="NumTolerableTermini"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1540 <userParam value="2" name="NumMatchesPerSpec"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1541 <userParam value="2" name="MaxNumModifications"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1542 <userParam value="10" name="MinPepLength"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1543 <userParam value="20" name="MaxPepLength"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1544 <userParam value="2" name="MinCharge"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1545 <userParam value="6" name="MaxCharge"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1546 </AdditionalSearchParams>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1547 <ModificationParams>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1548 <SearchModification residues="C" massDelta="57.021465" fixedMod="true">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1549 <cvParam accession="UNIMOD:4" cvRef="UNIMOD" name="Carbamidomethyl"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1550 </SearchModification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1551 <SearchModification residues="." massDelta="144.10207" fixedMod="true">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1552 <SpecificityRules>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1553 <cvParam accession="MS:1001189" cvRef="PSI-MS" name="modification specificity N-term"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1554 </SpecificityRules>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1555 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1556 </SearchModification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1557 <SearchModification residues="K" massDelta="144.10207" fixedMod="true">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1558 <cvParam accession="UNIMOD:214" cvRef="UNIMOD" name="iTRAQ4plex"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1559 </SearchModification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1560 <SearchModification residues="M" massDelta="15.994915" fixedMod="false">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1561 <cvParam accession="UNIMOD:35" cvRef="UNIMOD" name="Oxidation"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1562 </SearchModification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1563 <SearchModification residues="Q" massDelta="-17.026548" fixedMod="false">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1564 <SpecificityRules>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1565 <cvParam accession="MS:1001189" cvRef="PSI-MS" name="modification specificity N-term"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1566 </SpecificityRules>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1567 <cvParam accession="UNIMOD:28" cvRef="UNIMOD" name="Gln-&gt;pyro-Glu"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1568 </SearchModification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1569 <SearchModification residues="G" massDelta="-58.005478" fixedMod="false">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1570 <SpecificityRules>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1571 <cvParam accession="MS:1001190" cvRef="PSI-MS" name="modification specificity C-term"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1572 </SpecificityRules>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1573 <cvParam accession="UNIMOD:822" cvRef="UNIMOD" name="Gly-loss+Amide"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1574 </SearchModification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1575 <SearchModification residues="C" massDelta="343.0318" fixedMod="false">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1576 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1577 </SearchModification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1578 <SearchModification residues="S" massDelta="343.0318" fixedMod="false">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1579 <cvParam accession="UNIMOD:849" cvRef="UNIMOD" name="cGMP"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1580 </SearchModification>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1581 </ModificationParams>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1582 <Enzymes>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1583 <Enzyme missedCleavages="1000" semiSpecific="false" id="LysC">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1584 <EnzymeName>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1585 <cvParam accession="MS:1001309" cvRef="PSI-MS" name="Lys-C"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1586 </EnzymeName>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1587 </Enzyme>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1588 </Enzymes>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1589 <ParentTolerance>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1590 <cvParam accession="MS:1001412" cvRef="PSI-MS" unitCvRef="UO" unitName="dalton" unitAccession="UO:0000221" value="0.02" name="search tolerance plus value"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1591 <cvParam accession="MS:1001413" cvRef="PSI-MS" unitCvRef="UO" unitName="dalton" unitAccession="UO:0000221" value="0.02" name="search tolerance minus value"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1592 </ParentTolerance>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1593 <Threshold>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1594 <cvParam accession="MS:1001494" cvRef="PSI-MS" name="no threshold"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1595 </Threshold>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1596 </SpectrumIdentificationProtocol>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1597 </AnalysisProtocolCollection>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1598 <DataCollection xmlns="http://psidev.info/psi/pi/mzIdentML/1.1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1599 <Inputs>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1600 <SearchDatabase numDatabaseSequences="144" location="/tmp/tmpLUdxSj/job_working_directory/000/6/cow.protein.PRG2012-subset.fasta" id="SearchDB_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1601 <FileFormat>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1602 <cvParam accession="MS:1001348" cvRef="PSI-MS" name="FASTA format"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1603 </FileFormat>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1604 <DatabaseName>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1605 <userParam name="cow.protein.PRG2012-subset.fasta"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1606 </DatabaseName>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1607 <cvParam accession="MS:1001197" cvRef="PSI-MS" name="DB composition target+decoy"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1608 <cvParam accession="MS:1001283" cvRef="PSI-MS" value="^XXX" name="decoy DB accession regexp"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1609 <cvParam accession="MS:1001195" cvRef="PSI-MS" name="decoy DB type reverse"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1610 </SearchDatabase>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1611 <SpectraData location="/tmp/tmpLUdxSj/job_working_directory/000/6/201208-378803.mzML" name="201208-378803.mzML" id="SID_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1612 <FileFormat>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1613 <cvParam accession="MS:1000584" cvRef="PSI-MS" name="mzML file"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1614 </FileFormat>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1615 <SpectrumIDFormat>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1616 <cvParam accession="MS:1000770" cvRef="PSI-MS" name="WIFF nativeID format"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1617 </SpectrumIDFormat>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1618 </SpectraData>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1619 </Inputs>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1620 <AnalysisData>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1621 <SpectrumIdentificationList id="SI_LIST_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1622 <FragmentationTable>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1623 <Measure id="Measure_MZ">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1624 <cvParam accession="MS:1001225" cvRef="PSI-MS" unitCvRef="PSI-MS" unitName="m/z" unitAccession="MS:1000040" name="product ion m/z"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1625 </Measure>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1626 </FragmentationTable>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1627 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1222 experiment=2" id="SIR_83">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1628 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep1" calculatedMassToCharge="582.2879638671875" experimentalMassToCharge="582.2852172851562" chargeState="6" id="SII_83_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1629 <PeptideEvidenceRef peptideEvidence_ref="PepEv_44077_1_141"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1630 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-18" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1631 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="101" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1632 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="1.2806841E-4" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1633 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="5.2595134" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1634 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="0.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1635 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="0.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1636 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1637 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1638 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1639 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1640 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1641 <userParam value="995.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1642 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1643 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep2" calculatedMassToCharge="582.2885131835938" experimentalMassToCharge="582.2852172851562" chargeState="3" id="SII_83_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1644 <PeptideEvidenceRef peptideEvidence_ref="PepEv_71368_2_5889"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1645 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-22" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1646 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="81" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1647 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="6.9369684E-4" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1648 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="27.544622" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1649 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1650 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1651 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1652 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1653 <userParam value="0.0020100502" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1654 <userParam value="0.0020100502" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1655 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1656 <userParam value="995.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1657 <userParam value="1" name="NumMatchedMainIons"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1658 <userParam value="4.328511" name="MeanErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1659 <userParam value="0.0" name="StdevErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1660 <userParam value="4.328511" name="MeanErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1661 <userParam value="0.0" name="StdevErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1662 <userParam value="4.328511" name="MeanRelErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1663 <userParam value="0.0" name="StdevRelErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1664 <userParam value="4.328511" name="MeanRelErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1665 <userParam value="0.0" name="StdevRelErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1666 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1667 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1668 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1214 experiment=4" id="SIR_60">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1669 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep3" calculatedMassToCharge="545.8862915039062" experimentalMassToCharge="545.8875732421875" chargeState="5" id="SII_60_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1670 <PeptideEvidenceRef peptideEvidence_ref="PepEv_28138_3_482"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1671 <PeptideEvidenceRef peptideEvidence_ref="PepEv_28954_3_482"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1672 <PeptideEvidenceRef peptideEvidence_ref="PepEv_29766_3_482"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1673 <PeptideEvidenceRef peptideEvidence_ref="PepEv_37992_3_482"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1674 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-3" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1675 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="110" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1676 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="1.5377921E-4" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1677 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="6.202992" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1678 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="0.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1679 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="0.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1680 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1681 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1682 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1683 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1684 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1685 <userParam value="2824.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1686 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1687 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep4" calculatedMassToCharge="545.8897094726562" experimentalMassToCharge="545.8875732421875" chargeState="5" id="SII_60_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1688 <PeptideEvidenceRef peptideEvidence_ref="PepEv_63289_4_264"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1689 <PeptideEvidenceRef peptideEvidence_ref="PepEv_64144_4_264"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1690 <PeptideEvidenceRef peptideEvidence_ref="PepEv_91411_4_264"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1691 <PeptideEvidenceRef peptideEvidence_ref="PepEv_92266_4_264"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1692 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-19" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1693 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="110" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1694 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0030467864" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1695 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="122.898224" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1696 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1697 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1698 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1699 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1700 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1701 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1702 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1703 <userParam value="2824.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1704 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1705 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1706 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1207 experiment=2" id="SIR_35">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1707 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep5" calculatedMassToCharge="540.5006713867188" experimentalMassToCharge="540.2457885742188" chargeState="4" id="SII_35_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1708 <PeptideEvidenceRef peptideEvidence_ref="PepEv_104719_5_367"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1709 <PeptideEvidenceRef peptideEvidence_ref="PepEv_107593_5_367"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1710 <PeptideEvidenceRef peptideEvidence_ref="PepEv_108725_5_367"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1711 <PeptideEvidenceRef peptideEvidence_ref="PepEv_109825_5_367"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1712 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-10" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1713 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="88" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1714 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="1.7893981E-4" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1715 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="7.1348667" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1716 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="0.5" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1717 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="0.5" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1718 <userParam value="-1" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1719 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1720 <userParam value="0.0025316456" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1721 <userParam value="0.0025316456" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1722 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1723 <userParam value="790.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1724 <userParam value="1" name="NumMatchedMainIons"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1725 <userParam value="15.702927" name="MeanErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1726 <userParam value="0.0" name="StdevErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1727 <userParam value="15.702927" name="MeanErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1728 <userParam value="0.0" name="StdevErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1729 <userParam value="-15.702927" name="MeanRelErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1730 <userParam value="0.0" name="StdevRelErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1731 <userParam value="-15.702927" name="MeanRelErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1732 <userParam value="0.0" name="StdevRelErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1733 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1734 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep6" calculatedMassToCharge="540.5006713867188" experimentalMassToCharge="540.2457885742188" chargeState="4" id="SII_35_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1735 <PeptideEvidenceRef peptideEvidence_ref="PepEv_49100_6_723"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1736 <PeptideEvidenceRef peptideEvidence_ref="PepEv_52006_6_755"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1737 <PeptideEvidenceRef peptideEvidence_ref="PepEv_53106_6_723"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1738 <PeptideEvidenceRef peptideEvidence_ref="PepEv_54206_6_723"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1739 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-12" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1740 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="88" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1741 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="2.7536333E-4" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1742 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="10.979562" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1743 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1744 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1745 <userParam value="-1" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1746 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1747 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1748 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1749 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1750 <userParam value="790.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1751 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1752 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1753 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1219 experiment=2" id="SIR_77">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1754 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep7" calculatedMassToCharge="487.2474365234375" experimentalMassToCharge="487.2433166503906" chargeState="4" id="SII_77_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1755 <PeptideEvidenceRef peptideEvidence_ref="PepEv_64931_7_196"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1756 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-11" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1757 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="65" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1758 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="1.9136534E-4" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1759 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="7.5652456" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1760 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1761 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1762 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1763 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1764 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1765 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1766 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1767 <userParam value="2669.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1768 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1769 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep8" calculatedMassToCharge="487.2474365234375" experimentalMassToCharge="487.2433166503906" chargeState="4" id="SII_77_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1770 <PeptideEvidenceRef peptideEvidence_ref="PepEv_9145_8_385"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1771 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-12" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1772 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="65" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1773 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="2.3838083E-4" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1774 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="9.423909" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1775 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1776 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1777 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1778 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1779 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1780 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1781 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1782 <userParam value="2669.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1783 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1784 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1785 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1223 experiment=3" id="SIR_85">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1786 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep9" calculatedMassToCharge="478.4933776855469" experimentalMassToCharge="478.24365234375" chargeState="4" id="SII_85_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1787 <PeptideEvidenceRef peptideEvidence_ref="PepEv_72048_9_6569"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1788 <PeptideEvidenceRef peptideEvidence_ref="PepEv_77549_9_4459"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1789 <PeptideEvidenceRef peptideEvidence_ref="PepEv_98947_9_4459"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1790 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-13" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1791 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="69" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1792 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="2.3242636E-4" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1793 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="9.188512" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1794 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1795 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1796 <userParam value="-1" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1797 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1798 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1799 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1800 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1801 <userParam value="260.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1802 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1803 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep10" calculatedMassToCharge="478.4933776855469" experimentalMassToCharge="478.24365234375" chargeState="4" id="SII_85_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1804 <PeptideEvidenceRef peptideEvidence_ref="PepEv_72048_10_6569"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1805 <PeptideEvidenceRef peptideEvidence_ref="PepEv_77549_10_4459"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1806 <PeptideEvidenceRef peptideEvidence_ref="PepEv_98947_10_4459"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1807 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-21" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1808 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="69" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1809 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0012980293" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1810 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="51.314995" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1811 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1812 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1813 <userParam value="-1" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1814 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1815 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1816 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1817 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1818 <userParam value="260.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1819 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1820 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1821 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1214 experiment=5" id="SIR_61">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1822 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep11" calculatedMassToCharge="519.994140625" experimentalMassToCharge="519.6590576171875" chargeState="3" id="SII_61_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1823 <PeptideEvidenceRef peptideEvidence_ref="PepEv_67650_11_2171"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1824 <PeptideEvidenceRef peptideEvidence_ref="PepEv_75191_11_2101"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1825 <PeptideEvidenceRef peptideEvidence_ref="PepEv_96589_11_2101"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1826 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-12" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1827 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="47" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1828 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="2.74489E-4" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1829 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="10.851374" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1830 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1831 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1832 <userParam value="-1" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1833 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1834 <userParam value="0.004137931" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1835 <userParam value="0.004137931" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1836 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1837 <userParam value="725.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1838 <userParam value="1" name="NumMatchedMainIons"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1839 <userParam value="17.95661" name="MeanErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1840 <userParam value="0.0" name="StdevErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1841 <userParam value="17.95661" name="MeanErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1842 <userParam value="0.0" name="StdevErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1843 <userParam value="17.95661" name="MeanRelErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1844 <userParam value="0.0" name="StdevRelErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1845 <userParam value="17.95661" name="MeanRelErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1846 <userParam value="0.0" name="StdevRelErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1847 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1848 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep12" calculatedMassToCharge="519.994140625" experimentalMassToCharge="519.6590576171875" chargeState="3" id="SII_61_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1849 <PeptideEvidenceRef peptideEvidence_ref="PepEv_14936_12_5432"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1850 <PeptideEvidenceRef peptideEvidence_ref="PepEv_20505_12_3390"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1851 <PeptideEvidenceRef peptideEvidence_ref="PepEv_41827_12_3314"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1852 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-23" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1853 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="47" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1854 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.002920274" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1855 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="115.44719" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1856 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1857 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1858 <userParam value="-1" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1859 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1860 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1861 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1862 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1863 <userParam value="725.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1864 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1865 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1866 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1580 experiment=2" id="SIR_106">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1867 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep13" calculatedMassToCharge="533.2630615234375" experimentalMassToCharge="533.2622680664062" chargeState="6" id="SII_106_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1868 <PeptideEvidenceRef peptideEvidence_ref="PepEv_66840_13_1361"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1869 <PeptideEvidenceRef peptideEvidence_ref="PepEv_74381_13_1291"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1870 <PeptideEvidenceRef peptideEvidence_ref="PepEv_95779_13_1291"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1871 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-28" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1872 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="48" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1873 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="2.8399474E-4" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1874 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="11.622201" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1875 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1876 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1877 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1878 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1879 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1880 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1881 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1882 <userParam value="257.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1883 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1884 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep14" calculatedMassToCharge="533.2630615234375" experimentalMassToCharge="533.2622680664062" chargeState="6" id="SII_106_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1885 <PeptideEvidenceRef peptideEvidence_ref="PepEv_15737_14_6233"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1886 <PeptideEvidenceRef peptideEvidence_ref="PepEv_21306_14_4191"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1887 <PeptideEvidenceRef peptideEvidence_ref="PepEv_42628_14_4115"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1888 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-38" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1889 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="48" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1890 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0026143582" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1891 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="106.98999" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1892 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1893 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1894 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1895 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1896 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1897 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1898 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1899 <userParam value="257.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1900 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1901 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1902 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1200 experiment=3" id="SIR_22">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1903 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep15" calculatedMassToCharge="450.2066345214844" experimentalMassToCharge="450.2027587890625" chargeState="4" id="SII_22_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1904 <PeptideEvidenceRef peptideEvidence_ref="PepEv_15300_15_5796"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1905 <PeptideEvidenceRef peptideEvidence_ref="PepEv_20869_15_3754"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1906 <PeptideEvidenceRef peptideEvidence_ref="PepEv_42191_15_3678"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1907 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-11" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1908 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="54" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1909 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="3.3568923E-4" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1910 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="13.2708025" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1911 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1912 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1913 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1914 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1915 <userParam value="0.001396648" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1916 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1917 <userParam value="0.001396648" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1918 <userParam value="716.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1919 <userParam value="1" name="NumMatchedMainIons"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1920 <userParam value="2.1449564" name="MeanErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1921 <userParam value="0.0" name="StdevErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1922 <userParam value="2.1449564" name="MeanErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1923 <userParam value="0.0" name="StdevErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1924 <userParam value="-2.1449564" name="MeanRelErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1925 <userParam value="0.0" name="StdevRelErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1926 <userParam value="-2.1449564" name="MeanRelErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1927 <userParam value="0.0" name="StdevRelErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1928 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1929 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep16" calculatedMassToCharge="450.2066345214844" experimentalMassToCharge="450.2027587890625" chargeState="4" id="SII_22_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1930 <PeptideEvidenceRef peptideEvidence_ref="PepEv_67286_16_1807"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1931 <PeptideEvidenceRef peptideEvidence_ref="PepEv_74827_16_1737"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1932 <PeptideEvidenceRef peptideEvidence_ref="PepEv_96225_16_1737"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1933 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-21" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1934 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="54" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1935 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.002777303" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1936 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="109.79513" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1937 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1938 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1939 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1940 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1941 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1942 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1943 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1944 <userParam value="716.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1945 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1946 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1947 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1212 experiment=4" id="SIR_52">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1948 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep17" calculatedMassToCharge="598.56005859375" experimentalMassToCharge="598.3059692382812" chargeState="4" id="SII_52_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1949 <PeptideEvidenceRef peptideEvidence_ref="PepEv_23356_17_74"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1950 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-18" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1951 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="68" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1952 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="4.2254035E-4" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1953 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="17.16866" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1954 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1955 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1956 <userParam value="-1" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1957 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1958 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1959 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1960 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1961 <userParam value="443.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1962 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1963 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep18" calculatedMassToCharge="598.3064575195312" experimentalMassToCharge="598.3059692382812" chargeState="5" id="SII_52_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1964 <PeptideEvidenceRef peptideEvidence_ref="PepEv_79533_18_69"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1965 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-22" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1966 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="77" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1967 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="5.293104E-4" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1968 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="21.661497" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1969 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1970 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1971 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1972 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1973 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1974 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1975 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1976 <userParam value="443.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1977 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1978 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1979 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1209 experiment=5" id="SIR_42">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1980 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep19" calculatedMassToCharge="404.1903381347656" experimentalMassToCharge="404.19219970703125" chargeState="6" id="SII_42_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1981 <PeptideEvidenceRef peptideEvidence_ref="PepEv_69666_19_4187"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1982 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-16" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1983 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="58" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1984 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="4.3619383E-4" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1985 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="17.529322" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1986 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1987 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1988 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1989 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1990 <userParam value="0.0051282053" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1991 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1992 <userParam value="0.0051282053" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1993 <userParam value="390.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1994 <userParam value="1" name="NumMatchedMainIons"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1995 <userParam value="7.1713767" name="MeanErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1996 <userParam value="0.0" name="StdevErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1997 <userParam value="7.1713767" name="MeanErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1998 <userParam value="0.0" name="StdevErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
1999 <userParam value="-7.1713767" name="MeanRelErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2000 <userParam value="0.0" name="StdevRelErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2001 <userParam value="-7.1713767" name="MeanRelErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2002 <userParam value="0.0" name="StdevRelErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2003 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2004 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep20" calculatedMassToCharge="404.3963623046875" experimentalMassToCharge="404.19219970703125" chargeState="5" id="SII_42_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2005 <PeptideEvidenceRef peptideEvidence_ref="PepEv_46658_20_37"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2006 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-18" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2007 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="39" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2008 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0010095721" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2009 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="40.08708" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2010 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2011 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2012 <userParam value="-1" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2013 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2014 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2015 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2016 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2017 <userParam value="390.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2018 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2019 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2020 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1210 experiment=2" id="SIR_43">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2021 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep21" calculatedMassToCharge="597.28857421875" experimentalMassToCharge="597.2890625" chargeState="3" id="SII_43_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2022 <PeptideEvidenceRef peptideEvidence_ref="PepEv_9921_21_417"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2023 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17532_21_417"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2024 <PeptideEvidenceRef peptideEvidence_ref="PepEv_38854_21_341"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2025 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-15" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2026 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="63" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2027 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="5.844457E-4" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2028 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="23.104893" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2029 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2030 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2031 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2032 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2033 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2034 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2035 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2036 <userParam value="1322.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2037 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2038 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep22" calculatedMassToCharge="597.2872314453125" experimentalMassToCharge="597.2890625" chargeState="3" id="SII_43_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2039 <PeptideEvidenceRef peptideEvidence_ref="PepEv_12571_22_3067"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2040 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-18" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2041 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="63" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2042 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0010981322" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2043 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="43.603535" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2044 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2045 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2046 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2047 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2048 <userParam value="7.564296E-4" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2049 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2050 <userParam value="7.564296E-4" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2051 <userParam value="1322.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2052 <userParam value="1" name="NumMatchedMainIons"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2053 <userParam value="10.069623" name="MeanErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2054 <userParam value="0.0" name="StdevErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2055 <userParam value="10.069623" name="MeanErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2056 <userParam value="0.0" name="StdevErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2057 <userParam value="-10.069623" name="MeanRelErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2058 <userParam value="0.0" name="StdevRelErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2059 <userParam value="-10.069623" name="MeanRelErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2060 <userParam value="0.0" name="StdevRelErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2061 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2062 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2063 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1201 experiment=4" id="SIR_26">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2064 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep23" calculatedMassToCharge="792.8295288085938" experimentalMassToCharge="792.8330078125" chargeState="4" id="SII_26_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2065 <PeptideEvidenceRef peptideEvidence_ref="PepEv_87518_23_451"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2066 <PeptideEvidenceRef peptideEvidence_ref="PepEv_88287_23_451"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2067 <PeptideEvidenceRef peptideEvidence_ref="PepEv_89000_23_451"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2068 <PeptideEvidenceRef peptideEvidence_ref="PepEv_104090_23_451"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2069 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-34" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2070 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="80" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2071 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="6.935409E-4" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2072 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="28.482338" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2073 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2074 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2075 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2076 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2077 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2078 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2079 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2080 <userParam value="121.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2081 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2082 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep24" calculatedMassToCharge="792.8295288085938" experimentalMassToCharge="792.8330078125" chargeState="4" id="SII_26_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2083 <PeptideEvidenceRef peptideEvidence_ref="PepEv_87518_24_451"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2084 <PeptideEvidenceRef peptideEvidence_ref="PepEv_88287_24_451"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2085 <PeptideEvidenceRef peptideEvidence_ref="PepEv_89000_24_451"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2086 <PeptideEvidenceRef peptideEvidence_ref="PepEv_104090_24_451"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2087 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-34" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2088 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="80" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2089 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="6.935409E-4" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2090 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="28.482338" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2091 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2092 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2093 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2094 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2095 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2096 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2097 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2098 <userParam value="121.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2099 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2100 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2101 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1209 experiment=4" id="SIR_41">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2102 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep25" calculatedMassToCharge="481.2019958496094" experimentalMassToCharge="481.1990051269531" chargeState="5" id="SII_41_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2103 <PeptideEvidenceRef peptideEvidence_ref="PepEv_72232_25_6753"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2104 <PeptideEvidenceRef peptideEvidence_ref="PepEv_77731_25_4641"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2105 <PeptideEvidenceRef peptideEvidence_ref="PepEv_99129_25_4641"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2106 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-24" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2107 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="76" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2108 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="7.588521E-4" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2109 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="30.13174" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2110 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2111 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2112 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2113 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2114 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2115 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2116 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2117 <userParam value="533.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2118 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2119 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep26" calculatedMassToCharge="481.2019958496094" experimentalMassToCharge="481.1990051269531" chargeState="5" id="SII_41_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2120 <PeptideEvidenceRef peptideEvidence_ref="PepEv_10353_26_849"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2121 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17964_26_849"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2122 <PeptideEvidenceRef peptideEvidence_ref="PepEv_39286_26_773"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2123 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-25" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2124 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="76" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2125 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="9.1667793E-4" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2126 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="36.398533" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2127 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2128 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2129 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2130 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2131 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2132 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2133 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2134 <userParam value="533.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2135 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2136 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2137 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1210 experiment=3" id="SIR_44">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2138 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep27" calculatedMassToCharge="461.9718322753906" experimentalMassToCharge="461.7162170410156" chargeState="4" id="SII_44_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2139 <PeptideEvidenceRef peptideEvidence_ref="PepEv_67926_27_2447"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2140 <PeptideEvidenceRef peptideEvidence_ref="PepEv_75467_27_2377"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2141 <PeptideEvidenceRef peptideEvidence_ref="PepEv_96865_27_2377"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2142 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-17" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2143 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="57" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2144 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="8.840973E-4" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2145 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="35.3913" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2146 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2147 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2148 <userParam value="-1" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2149 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2150 <userParam value="0.0044247787" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2151 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2152 <userParam value="0.0044247787" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2153 <userParam value="452.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2154 <userParam value="1" name="NumMatchedMainIons"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2155 <userParam value="16.15865" name="MeanErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2156 <userParam value="0.0" name="StdevErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2157 <userParam value="16.15865" name="MeanErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2158 <userParam value="0.0" name="StdevErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2159 <userParam value="16.15865" name="MeanRelErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2160 <userParam value="0.0" name="StdevRelErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2161 <userParam value="16.15865" name="MeanRelErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2162 <userParam value="0.0" name="StdevRelErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2163 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2164 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep28" calculatedMassToCharge="461.9718322753906" experimentalMassToCharge="461.7162170410156" chargeState="4" id="SII_44_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2165 <PeptideEvidenceRef peptideEvidence_ref="PepEv_14657_28_5153"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2166 <PeptideEvidenceRef peptideEvidence_ref="PepEv_20226_28_3111"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2167 <PeptideEvidenceRef peptideEvidence_ref="PepEv_41548_28_3035"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2168 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-30" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2169 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="57" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2170 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.007912856" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2171 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="316.75952" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2172 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2173 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2174 <userParam value="-1" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2175 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2176 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2177 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2178 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2179 <userParam value="452.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2180 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2181 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2182 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1213 experiment=3" id="SIR_55">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2183 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep29" calculatedMassToCharge="547.2781982421875" experimentalMassToCharge="547.2749633789062" chargeState="5" id="SII_55_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2184 <PeptideEvidenceRef peptideEvidence_ref="PepEv_31227_29_135"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2185 <PeptideEvidenceRef peptideEvidence_ref="PepEv_31940_29_79"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2186 <PeptideEvidenceRef peptideEvidence_ref="PepEv_47743_29_79"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2187 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-21" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2188 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="90" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2189 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.001027913" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2190 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="41.916237" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2191 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2192 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2193 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2194 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2195 <userParam value="0.0031120332" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2196 <userParam value="0.0031120332" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2197 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2198 <userParam value="964.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2199 <userParam value="1" name="NumMatchedMainIons"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2200 <userParam value="9.420783" name="MeanErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2201 <userParam value="0.0" name="StdevErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2202 <userParam value="9.420783" name="MeanErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2203 <userParam value="0.0" name="StdevErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2204 <userParam value="-9.420783" name="MeanRelErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2205 <userParam value="0.0" name="StdevRelErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2206 <userParam value="-9.420783" name="MeanRelErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2207 <userParam value="0.0" name="StdevRelErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2208 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2209 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep30" calculatedMassToCharge="547.2743530273438" experimentalMassToCharge="547.2749633789062" chargeState="4" id="SII_55_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2210 <PeptideEvidenceRef peptideEvidence_ref="PepEv_9972_30_468"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2211 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17583_30_468"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2212 <PeptideEvidenceRef peptideEvidence_ref="PepEv_38905_30_392"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2213 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-24" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2214 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="71" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2215 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0028073182" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2216 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="113.65147" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2217 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2218 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2219 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2220 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2221 <userParam value="0.0031120332" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2222 <userParam value="0.0031120332" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2223 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2224 <userParam value="964.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2225 <userParam value="1" name="NumMatchedMainIons"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2226 <userParam value="19.94787" name="MeanErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2227 <userParam value="0.0" name="StdevErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2228 <userParam value="19.94787" name="MeanErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2229 <userParam value="0.0" name="StdevErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2230 <userParam value="-19.94787" name="MeanRelErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2231 <userParam value="0.0" name="StdevRelErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2232 <userParam value="-19.94787" name="MeanRelErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2233 <userParam value="0.0" name="StdevRelErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2234 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2235 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2236 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1229 experiment=2" id="SIR_90">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2237 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep31" calculatedMassToCharge="522.8875732421875" experimentalMassToCharge="522.6893920898438" chargeState="5" id="SII_90_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2238 <PeptideEvidenceRef peptideEvidence_ref="PepEv_84474_31_27"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2239 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-20" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2240 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="73" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2241 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0010280317" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2242 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="41.618835" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2243 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2244 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2245 <userParam value="-1" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2246 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2247 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2248 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2249 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2250 <userParam value="817.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2251 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2252 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep32" calculatedMassToCharge="522.8875732421875" experimentalMassToCharge="522.6893920898438" chargeState="5" id="SII_90_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2253 <PeptideEvidenceRef peptideEvidence_ref="PepEv_29243_32_771"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2254 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-21" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2255 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="73" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2256 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0012420963" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2257 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="50.285023" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2258 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2259 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2260 <userParam value="-1" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2261 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2262 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2263 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2264 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2265 <userParam value="817.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2266 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2267 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2268 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1218 experiment=3" id="SIR_74">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2269 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep33" calculatedMassToCharge="471.414794921875" experimentalMassToCharge="471.2165222167969" chargeState="5" id="SII_74_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2270 <PeptideEvidenceRef peptideEvidence_ref="PepEv_104591_33_239"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2271 <PeptideEvidenceRef peptideEvidence_ref="PepEv_107465_33_239"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2272 <PeptideEvidenceRef peptideEvidence_ref="PepEv_108597_33_239"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2273 <PeptideEvidenceRef peptideEvidence_ref="PepEv_109697_33_239"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2274 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-26" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2275 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="71" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2276 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0014468122" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2277 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="58.572746" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2278 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2279 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2280 <userParam value="-1" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2281 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2282 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2283 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2284 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2285 <userParam value="504.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2286 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2287 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep34" calculatedMassToCharge="471.414794921875" experimentalMassToCharge="471.2165222167969" chargeState="5" id="SII_74_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2288 <PeptideEvidenceRef peptideEvidence_ref="PepEv_49224_34_847"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2289 <PeptideEvidenceRef peptideEvidence_ref="PepEv_52130_34_879"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2290 <PeptideEvidenceRef peptideEvidence_ref="PepEv_53230_34_847"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2291 <PeptideEvidenceRef peptideEvidence_ref="PepEv_54330_34_847"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2292 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-45" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2293 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="71" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2294 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.024579557" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2295 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="995.0788" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2296 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2297 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2298 <userParam value="-1" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2299 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2300 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2301 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2302 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2303 <userParam value="504.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2304 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2305 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2306 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1583 experiment=2" id="SIR_107">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2307 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep35" calculatedMassToCharge="487.2373962402344" experimentalMassToCharge="487.24053955078125" chargeState="5" id="SII_107_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2308 <PeptideEvidenceRef peptideEvidence_ref="PepEv_79867_35_18"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2309 <PeptideEvidenceRef peptideEvidence_ref="PepEv_102332_35_18"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2310 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-26" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2311 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="50" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2312 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0014620319" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2313 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="58.754673" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2314 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2315 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2316 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2317 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2318 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2319 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2320 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2321 <userParam value="441.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2322 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2323 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep36" calculatedMassToCharge="487.2373962402344" experimentalMassToCharge="487.24053955078125" chargeState="5" id="SII_107_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2324 <PeptideEvidenceRef peptideEvidence_ref="PepEv_23973_36_99"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2325 <PeptideEvidenceRef peptideEvidence_ref="PepEv_46438_36_99"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2326 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-33" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2327 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="50" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2328 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0052014035" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2329 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="209.0288" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2330 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2331 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2332 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2333 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2334 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2335 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2336 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2337 <userParam value="441.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2338 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2339 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2340 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1215 experiment=2" id="SIR_62">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2341 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep37" calculatedMassToCharge="605.8121948242188" experimentalMassToCharge="605.810546875" chargeState="4" id="SII_62_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2342 <PeptideEvidenceRef peptideEvidence_ref="PepEv_79541_37_77"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2343 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-23" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2344 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="86" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2345 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0014706878" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2346 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="58.873104" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2347 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2348 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2349 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2350 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2351 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2352 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2353 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2354 <userParam value="486.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2355 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2356 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep38" calculatedMassToCharge="606.0590209960938" experimentalMassToCharge="605.810546875" chargeState="4" id="SII_62_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2357 <PeptideEvidenceRef peptideEvidence_ref="PepEv_100309_38_398"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2358 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-27" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2359 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="86" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2360 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0029004393" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2361 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="116.55996" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2362 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2363 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2364 <userParam value="-1" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2365 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2366 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2367 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2368 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2369 <userParam value="486.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2370 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2371 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2372 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1196 experiment=2" id="SIR_15">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2373 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep39" calculatedMassToCharge="409.19036865234375" experimentalMassToCharge="409.1874694824219" chargeState="5" id="SII_15_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2374 <PeptideEvidenceRef peptideEvidence_ref="PepEv_10353_39_849"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2375 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17964_39_849"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2376 <PeptideEvidenceRef peptideEvidence_ref="PepEv_39286_39_773"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2377 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-22" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2378 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="56" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2379 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0015165305" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2380 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="60.216877" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2381 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2382 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2383 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2384 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2385 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2386 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2387 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2388 <userParam value="465.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2389 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2390 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep40" calculatedMassToCharge="409.19036865234375" experimentalMassToCharge="409.1874694824219" chargeState="5" id="SII_15_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2391 <PeptideEvidenceRef peptideEvidence_ref="PepEv_10353_40_849"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2392 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17964_40_849"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2393 <PeptideEvidenceRef peptideEvidence_ref="PepEv_39286_40_773"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2394 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-23" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2395 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="56" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2396 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0018105983" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2397 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="71.893425" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2398 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2399 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2400 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2401 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2402 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2403 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2404 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2405 <userParam value="465.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2406 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2407 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2408 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1213 experiment=5" id="SIR_57">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2409 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep41" calculatedMassToCharge="575.3076171875" experimentalMassToCharge="575.3018188476562" chargeState="3" id="SII_57_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2410 <PeptideEvidenceRef peptideEvidence_ref="PepEv_44236_41_300"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2411 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-22" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2412 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="59" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2413 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0015540735" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2414 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="61.437187" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2415 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2416 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2417 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2418 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2419 <userParam value="0.0014619883" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2420 <userParam value="0.0014619883" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2421 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2422 <userParam value="684.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2423 <userParam value="1" name="NumMatchedMainIons"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2424 <userParam value="12.832601" name="MeanErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2425 <userParam value="0.0" name="StdevErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2426 <userParam value="12.832601" name="MeanErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2427 <userParam value="0.0" name="StdevErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2428 <userParam value="12.832601" name="MeanRelErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2429 <userParam value="0.0" name="StdevRelErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2430 <userParam value="12.832601" name="MeanRelErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2431 <userParam value="0.0" name="StdevRelErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2432 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2433 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep42" calculatedMassToCharge="575.5001220703125" experimentalMassToCharge="575.3018188476562" chargeState="5" id="SII_57_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2434 <PeptideEvidenceRef peptideEvidence_ref="PepEv_10248_42_744"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2435 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17859_42_744"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2436 <PeptideEvidenceRef peptideEvidence_ref="PepEv_39181_42_668"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2437 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-25" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2438 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="90" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2439 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0017753326" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2440 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="72.135315" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2441 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2442 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2443 <userParam value="-1" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2444 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2445 <userParam value="0.00877193" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2446 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2447 <userParam value="0.00877193" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2448 <userParam value="684.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2449 <userParam value="2" name="NumMatchedMainIons"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2450 <userParam value="11.25018" name="MeanErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2451 <userParam value="5.709004" name="StdevErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2452 <userParam value="11.25018" name="MeanErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2453 <userParam value="5.709004" name="StdevErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2454 <userParam value="5.7090044" name="MeanRelErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2455 <userParam value="11.25018" name="StdevRelErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2456 <userParam value="5.7090044" name="MeanRelErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2457 <userParam value="11.25018" name="StdevRelErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2458 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2459 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2460 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1191 experiment=2" id="SIR_8">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2461 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep43" calculatedMassToCharge="435.96044921875" experimentalMassToCharge="435.7113037109375" chargeState="4" id="SII_8_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2462 <PeptideEvidenceRef peptideEvidence_ref="PepEv_79379_43_122"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2463 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-28" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2464 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="45" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2465 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.001760593" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2466 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="70.4783" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2467 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2468 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2469 <userParam value="-1" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2470 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2471 <userParam value="0.044554457" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2472 <userParam value="0.03217822" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2473 <userParam value="0.012376238" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2474 <userParam value="404.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2475 <userParam value="2" name="NumMatchedMainIons"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2476 <userParam value="19.003765" name="MeanErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2477 <userParam value="0.682242" name="StdevErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2478 <userParam value="19.003765" name="MeanErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2479 <userParam value="0.682242" name="StdevErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2480 <userParam value="-19.003765" name="MeanRelErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2481 <userParam value="0.682242" name="StdevRelErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2482 <userParam value="-19.003765" name="MeanRelErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2483 <userParam value="0.682242" name="StdevRelErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2484 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2485 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep44" calculatedMassToCharge="435.96044921875" experimentalMassToCharge="435.7113037109375" chargeState="4" id="SII_8_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2486 <PeptideEvidenceRef peptideEvidence_ref="PepEv_23356_44_74"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2487 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-36" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2488 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="45" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2489 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.005179537" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2490 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="207.34204" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2491 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2492 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2493 <userParam value="-1" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2494 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2495 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2496 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2497 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2498 <userParam value="404.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2499 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2500 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2501 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1211 experiment=2" id="SIR_46">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2502 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep45" calculatedMassToCharge="442.1789855957031" experimentalMassToCharge="442.1819763183594" chargeState="6" id="SII_46_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2503 <PeptideEvidenceRef peptideEvidence_ref="PepEv_44054_45_118"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2504 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-28" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2505 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="58" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2506 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.002249939" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2507 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="90.0673" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2508 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2509 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2510 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2511 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2512 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2513 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2514 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2515 <userParam value="558.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2516 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2517 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep46" calculatedMassToCharge="442.1789855957031" experimentalMassToCharge="442.1819763183594" chargeState="6" id="SII_46_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2518 <PeptideEvidenceRef peptideEvidence_ref="PepEv_100390_46_479"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2519 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-31" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2520 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="58" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2521 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0036442573" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2522 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="145.88327" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2523 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2524 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2525 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2526 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2527 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2528 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2529 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2530 <userParam value="558.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2531 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2532 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2533 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1216 experiment=2" id="SIR_65">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2534 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep47" calculatedMassToCharge="464.3798522949219" experimentalMassToCharge="464.21527099609375" chargeState="6" id="SII_65_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2535 <PeptideEvidenceRef peptideEvidence_ref="PepEv_84245_47_614"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2536 <PeptideEvidenceRef peptideEvidence_ref="PepEv_85057_47_610"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2537 <PeptideEvidenceRef peptideEvidence_ref="PepEv_85824_47_565"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2538 <PeptideEvidenceRef peptideEvidence_ref="PepEv_93910_47_425"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2539 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-25" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2540 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="71" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2541 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0023129396" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2542 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="92.9501" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2543 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2544 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2545 <userParam value="-1" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2546 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2547 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2548 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2549 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2550 <userParam value="905.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2551 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2552 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep48" calculatedMassToCharge="464.3798522949219" experimentalMassToCharge="464.21527099609375" chargeState="6" id="SII_65_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2553 <PeptideEvidenceRef peptideEvidence_ref="PepEv_27846_48_190"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2554 <PeptideEvidenceRef peptideEvidence_ref="PepEv_28662_48_190"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2555 <PeptideEvidenceRef peptideEvidence_ref="PepEv_29474_48_190"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2556 <PeptideEvidenceRef peptideEvidence_ref="PepEv_37700_48_190"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2557 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-29" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2558 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="71" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2559 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0046383836" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2560 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="186.40273" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2561 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2562 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2563 <userParam value="-1" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2564 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2565 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2566 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2567 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2568 <userParam value="905.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2569 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2570 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2571 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1218 experiment=2" id="SIR_73">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2572 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep49" calculatedMassToCharge="578.0166625976562" experimentalMassToCharge="577.770751953125" chargeState="4" id="SII_73_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2573 <PeptideEvidenceRef peptideEvidence_ref="PepEv_44037_49_101"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2574 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-24" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2575 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="78" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2576 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.002549831" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2577 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="103.60474" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2578 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2579 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2580 <userParam value="-1" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2581 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2582 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2583 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2584 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2585 <userParam value="939.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2586 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2587 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep50" calculatedMassToCharge="578.0166625976562" experimentalMassToCharge="577.770751953125" chargeState="4" id="SII_73_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2588 <PeptideEvidenceRef peptideEvidence_ref="PepEv_100403_50_492"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2589 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-40" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2590 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="78" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2591 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.025259368" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2592 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="1026.3386" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2593 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2594 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2595 <userParam value="-1" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2596 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2597 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2598 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2599 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2600 <userParam value="939.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2601 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2602 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2603 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1209 experiment=2" id="SIR_39">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2604 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep51" calculatedMassToCharge="452.25213623046875" experimentalMassToCharge="452.254638671875" chargeState="6" id="SII_39_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2605 <PeptideEvidenceRef peptideEvidence_ref="PepEv_13608_51_4104"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2606 <PeptideEvidenceRef peptideEvidence_ref="PepEv_19177_51_2062"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2607 <PeptideEvidenceRef peptideEvidence_ref="PepEv_40499_51_1986"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2608 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-24" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2609 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="71" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2610 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.002663105" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2611 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="109.3684" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2612 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2613 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2614 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2615 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2616 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2617 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2618 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2619 <userParam value="1024.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2620 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2621 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep52" calculatedMassToCharge="452.25213623046875" experimentalMassToCharge="452.254638671875" chargeState="6" id="SII_39_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2622 <PeptideEvidenceRef peptideEvidence_ref="PepEv_68968_52_3489"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2623 <PeptideEvidenceRef peptideEvidence_ref="PepEv_76509_52_3419"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2624 <PeptideEvidenceRef peptideEvidence_ref="PepEv_97907_52_3419"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2625 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-40" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2626 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="71" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2627 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.026686419" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2628 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="1095.9579" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2629 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2630 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2631 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2632 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2633 <userParam value="0.001953125" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2634 <userParam value="0.001953125" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2635 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2636 <userParam value="1024.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2637 <userParam value="1" name="NumMatchedMainIons"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2638 <userParam value="4.5456934" name="MeanErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2639 <userParam value="0.0" name="StdevErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2640 <userParam value="4.5456934" name="MeanErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2641 <userParam value="0.0" name="StdevErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2642 <userParam value="4.5456934" name="MeanRelErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2643 <userParam value="0.0" name="StdevRelErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2644 <userParam value="4.5456934" name="MeanRelErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2645 <userParam value="0.0" name="StdevRelErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2646 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2647 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2648 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1231 experiment=2" id="SIR_96">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2649 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep53" calculatedMassToCharge="490.4136657714844" experimentalMassToCharge="490.2488098144531" chargeState="6" id="SII_96_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2650 <PeptideEvidenceRef peptideEvidence_ref="PepEv_84474_53_27"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2651 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-26" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2652 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="104" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2653 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0031199101" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2654 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="126.30644" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2655 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2656 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2657 <userParam value="-1" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2658 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2659 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2660 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2661 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2662 <userParam value="611.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2663 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2664 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep54" calculatedMassToCharge="490.2491760253906" experimentalMassToCharge="490.2488098144531" chargeState="4" id="SII_96_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2665 <PeptideEvidenceRef peptideEvidence_ref="PepEv_10617_54_1113"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2666 <PeptideEvidenceRef peptideEvidence_ref="PepEv_18226_54_1111"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2667 <PeptideEvidenceRef peptideEvidence_ref="PepEv_39548_54_1035"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2668 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-26" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2669 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="72" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2670 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0040624393" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2671 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="162.6235" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2672 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2673 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2674 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2675 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2676 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2677 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2678 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2679 <userParam value="611.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2680 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2681 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2682 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1181 experiment=2" id="SIR_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2683 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep55" calculatedMassToCharge="506.7470397949219" experimentalMassToCharge="506.7447204589844" chargeState="6" id="SII_1_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2684 <PeptideEvidenceRef peptideEvidence_ref="PepEv_72160_55_6681"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2685 <PeptideEvidenceRef peptideEvidence_ref="PepEv_77661_55_4571"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2686 <PeptideEvidenceRef peptideEvidence_ref="PepEv_99059_55_4571"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2687 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-40" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2688 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="47" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2689 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0035317831" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2690 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="144.01906" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2691 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2692 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2693 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2694 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2695 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2696 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2697 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2698 <userParam value="159.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2699 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2700 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep56" calculatedMassToCharge="506.7470397949219" experimentalMassToCharge="506.7447204589844" chargeState="6" id="SII_1_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2701 <PeptideEvidenceRef peptideEvidence_ref="PepEv_72160_56_6681"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2702 <PeptideEvidenceRef peptideEvidence_ref="PepEv_77661_56_4571"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2703 <PeptideEvidenceRef peptideEvidence_ref="PepEv_99059_56_4571"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2704 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-40" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2705 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="47" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2706 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0035317831" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2707 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="144.01906" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2708 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2709 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2710 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2711 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2712 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2713 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2714 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2715 <userParam value="159.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2716 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2717 <SpectrumIdentificationItem passThreshold="true" rank="3" peptide_ref="Pep57" calculatedMassToCharge="506.7470397949219" experimentalMassToCharge="506.7447204589844" chargeState="6" id="SII_1_3">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2718 <PeptideEvidenceRef peptideEvidence_ref="PepEv_72160_57_6681"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2719 <PeptideEvidenceRef peptideEvidence_ref="PepEv_77661_57_4571"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2720 <PeptideEvidenceRef peptideEvidence_ref="PepEv_99059_57_4571"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2721 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-40" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2722 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="47" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2723 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0035317831" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2724 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="144.01906" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2725 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2726 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2727 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2728 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2729 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2730 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2731 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2732 <userParam value="159.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2733 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2734 <SpectrumIdentificationItem passThreshold="true" rank="4" peptide_ref="Pep58" calculatedMassToCharge="506.7470397949219" experimentalMassToCharge="506.7447204589844" chargeState="6" id="SII_1_4">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2735 <PeptideEvidenceRef peptideEvidence_ref="PepEv_72160_58_6681"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2736 <PeptideEvidenceRef peptideEvidence_ref="PepEv_77661_58_4571"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2737 <PeptideEvidenceRef peptideEvidence_ref="PepEv_99059_58_4571"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2738 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-40" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2739 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="47" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2740 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0035317831" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2741 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="144.01906" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2742 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2743 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2744 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2745 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2746 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2747 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2748 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2749 <userParam value="159.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2750 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2751 <SpectrumIdentificationItem passThreshold="true" rank="5" peptide_ref="Pep59" calculatedMassToCharge="506.7470397949219" experimentalMassToCharge="506.7447204589844" chargeState="6" id="SII_1_5">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2752 <PeptideEvidenceRef peptideEvidence_ref="PepEv_72160_59_6681"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2753 <PeptideEvidenceRef peptideEvidence_ref="PepEv_77661_59_4571"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2754 <PeptideEvidenceRef peptideEvidence_ref="PepEv_99059_59_4571"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2755 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-40" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2756 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="47" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2757 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0035317831" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2758 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="144.01906" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2759 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2760 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2761 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2762 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2763 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2764 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2765 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2766 <userParam value="159.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2767 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2768 <SpectrumIdentificationItem passThreshold="true" rank="6" peptide_ref="Pep60" calculatedMassToCharge="506.7470397949219" experimentalMassToCharge="506.7447204589844" chargeState="6" id="SII_1_6">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2769 <PeptideEvidenceRef peptideEvidence_ref="PepEv_72160_60_6681"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2770 <PeptideEvidenceRef peptideEvidence_ref="PepEv_77661_60_4571"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2771 <PeptideEvidenceRef peptideEvidence_ref="PepEv_99059_60_4571"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2772 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-40" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2773 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="47" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2774 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0035317831" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2775 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="144.01906" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2776 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2777 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2778 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2779 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2780 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2781 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2782 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2783 <userParam value="159.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2784 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2785 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2786 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1203 experiment=3" id="SIR_30">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2787 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep61" calculatedMassToCharge="520.2421264648438" experimentalMassToCharge="520.2384033203125" chargeState="5" id="SII_30_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2788 <PeptideEvidenceRef peptideEvidence_ref="PepEv_15741_61_6237"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2789 <PeptideEvidenceRef peptideEvidence_ref="PepEv_21310_61_4195"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2790 <PeptideEvidenceRef peptideEvidence_ref="PepEv_42632_61_4119"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2791 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-24" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2792 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="71" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2793 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.004421605" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2794 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="178.35426" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2795 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2796 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2797 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2798 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2799 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2800 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2801 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2802 <userParam value="495.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2803 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2804 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep62" calculatedMassToCharge="520.2421264648438" experimentalMassToCharge="520.2384033203125" chargeState="5" id="SII_30_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2805 <PeptideEvidenceRef peptideEvidence_ref="PepEv_66840_62_1361"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2806 <PeptideEvidenceRef peptideEvidence_ref="PepEv_74381_62_1291"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2807 <PeptideEvidenceRef peptideEvidence_ref="PepEv_95779_62_1291"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2808 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-29" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2809 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="71" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2810 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.008392359" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2811 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="338.52258" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2812 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2813 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2814 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2815 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2816 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2817 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2818 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2819 <userParam value="495.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2820 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2821 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2822 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1228 experiment=3" id="SIR_89">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2823 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep63" calculatedMassToCharge="606.2780151367188" experimentalMassToCharge="606.2748413085938" chargeState="5" id="SII_89_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2824 <PeptideEvidenceRef peptideEvidence_ref="PepEv_68343_63_2864"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2825 <PeptideEvidenceRef peptideEvidence_ref="PepEv_75884_63_2794"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2826 <PeptideEvidenceRef peptideEvidence_ref="PepEv_97282_63_2794"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2827 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-33" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2828 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="75" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2829 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0046888194" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2830 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="189.82216" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2831 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2832 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2833 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2834 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2835 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2836 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2837 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2838 <userParam value="336.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2839 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2840 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep64" calculatedMassToCharge="606.2780151367188" experimentalMassToCharge="606.2748413085938" chargeState="5" id="SII_89_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2841 <PeptideEvidenceRef peptideEvidence_ref="PepEv_14237_64_4733"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2842 <PeptideEvidenceRef peptideEvidence_ref="PepEv_19806_64_2691"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2843 <PeptideEvidenceRef peptideEvidence_ref="PepEv_41128_64_2615"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2844 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-35" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2845 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="75" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2846 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0064314604" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2847 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="260.37125" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2848 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2849 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2850 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2851 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2852 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2853 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2854 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2855 <userParam value="336.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2856 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2857 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2858 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1283 experiment=2" id="SIR_104">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2859 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep65" calculatedMassToCharge="591.3304443359375" experimentalMassToCharge="591.3255615234375" chargeState="3" id="SII_104_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2860 <PeptideEvidenceRef peptideEvidence_ref="PepEv_3312_65_1"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2861 <PeptideEvidenceRef peptideEvidence_ref="PepEv_27068_65_1"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2862 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-26" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2863 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="85" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2864 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.0048791072" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2865 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="195.31554" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2866 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2867 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2868 <userParam value="0" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2869 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2870 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2871 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2872 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2873 <userParam value="1072.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2874 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2875 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2876 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1223 experiment=2" id="SIR_84">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2877 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep66" calculatedMassToCharge="611.0167236328125" experimentalMassToCharge="610.7609252929688" chargeState="4" id="SII_84_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2878 <PeptideEvidenceRef peptideEvidence_ref="PepEv_3964_66_64"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2879 <PeptideEvidenceRef peptideEvidence_ref="PepEv_30451_66_64"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2880 <PeptideEvidenceRef peptideEvidence_ref="PepEv_33552_66_292"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2881 <PeptideEvidenceRef peptideEvidence_ref="PepEv_33858_66_292"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2882 <PeptideEvidenceRef peptideEvidence_ref="PepEv_44836_66_292"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2883 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-31" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2884 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="97" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2885 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.006540328" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2886 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="262.83615" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2887 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2888 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2889 <userParam value="-1" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2890 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2891 <userParam value="0.008274232" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2892 <userParam value="0.008274232" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2893 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2894 <userParam value="846.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2895 <userParam value="1" name="NumMatchedMainIons"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2896 <userParam value="13.573221" name="MeanErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2897 <userParam value="0.0" name="StdevErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2898 <userParam value="13.573221" name="MeanErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2899 <userParam value="0.0" name="StdevErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2900 <userParam value="13.573221" name="MeanRelErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2901 <userParam value="0.0" name="StdevRelErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2902 <userParam value="13.573221" name="MeanRelErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2903 <userParam value="0.0" name="StdevRelErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2904 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2905 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2906 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1281 experiment=2" id="SIR_103">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2907 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep67" calculatedMassToCharge="591.944091796875" experimentalMassToCharge="591.745361328125" chargeState="5" id="SII_103_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2908 <PeptideEvidenceRef peptideEvidence_ref="PepEv_104712_67_360"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2909 <PeptideEvidenceRef peptideEvidence_ref="PepEv_107586_67_360"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2910 <PeptideEvidenceRef peptideEvidence_ref="PepEv_108718_67_360"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2911 <PeptideEvidenceRef peptideEvidence_ref="PepEv_109818_67_360"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2912 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-35" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2913 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="110" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2914 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.009581658" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2915 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="392.11978" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2916 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2917 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2918 <userParam value="-1" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2919 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2920 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2921 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2922 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2923 <userParam value="571.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2924 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2925 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep68" calculatedMassToCharge="591.944091796875" experimentalMassToCharge="591.745361328125" chargeState="5" id="SII_103_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2926 <PeptideEvidenceRef peptideEvidence_ref="PepEv_49100_68_723"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2927 <PeptideEvidenceRef peptideEvidence_ref="PepEv_52006_68_755"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2928 <PeptideEvidenceRef peptideEvidence_ref="PepEv_53106_68_723"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2929 <PeptideEvidenceRef peptideEvidence_ref="PepEv_54206_68_723"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2930 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-40" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2931 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="110" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2932 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.018137826" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2933 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="742.27234" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2934 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2935 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2936 <userParam value="-1" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2937 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2938 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2939 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2940 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2941 <userParam value="571.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2942 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2943 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2944 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1213 experiment=2" id="SIR_54">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2945 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep69" calculatedMassToCharge="497.8994140625" experimentalMassToCharge="497.6971435546875" chargeState="5" id="SII_54_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2946 <PeptideEvidenceRef peptideEvidence_ref="PepEv_89308_69_73"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2947 <PeptideEvidenceRef peptideEvidence_ref="PepEv_89384_69_149"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2948 <PeptideEvidenceRef peptideEvidence_ref="PepEv_89460_69_225"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2949 <PeptideEvidenceRef peptideEvidence_ref="PepEv_89614_69_73"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2950 <PeptideEvidenceRef peptideEvidence_ref="PepEv_89690_69_149"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2951 <PeptideEvidenceRef peptideEvidence_ref="PepEv_89766_69_225"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2952 <PeptideEvidenceRef peptideEvidence_ref="PepEv_100592_69_73"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2953 <PeptideEvidenceRef peptideEvidence_ref="PepEv_100668_69_149"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2954 <PeptideEvidenceRef peptideEvidence_ref="PepEv_100744_69_225"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2955 <PeptideEvidenceRef peptideEvidence_ref="PepEv_101701_69_78"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2956 <PeptideEvidenceRef peptideEvidence_ref="PepEv_101777_69_154"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2957 <PeptideEvidenceRef peptideEvidence_ref="PepEv_101853_69_230"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2958 <PeptideEvidenceRef peptideEvidence_ref="PepEv_101929_69_306"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2959 <PeptideEvidenceRef peptideEvidence_ref="PepEv_102005_69_382"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2960 <PeptideEvidenceRef peptideEvidence_ref="PepEv_102081_69_458"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2961 <PeptideEvidenceRef peptideEvidence_ref="PepEv_102157_69_534"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2962 <PeptideEvidenceRef peptideEvidence_ref="PepEv_102233_69_610"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2963 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-35" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2964 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="80" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2965 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.011701179" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2966 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="478.85904" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2967 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2968 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2969 <userParam value="-1" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2970 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2971 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2972 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2973 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2974 <userParam value="1027.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2975 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2976 <SpectrumIdentificationItem passThreshold="true" rank="2" peptide_ref="Pep70" calculatedMassToCharge="497.8994140625" experimentalMassToCharge="497.6971435546875" chargeState="5" id="SII_54_2">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2977 <PeptideEvidenceRef peptideEvidence_ref="PepEv_33324_70_64"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2978 <PeptideEvidenceRef peptideEvidence_ref="PepEv_33400_70_140"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2979 <PeptideEvidenceRef peptideEvidence_ref="PepEv_33476_70_216"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2980 <PeptideEvidenceRef peptideEvidence_ref="PepEv_33630_70_64"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2981 <PeptideEvidenceRef peptideEvidence_ref="PepEv_33706_70_140"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2982 <PeptideEvidenceRef peptideEvidence_ref="PepEv_33782_70_216"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2983 <PeptideEvidenceRef peptideEvidence_ref="PepEv_44608_70_64"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2984 <PeptideEvidenceRef peptideEvidence_ref="PepEv_44684_70_140"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2985 <PeptideEvidenceRef peptideEvidence_ref="PepEv_44760_70_216"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2986 <PeptideEvidenceRef peptideEvidence_ref="PepEv_45712_70_64"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2987 <PeptideEvidenceRef peptideEvidence_ref="PepEv_45788_70_140"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2988 <PeptideEvidenceRef peptideEvidence_ref="PepEv_45864_70_216"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2989 <PeptideEvidenceRef peptideEvidence_ref="PepEv_45940_70_292"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2990 <PeptideEvidenceRef peptideEvidence_ref="PepEv_46016_70_368"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2991 <PeptideEvidenceRef peptideEvidence_ref="PepEv_46092_70_444"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2992 <PeptideEvidenceRef peptideEvidence_ref="PepEv_46168_70_520"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2993 <PeptideEvidenceRef peptideEvidence_ref="PepEv_46244_70_596"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2994 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-39" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2995 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="80" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2996 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.019098723" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2997 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="781.5961" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2998 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
2999 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3000 <userParam value="-1" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3001 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3002 <userParam value="9.7370986E-4" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3003 <userParam value="9.7370986E-4" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3004 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3005 <userParam value="1027.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3006 <userParam value="1" name="NumMatchedMainIons"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3007 <userParam value="1.8923733" name="MeanErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3008 <userParam value="0.0" name="StdevErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3009 <userParam value="1.8923733" name="MeanErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3010 <userParam value="0.0" name="StdevErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3011 <userParam value="-1.8923733" name="MeanRelErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3012 <userParam value="0.0" name="StdevRelErrorAll"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3013 <userParam value="-1.8923733" name="MeanRelErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3014 <userParam value="0.0" name="StdevRelErrorTop7"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3015 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3016 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3017 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="sample=1 period=1 cycle=1428 experiment=2" id="SIR_105">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3018 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep71" calculatedMassToCharge="585.5540161132812" experimentalMassToCharge="585.301513671875" chargeState="4" id="SII_105_1">
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3019 <PeptideEvidenceRef peptideEvidence_ref="PepEv_10335_71_831"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3020 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17946_71_831"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3021 <PeptideEvidenceRef peptideEvidence_ref="PepEv_39268_71_755"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3022 <cvParam accession="MS:1002049" cvRef="PSI-MS" value="-47" name="MS-GF:RawScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3023 <cvParam accession="MS:1002050" cvRef="PSI-MS" value="93" name="MS-GF:DeNovoScore"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3024 <cvParam accession="MS:1002052" cvRef="PSI-MS" value="0.02323054" name="MS-GF:SpecEValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3025 <cvParam accession="MS:1002053" cvRef="PSI-MS" value="947.295" name="MS-GF:EValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3026 <cvParam accession="MS:1002054" cvRef="PSI-MS" value="1.0" name="MS-GF:QValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3027 <cvParam accession="MS:1002055" cvRef="PSI-MS" value="1.0" name="MS-GF:PepQValue"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3028 <userParam value="-1" name="IsotopeError"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3029 <userParam value="HCD" name="AssumedDissociationMethod"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3030 <userParam value="0.0" name="ExplainedIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3031 <userParam value="0.0" name="NTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3032 <userParam value="0.0" name="CTermIonCurrentRatio"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3033 <userParam value="330.0" name="MS2IonCurrent"/>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3034 </SpectrumIdentificationItem>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3035 </SpectrumIdentificationResult>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3036 </SpectrumIdentificationList>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3037 </AnalysisData>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3038 </DataCollection>
ee56530a559f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit bdb474693831a3375db79755e88641ad32b3b4e6
galaxyp
parents:
diff changeset
3039 </MzIdentML>