Mercurial > repos > galaxyp > openms_falsediscoveryrate

diff FalseDiscoveryRate.xml @ 9:7cc2a2687bff draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5
author galaxyp
date Wed, 15 May 2019 08:27:52 -0400
parents f13beb0ac55d
children 100359fb8e7c
line wrap: on
line diff
--- a/FalseDiscoveryRate.xml	Tue Mar 20 14:55:14 2018 -0400
+++ b/FalseDiscoveryRate.xml	Wed May 15 08:27:52 2019 -0400
@@ -10,7 +10,7 @@
   <expand macro="references"/>
   <expand macro="stdio"/>
   <expand macro="requirements"/>
-  <command>FalseDiscoveryRate
+  <command detect_errors="aggressive"><![CDATA[FalseDiscoveryRate
 
 #if $param_in:
   -in $param_in
@@ -60,7 +60,7 @@
   -force
 #end if
 #end if
-</command>
+]]></command>
   <inputs>
     <param name="param_in" type="data" format="idxml" optional="False" label="Identifications from searching a target-decoy database" help="(-in) "/>
     <param name="param_PSM" display="radio" type="select" optional="False" value="true" label="Perform FDR calculation on PSM level" help="(-PSM) ">
@@ -88,5 +88,5 @@
   <help>Estimates the false discovery rate on peptide and protein level using decoy searches.
 
 
-For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/TOPP_FalseDiscoveryRate.html</help>
+For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/TOPP_FalseDiscoveryRate.html</help>
 </tool>