Mercurial > repos > galaxyp > openms_featurefinderidentification

comparison FeatureFinderIdentification.xml @ 1:6a3bbd5b8cb6 draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 820d990f9217706e693b8a2f1da91e13c09cb0fb
author galaxyp
date Tue, 18 Apr 2017 16:04:04 -0400
parents 3a61c78033f0
children c040ffc3ac9b
comparison
equal deleted inserted replaced
0:3a61c78033f0 1:6a3bbd5b8cb6
29 #end if 29 #end if
30 #if $param_trafo_out: 30 #if $param_trafo_out:
31 -trafo_out $param_trafo_out 31 -trafo_out $param_trafo_out
32 #end if 32 #end if
33 #if $param_extract_reference_rt: 33 #if $param_extract_reference_rt:
34 -extract:reference_rt $param_extract_reference_rt 34 -extract:reference_rt
35 #if " " in str($param_extract_reference_rt):
36 "$param_extract_reference_rt"
37 #else
38 $param_extract_reference_rt
39 #end if
35 #end if 40 #end if
36 #if $param_extract_rt_window: 41 #if $param_extract_rt_window:
37 -extract:rt_window $param_extract_rt_window 42 -extract:rt_window $param_extract_rt_window
38 #end if 43 #end if
39 #if $param_extract_mz_window: 44 #if $param_extract_mz_window:
44 #end if 49 #end if
45 #if $param_detect_peak_width: 50 #if $param_detect_peak_width:
46 -detect:peak_width $param_detect_peak_width 51 -detect:peak_width $param_detect_peak_width
47 #end if 52 #end if
48 #if $param_model_type: 53 #if $param_model_type:
49 -model:type $param_model_type 54 -model:type
55 #if " " in str($param_model_type):
56 "$param_model_type"
57 #else
58 $param_model_type
59 #end if
50 #end if 60 #end if
51 #if $adv_opts.adv_opts_selector=='advanced': 61 #if $adv_opts.adv_opts_selector=='advanced':
52 #if $adv_opts.param_force: 62 #if $adv_opts.param_force:
53 -force 63 -force
54 #end if 64 #end if