Mercurial > repos > galaxyp > openms_fileconverter

diff FileConverter.xml @ 9:1a186cc82c8d draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5
author galaxyp
date Fri, 17 May 2019 04:46:09 -0400
parents 1fe84d73c19c
children f2388622d581
line wrap: on
line diff
--- a/FileConverter.xml	Tue Mar 20 15:10:44 2018 -0400
+++ b/FileConverter.xml	Fri May 17 04:46:09 2019 -0400
@@ -10,7 +10,7 @@
   <expand macro="references"/>
   <expand macro="stdio"/>
   <expand macro="requirements"/>
-  <command>FileConverter
+  <command detect_errors="aggressive"><![CDATA[FileConverter
 
 #if $param_in:
   -in $param_in
@@ -68,7 +68,7 @@
   -force
 #end if
 #end if
-</command>
+]]></command>
   <inputs>
     <param name="param_in" type="data" format="mzData,mzxml,mzml,cachedMzML,dta,dta2d,mgf,featurexml,consensusxml,ms2,fid,tabular,peplist,kroenik,tabular" optional="False" label="Input file to convert" help="(-in) "/>
     <expand macro="advanced_options">
@@ -109,5 +109,5 @@
   <help>Converts between different MS file formats.
 
 
-For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/TOPP_FileConverter.html</help>
+For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/TOPP_FileConverter.html</help>
 </tool>