Mercurial > repos > galaxyp > openms_idposteriorerrorprobability

annotate macros.xml @ 9:5d9f175dff81 draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5-dirty
author galaxyp
date Fri, 17 May 2019 10:24:45 -0400
parents 956891730b67
children 18ee86db4af2
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377d4fcad44e planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit fb85d488133bb2b5f483b52b2db0ac66038fafb8
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1 <?xml version='1.0' encoding='UTF-8'?>
377d4fcad44e planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit fb85d488133bb2b5f483b52b2db0ac66038fafb8
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2 <macros>
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3 <xml name="requirements">
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4 <requirements>
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5 <requirement type="package" version="2.3">openms</requirement>
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377d4fcad44e planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit fb85d488133bb2b5f483b52b2db0ac66038fafb8
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6 <requirement type="package" version="15.12.15.2">xtandem</requirement>
377d4fcad44e planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit fb85d488133bb2b5f483b52b2db0ac66038fafb8
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7 <requirement type="package" version="1.0">fido</requirement>
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8 <requirement type="package" version="2017.07.21">msgf_plus</requirement>
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9 <yield/>
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10 </requirements>
377d4fcad44e planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit fb85d488133bb2b5f483b52b2db0ac66038fafb8
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11 </xml>
377d4fcad44e planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit fb85d488133bb2b5f483b52b2db0ac66038fafb8
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12 <xml name="stdio">
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13 <stdio>
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5d9f175dff81 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5-dirty
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14 <regex match="Could not allocate metaspace" level="fatal_oom" description="Java memory Exception"/>
5d9f175dff81 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5-dirty
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15 <regex match="Cannot create VM thread" level="fatal_oom" description="Java memory Exception"/>
5d9f175dff81 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5-dirty
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16 <regex match="qUncompress: could not allocate enough memory to uncompress data" level="fatal_oom" description="Java memory Exception"/>
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377d4fcad44e planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit fb85d488133bb2b5f483b52b2db0ac66038fafb8
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17 </stdio>
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18 </xml>
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19 <xml name="references">
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20 <citations>
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21 <citation type="doi">doi:10.1186/1471-2105-9-163</citation>
377d4fcad44e planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit fb85d488133bb2b5f483b52b2db0ac66038fafb8
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22 </citations>
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23 </xml>
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24 <xml name="advanced_options">
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25 <conditional name="adv_opts">
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26 <param name="adv_opts_selector" type="select" label="Advanced Options">
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27 <option value="basic" selected="True">Hide Advanced Options</option>
377d4fcad44e planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit fb85d488133bb2b5f483b52b2db0ac66038fafb8
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28 <option value="advanced">Show Advanced Options</option>
377d4fcad44e planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit fb85d488133bb2b5f483b52b2db0ac66038fafb8
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29 </param>
377d4fcad44e planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit fb85d488133bb2b5f483b52b2db0ac66038fafb8
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30 <when value="basic"/>
377d4fcad44e planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit fb85d488133bb2b5f483b52b2db0ac66038fafb8
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31 <when value="advanced">
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32 <yield/>
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33 </when>
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34 </conditional>
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35 </xml>
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36 </macros>