Mercurial > repos > galaxyp > openms_openswathmzmlfilecacher

diff OpenSwathMzMLFileCacher.xml @ 7:b5121b003599 draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5
author galaxyp
date Wed, 15 May 2019 08:09:48 -0400
parents e1c2ee148254
children e7c43d17e3dc
line wrap: on
line diff
--- a/OpenSwathMzMLFileCacher.xml	Tue Mar 20 14:42:35 2018 -0400
+++ b/OpenSwathMzMLFileCacher.xml	Wed May 15 08:09:48 2019 -0400
@@ -10,7 +10,7 @@
   <expand macro="references"/>
   <expand macro="stdio"/>
   <expand macro="requirements"/>
-  <command>OpenSwathMzMLFileCacher
+  <command detect_errors="aggressive"><![CDATA[OpenSwathMzMLFileCacher
 
 #if $param_in:
   -in $param_in
@@ -34,7 +34,7 @@
   -force
 #end if
 #end if
-</command>
+]]></command>
   <inputs>
     <param name="param_in" type="data" format="mzml,sqMass" optional="False" label="Input mzML file" help="(-in) "/>
     <param name="param_out_type" display="radio" type="select" optional="True" label="Output file type -- default: determined from file extension or content &lt;br&gt;Note: that not all conversion paths work or make sense" help="(-out_type) ">
@@ -52,5 +52,5 @@
   <help>This tool caches the spectra and chromatogram data of an mzML to disk.
 
 
-For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_OpenSwathMzMLFileCacher.html</help>
+For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/UTILS_OpenSwathMzMLFileCacher.html</help>
 </tool>