Mercurial > repos > galaxyp > openms_ptmodel

comparison PTModel.xml @ 1:30ccca244091 draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 9a14ed1f2d3c9abdfb080251b3419dd9e0c52a14
author galaxyp
date Wed, 09 Aug 2017 09:21:36 -0400
parents 2b34b435c177
children a174f62788b7
comparison
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0:2b34b435c177 1:30ccca244091
1 <?xml version='1.0' encoding='UTF-8'?> 1 <?xml version='1.0' encoding='UTF-8'?>
2 <!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.--> 2 <!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.-->
3 <!--Proposed Tool Section: [Peptide property prediction]--> 3 <!--Proposed Tool Section: [Peptide property prediction]-->
4 <tool id="PTModel" name="PTModel" version="2.1.0"> 4 <tool id="PTModel" name="PTModel" version="2.2.0">
5 <description>Trains a model for the prediction of proteotypic peptides from a training set.</description> 5 <description>Trains a model for the prediction of proteotypic peptides from a training set.</description>
6 <macros> 6 <macros>
7 <token name="@EXECUTABLE@">PTModel</token> 7 <token name="@EXECUTABLE@">PTModel</token>
8 <import>macros.xml</import> 8 <import>macros.xml</import>
9 </macros> 9 </macros>
23 #end if 23 #end if
24 #if $param_c: 24 #if $param_c:
25 -c $param_c 25 -c $param_c
26 #end if 26 #end if
27 #if $param_svm_type: 27 #if $param_svm_type:
28 -svm_type $param_svm_type 28 -svm_type
29 #if " " in str($param_svm_type):
30 "$param_svm_type"
31 #else
32 $param_svm_type
33 #end if
29 #end if 34 #end if
30 #if $param_nu: 35 #if $param_nu:
31 -nu $param_nu 36 -nu $param_nu
32 #end if 37 #end if
33 #if $param_kernel_type: 38 #if $param_kernel_type:
34 -kernel_type $param_kernel_type 39 -kernel_type
40 #if " " in str($param_kernel_type):
41 "$param_kernel_type"
42 #else
43 $param_kernel_type
44 #end if
35 #end if 45 #end if
36 #if $param_degree: 46 #if $param_degree:
37 -degree $param_degree 47 -degree $param_degree
38 #end if 48 #end if
39 #if $param_border_length: 49 #if $param_border_length: