Mercurial > repos > galaxyp > openms_qcmerger

annotate QCMerger.xml @ 0:b2a0d4fa0282 draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit fb85d488133bb2b5f483b52b2db0ac66038fafb8
author galaxyp
date Wed, 01 Mar 2017 12:31:46 -0500
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b2a0d4fa0282 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit fb85d488133bb2b5f483b52b2db0ac66038fafb8
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1 <?xml version='1.0' encoding='UTF-8'?>
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2 <!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.-->
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3 <!--Proposed Tool Section: [Utilities]-->
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4 <tool id="QCMerger" name="QCMerger" version="2.1.0">
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5 <description>Merges two qcml files together.</description>
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6 <macros>
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7 <token name="@EXECUTABLE@">QCMerger</token>
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8 <import>macros.xml</import>
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9 </macros>
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10 <expand macro="references"/>
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11 <expand macro="stdio"/>
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12 <expand macro="requirements"/>
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13 <command>QCMerger
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14
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15 -in
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16 #for token in $param_in:
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17 $token
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18 #end for
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19 #if $param_out:
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20 -out $param_out
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21 #end if
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22 #if $param_setname:
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23 -setname "$param_setname"
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24 #end if
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25 #if $adv_opts.adv_opts_selector=='advanced':
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26 #if $adv_opts.param_force:
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27 -force
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28 #end if
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29 #end if
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30 </command>
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31 <inputs>
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32 <param name="param_in" type="data" format="qcml" multiple="true" optional="False" size="30" label="List of qcml files to be merged" help="(-in) ">
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33 <sanitizer>
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34 <valid initial="string.printable">
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35 <remove value="'"/>
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36 <remove value="&quot;"/>
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37 </valid>
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38 </sanitizer>
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39 </param>
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40 <param name="param_setname" type="text" size="30" label="Use only when all given qcml files belong to one set, which will be held under the given name" help="(-setname) ">
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41 <sanitizer>
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42 <valid initial="string.printable">
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43 <remove value="'"/>
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44 <remove value="&quot;"/>
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45 </valid>
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46 </sanitizer>
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47 </param>
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48 <expand macro="advanced_options">
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49 <param name="param_force" display="radio" type="boolean" truevalue="-force" falsevalue="" checked="false" optional="True" label="Overwrite tool specific checks" help="(-force) "/>
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50 </expand>
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51 </inputs>
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52 <outputs>
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53 <data name="param_out" format="qcml"/>
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54 </outputs>
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55 <help>Merges two qcml files together.
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56
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57
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58 For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_QCMerger.html</help>
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59 </tool>