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annotate XMLValidator.xml @ 5:b19fb08ca900 draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 58476cadaaf10b494317a604ad81d41c2d15f29b
author galaxyp
date Mon, 12 Feb 2018 13:06:21 -0500
parents 93093c6a0d45
children 68c2fe7ee7d4
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50629057c7fb planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit fb85d488133bb2b5f483b52b2db0ac66038fafb8
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1 <?xml version='1.0' encoding='UTF-8'?>
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2 <!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTDConverter.-->
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3 <!--Proposed Tool Section: [Utilities]-->
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4 <tool id="XMLValidator" name="XMLValidator" version="2.3.0">
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5 <description>Validates XML files against an XSD schema.</description>
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6 <macros>
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7 <token name="@EXECUTABLE@">XMLValidator</token>
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8 <import>macros.xml</import>
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9 </macros>
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10 <expand macro="references"/>
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11 <expand macro="stdio"/>
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12 <expand macro="requirements"/>
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13 <command>XMLValidator
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15 #if $param_in:
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16 -in $param_in
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17 #end if
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18 #if $param_schema:
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19 -schema $param_schema
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20 #end if
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21 #if $adv_opts.adv_opts_selector=='advanced':
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22 #if $adv_opts.param_force:
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23 -force
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24 #end if
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25 #end if
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26 &gt; $param_stdout
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27 </command>
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28 <inputs>
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29 <param name="param_in" type="data" format="mzml,mzData,featurexml,mzid,idxml,consensusxml,mzxml,txt,pepxml,traml,xml" optional="False" label="file to validate" help="(-in) "/>
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30 <param name="param_schema" type="data" format="txt" optional="True" label="schema to validate against" help="(-schema) &lt;br&gt;If no schema is given, the file is validated against the latest schema of the file type"/>
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31 <expand macro="advanced_options">
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32 <param name="param_force" display="radio" type="boolean" truevalue="-force" falsevalue="" checked="false" optional="True" label="Overwrite tool specific checks" help="(-force) "/>
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33 </expand>
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34 </inputs>
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35 <outputs>
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36 <data name="param_stdout" format="txt" label="Output from stdout"/>
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37 </outputs>
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38 <help>Validates XML files against an XSD schema.
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39
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41 For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_XMLValidator.html</help>
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42 </tool>