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comparison macros.xml @ 3:962599ac5406 draft default tip

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/pepquery commit d23b1d8800e98af81496332ff7c051f8f25c73f6"
author galaxyp
date Wed, 12 Jan 2022 15:34:37 +0000
parents 5b5a9f59e2c7
children
comparison
equal deleted inserted replaced
2:5b5a9f59e2c7 3:962599ac5406
1 <macros> 1 <macros>
2 <token name="@TOOL_VERSION@">1.6.2</token> 2 <token name="@TOOL_VERSION@">1.6.2</token>
3 <token name="@VERSION_SUFFIX@">0</token> 3 <token name="@VERSION_SUFFIX@">1</token>
4 <xml name="modifications"> 4 <xml name="modifications">
5 <option value="1">HexNAc of T (203.07937251951) modaa</option> 5 <option value="1">HexNAc of T (203.07937251951) modaa</option>
6 <option value="2">HexNAc of S (203.07937251951) modaa</option> 6 <option value="2">HexNAc of S (203.07937251951) modaa</option>
7 <option value="3">Propionyl of peptide N-term light (56.02621474784) modn_peptide</option> 7 <option value="3">Propionyl of peptide N-term light (56.02621474784) modn_peptide</option>
8 <option value="4">iTRAQ 8-plex of K (304.19903946116) modaa</option> 8 <option value="4">iTRAQ 8-plex of K (304.19903946116) modaa</option>
11 <option value="7">Dioxidation of M (31.98982923912) modaa</option> 11 <option value="7">Dioxidation of M (31.98982923912) modaa</option>
12 <option value="8">Guanidination of K (42.02179807374) modaa</option> 12 <option value="8">Guanidination of K (42.02179807374) modaa</option>
13 <option value="9">S-nitrosylation (28.99016359229) modaa</option> 13 <option value="9">S-nitrosylation (28.99016359229) modaa</option>
14 <option value="10">TMT 6-plex of K (229.16293213472) modaa</option> 14 <option value="10">TMT 6-plex of K (229.16293213472) modaa</option>
15 <option value="11">Propionyl of peptide N-term heavy (59.03627926124) modn_peptide</option> 15 <option value="11">Propionyl of peptide N-term heavy (59.03627926124) modn_peptide</option>
16 <option value="12">Formylation of protein N-term (27.99491461956) modn_protein</option> 16 <!-- <option value="12">Formylation of protein N-term (27.99491461956) modn_protein</option> -->
17 <option value="13">TMT 10-plex of K+6 (235.18306116152) modaa</option> 17 <option value="13">TMT 10-plex of K+6 (235.18306116152) modaa</option>
18 <option value="14">TMT 11-plex of K+6 (235.18306116152) modaa</option> 18 <option value="14">TMT 11-plex of K+6 (235.18306116152) modaa</option>
19 <option value="15">TMT 10-plex of K+8 (237.17713094832) modaa</option> 19 <option value="15">TMT 10-plex of K+8 (237.17713094832) modaa</option>
20 <option value="16">TMT 11-plex of K+4 (233.18803911764) modaa</option> 20 <option value="16">TMT 11-plex of K+4 (233.18803911764) modaa</option>
21 <option value="17">Diiodination of Y (251.79329593586) modaa</option> 21 <option value="17">Diiodination of Y (251.79329593586) modaa</option>
22 <option value="18">TMT 10-plex of K+4 (233.18803911764) modaa</option> 22 <option value="18">TMT 10-plex of K+4 (233.18803911764) modaa</option>
23 <option value="19">ICPL10 of peptide N-term (115.06669973029) modn_peptide</option> 23 <option value="19">ICPL10 of peptide N-term (115.06669973029) modn_peptide</option>
24 <option value="20">Amidation of the protein C-term (-0.9840155826899988) modc_protein</option> 24 <!-- <option value="20">Amidation of the protein C-term (-0.9840155826899988) modc_protein</option> -->
25 <option value="21">Acetylation of peptide N-term (42.0105646837) modn_peptide</option> 25 <option value="21">Acetylation of peptide N-term (42.0105646837) modn_peptide</option>
26 <option value="22">Palmitoylation of protein N-term (238.22966558166) modn_protein</option> 26 <!-- <option value="22">Palmitoylation of protein N-term (238.22966558166) modn_protein</option> -->
27 <option value="23">ICAT-O (227.12699141827) modaa</option> 27 <option value="23">ICAT-O (227.12699141827) modaa</option>
28 <option value="24">TMT 2-plex of peptide N-term (225.15583272792) modn_peptide</option> 28 <option value="24">TMT 2-plex of peptide N-term (225.15583272792) modn_peptide</option>
29 <option value="25">TMT 11-plex of K+8 (237.17713094832) modaa</option> 29 <option value="25">TMT 11-plex of K+8 (237.17713094832) modaa</option>
30 <option value="26">Label of K 2H(4) (4.025106982920001) modaa</option> 30 <option value="26">Label of K 2H(4) (4.025106982920001) modaa</option>
31 <option value="27">Isoleucine 13C(6) 15N(1) (7.017163920200005) modaa</option> 31 <option value="27">Isoleucine 13C(6) 15N(1) (7.017163920200005) modaa</option>
32 <option value="28">Arginine 13C(6) (6.020129026799992) modaa</option> 32 <option value="28">Arginine 13C(6) (6.020129026799992) modaa</option>
33 <option value="29">Acetylation of K (42.0105646837) modaa</option> 33 <option value="29">Acetylation of K (42.0105646837) modaa</option>
34 <option value="30">Dimethylation of peptide N-term 2H(6) 13C(2) (36.075670278260006) modn_peptide</option> 34 <option value="30">Dimethylation of peptide N-term 2H(6) 13C(2) (36.075670278260006) modn_peptide</option>
35 <option value="31">ICPL0 of K (105.02146372057) modaa</option> 35 <option value="31">ICPL0 of K (105.02146372057) modaa</option>
36 <option value="32">Trimethylation of protein N-term A (42.04695019242) modn_protein</option> 36 <!-- <option value="32">Trimethylation of protein N-term A (42.04695019242) modn_protein</option> -->
37 <option value="33">Thioacyl of peptide N-term (87.99828574784) modn_peptide</option> 37 <option value="33">Thioacyl of peptide N-term (87.99828574784) modn_peptide</option>
38 <option value="34">Trideuterated Methyl Ester of R (17.034480301330003) modaa</option> 38 <option value="34">Trideuterated Methyl Ester of R (17.034480301330003) modaa</option>
39 <option value="35">ICPL4 of peptide N-term (109.04657070349) modn_peptide</option> 39 <option value="35">ICPL4 of peptide N-term (109.04657070349) modn_peptide</option>
40 <option value="36">4-Hydroxyproline (83.07349929343) modaa</option> 40 <option value="36">4-Hydroxyproline (83.07349929343) modaa</option>
41 <option value="37">Hex(5) HexNAc(4) NeuAc(2) of N (2204.77244018348) modaa</option> 41 <option value="37">Hex(5) HexNAc(4) NeuAc(2) of N (2204.77244018348) modaa</option>
69 <option value="65">Homoserine of peptide C-term M (-29.992806444580005) modcaa_peptide</option> 69 <option value="65">Homoserine of peptide C-term M (-29.992806444580005) modcaa_peptide</option>
70 <option value="66">Proline 13C(5) (5.016774189000003) modaa</option> 70 <option value="66">Proline 13C(5) (5.016774189000003) modaa</option>
71 <option value="67">Farnesylation of C (204.18780076968) modaa</option> 71 <option value="67">Farnesylation of C (204.18780076968) modaa</option>
72 <option value="68">Trimethylation of K (42.04695019242) modaa</option> 72 <option value="68">Trimethylation of K (42.04695019242) modaa</option>
73 <option value="69">iTRAQ 8-plex of peptide N-term (304.19903946116) modn_peptide</option> 73 <option value="69">iTRAQ 8-plex of peptide N-term (304.19903946116) modn_peptide</option>
74 <option value="70">FormylMet of protein N-term (159.03539953255) modn_protein</option> 74 <!-- <option value="70">FormylMet of protein N-term (159.03539953255) modn_protein</option> -->
75 <option value="71">Dimethylation of K (28.03130012828) modaa</option> 75 <option value="71">Dimethylation of K (28.03130012828) modaa</option>
76 <option value="72">mTRAQ of K 13C(3) 15N (144.1020624208) modaa</option> 76 <option value="72">mTRAQ of K 13C(3) 15N (144.1020624208) modaa</option>
77 <option value="73">Carboxymethylation of C (58.00547930326) modaa</option> 77 <option value="73">Carboxymethylation of C (58.00547930326) modaa</option>
78 <option value="74">Guanidination of peptide N-term (42.02179807374) modn_peptide</option> 78 <option value="74">Guanidination of peptide N-term (42.02179807374) modn_peptide</option>
79 <option value="75">Acetylation of protein N-term (42.0105646837) modn_protein</option> 79 <!-- <option value="75">Acetylation of protein N-term (42.0105646837) modn_protein</option> -->
80 <option value="76">Trimethylation of R (42.04695019242) modaa</option> 80 <option value="76">Trimethylation of R (42.04695019242) modaa</option>
81 <option value="77">Pyrolidone from E (-18.0105646837) modnaa_peptide</option> 81 <option value="77">Pyrolidone from E (-18.0105646837) modnaa_peptide</option>
82 <option value="78">Dimethylation of R (28.03130012828) modaa</option> 82 <option value="78">Dimethylation of R (28.03130012828) modaa</option>
83 <option value="79">TMT 2-plex of K (225.15583272792) modaa</option> 83 <option value="79">TMT 2-plex of K (225.15583272792) modaa</option>
84 <option value="80">Pyrolidone from Q (-17.02654910101) modnaa_peptide</option> 84 <option value="80">Pyrolidone from Q (-17.02654910101) modnaa_peptide</option>
110 <option value="106">Sulfation of S (79.95681485867999) modaa</option> 110 <option value="106">Sulfation of S (79.95681485867999) modaa</option>
111 <option value="107">Sulfation of T (79.95681485867999) modaa</option> 111 <option value="107">Sulfation of T (79.95681485867999) modaa</option>
112 <option value="108">TMT 10-plex of K (229.16293213472) modaa</option> 112 <option value="108">TMT 10-plex of K (229.16293213472) modaa</option>
113 <option value="109">Oxidation of C (15.99491461956) modaa</option> 113 <option value="109">Oxidation of C (15.99491461956) modaa</option>
114 <option value="110">Amidation of the peptide C-term (-0.9840155826899988) modc_peptide</option> 114 <option value="110">Amidation of the peptide C-term (-0.9840155826899988) modc_peptide</option>
115 <option value="111">Carbamilation of protein N-term (43.00581365643) modn_protein</option> 115 <!-- <option value="111">Carbamilation of protein N-term (43.00581365643) modn_protein</option> -->
116 <option value="112">ICPL6 of K (111.04159274737) modaa</option> 116 <option value="112">ICPL6 of K (111.04159274737) modaa</option>
117 <option value="113">Propionamide of peptide N-term (71.03711378471) modn_peptide</option> 117 <option value="113">Propionamide of peptide N-term (71.03711378471) modn_peptide</option>
118 <option value="114">Phosphorylation of Y (79.96633052074999) modaa</option> 118 <option value="114">Phosphorylation of Y (79.96633052074999) modaa</option>
119 <option value="115">Didehydro of T (-2.01565006414) modaa</option> 119 <option value="115">Didehydro of T (-2.01565006414) modaa</option>
120 <option value="116">Oxidation of K (15.99491461956) modaa</option> 120 <option value="116">Oxidation of K (15.99491461956) modaa</option>