annotate test-data/result_2.json @ 0:1e5400393797 draft default tip

"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
author galaxyp
date Sun, 04 Jul 2021 21:26:08 +0000
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
1
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
2
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
3 {
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
4 "Name": "galaxy",
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
5 "ParseProteinIDRegexPattern": "id",
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
6 "Protease": { "Case": "Trypsin" },
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
7 "MinMissedCleavages": 0,
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
8 "MaxMissedCleavages": 2,
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
9 "MaxMass": 15000.0,
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
10 "MinPepLength": 4,
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
11 "MaxPepLength": 65,
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
12 "IsotopicMod": [
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
13 {"Case":"N15"}
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
14 ],
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
15 "MassMode": {
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
16 "Case": "Monoisotopic"
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
17 },
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
18 "FixedMods": [
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
19 {"Case":"Acetylation'ProtNTerm'"},
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
20 {"Case":"Carbamidomethyl'Cys'"},
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
21 {"Case":"Oxidation'Met'"},
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
22 {"Case":"Phosphorylation'Ser'Thr'Tyr'"},
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
23 {"Case":"Pyro_Glu'GluNterm'"},
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
24 {"Case":"Pyro_Glu'GlnNterm'"}
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
25 ],
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
26 "VariableMods": [
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
27 {"Case":"Acetylation'ProtNTerm'"},
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
28 {"Case":"Carbamidomethyl'Cys'"},
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
29 {"Case":"Oxidation'Met'"},
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
30 {"Case":"Phosphorylation'Ser'Thr'Tyr'"},
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
31 {"Case":"Pyro_Glu'GluNterm'"},
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
32 {"Case":"Pyro_Glu'GlnNterm'"}
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
33 ],
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
34 "VarModThreshold": 4
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
35 }
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
36
1e5400393797 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
galaxyp
parents:
diff changeset
37